RNA–Protein interactions for RNA: ENST00000558223.5

MARK3-212, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 908 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-212ENST00000558223 NUDT13Q86X67 352 aa6.74□□□□□ -1.33
MARK3-212ENST00000558223 PSD4Q8NDX1 1056 aa6.74□□□□□ -1.33
MARK3-212ENST00000558223 OR2L8Q8NGY9 312 aa6.74□□□□□ -1.33
MARK3-212ENST00000558223 RAB2BQ8WUD1 216 aa6.74□□□□□ -1.33
MARK3-212ENST00000558223 RAB40AQ8WXH6 277 aa6.74□□□□□ -1.33
MARK3-212ENST00000558223 FCGR1BQ92637 280 aa6.74□□□□□ -1.33
MARK3-212ENST00000558223 EGLN2Q96KS0 407 aa6.74□□□□□ -1.33
MARK3-212ENST00000558223 TRIB1Q96RU8 372 aa6.74□□□□□ -1.33
MARK3-212ENST00000558223 DOK1Q99704 481 aa6.74□□□□□ -1.33
MARK3-212ENST00000558223 GABRG3Q99928 467 aa6.74□□□□□ -1.33
MARK3-212ENST00000558223 PSD2Q9BQI7 771 aa6.74□□□□□ -1.33
MARK3-212ENST00000558223 EBPLQ9BY08 206 aa6.74□□□□□ -1.33
MARK3-212ENST00000558223 TOR3AQ9H497 397 aa6.74□□□□□ -1.33
MARK3-212ENST00000558223 C8orf33Q9H7E9 229 aaPredicted RBP6.74□□□□□ -1.33
MARK3-212ENST00000558223 CXorf36Q9H7Y0 433 aa6.74□□□□□ -1.33
MARK3-212ENST00000558223 CXorf21Q9HAI6 301 aa6.74□□□□□ -1.33
MARK3-212ENST00000558223 POLE3Q9NRF9 147 aa6.74□□□□□ -1.33
MARK3-212ENST00000558223 THSD1Q9NS62 852 aa6.74□□□□□ -1.33
MARK3-212ENST00000558223 ETAA1Q9NY74 926 aa6.74□□□□□ -1.33
MARK3-212ENST00000558223 EXTL2Q9UBQ6 330 aa6.74□□□□□ -1.33
MARK3-212ENST00000558223 MBD1Q9UIS9 605 aaPredicted RBP6.74□□□□□ -1.33
MARK3-212ENST00000558223 PSME2Q9UL46 239 aa6.74□□□□□ -1.33
MARK3-212ENST00000558223 SNX7Q9UNH6 387 aa6.74□□□□□ -1.33
MARK3-212ENST00000558223 ITM2BQ9Y287 266 aa6.74□□□□□ -1.33
MARK3-212ENST00000558223 SLC17A4Q9Y2C5 497 aa6.74□□□□□ -1.33
MARK3-212ENST00000558223 PLXNA2O75051 1894 aa6.74□□□□□ -1.33
MARK3-212ENST00000558223 NUP210Q8TEM1 1887 aaPredicted RBP6.74□□□□□ -1.33
MARK3-212ENST00000558223 UTRNP46939 3433 aa6.73□□□□□ -1.33
MARK3-212ENST00000558223 A0A1W2PQF6 199 aa6.73□□□□□ -1.33
MARK3-212ENST00000558223 IGLON5A6NGN9 336 aa6.73□□□□□ -1.33
MARK3-212ENST00000558223 BCKDKO14874 412 aa6.73□□□□□ -1.33
MARK3-212ENST00000558223 PLRG1O43660 514 aaKnown RBP6.73□□□□□ -1.33
MARK3-212ENST00000558223 SERPINB7O75635 380 aa6.73□□□□□ -1.33
MARK3-212ENST00000558223 TGFB1P01137 390 aa6.73□□□□□ -1.33
MARK3-212ENST00000558223 PCCBP05166 539 aa6.73□□□□□ -1.33
MARK3-212ENST00000558223 KLK1P06870 262 aa6.73□□□□□ -1.33
MARK3-212ENST00000558223 VSIG10L2P0DP72 767 aa6.73□□□□□ -1.33
MARK3-212ENST00000558223 TMEM11P17152 192 aa6.73□□□□□ -1.33
MARK3-212ENST00000558223 CRHBPP24387 322 aa6.73□□□□□ -1.33
MARK3-212ENST00000558223 DCKP27707 260 aa6.73□□□□□ -1.33
MARK3-212ENST00000558223 CHI3L1P36222 383 aaPredicted RBP6.73□□□□□ -1.33
MARK3-212ENST00000558223 CDKN2CP42773 168 aa6.73□□□□□ -1.33
MARK3-212ENST00000558223 CRATP43155 626 aa6.73□□□□□ -1.33
MARK3-212ENST00000558223 CAMPP49913 170 aa6.73□□□□□ -1.33
MARK3-212ENST00000558223 ZNF134P52741 427 aa6.73□□□□□ -1.33
MARK3-212ENST00000558223 HMGA2P52926 109 aa6.73□□□□□ -1.33
MARK3-212ENST00000558223 TAS2R50P59544 299 aa6.73□□□□□ -1.33
MARK3-212ENST00000558223 KIAA1024LP59773 190 aa6.73□□□□□ -1.33
MARK3-212ENST00000558223 CDK6Q00534 326 aa6.73□□□□□ -1.33
MARK3-212ENST00000558223 RELAQ04206 551 aa6.73□□□□□ -1.33
MARK3-212ENST00000558223 COX10Q12887 443 aa6.73□□□□□ -1.33
MARK3-212ENST00000558223 CBFBQ13951 182 aa6.73□□□□□ -1.33
MARK3-212ENST00000558223 POM121L1PQ3SYA9 428 aa6.73□□□□□ -1.33
MARK3-212ENST00000558223 GTDC1Q4AE62 458 aa6.73□□□□□ -1.33
MARK3-212ENST00000558223 CCSMST1Q4G0I0 132 aa6.73□□□□□ -1.33
MARK3-212ENST00000558223 LRRC23Q53EV4 343 aaPredicted RBP6.73□□□□□ -1.33
MARK3-212ENST00000558223 ZNF648Q5T619 568 aaPredicted RBP6.73□□□□□ -1.33
MARK3-212ENST00000558223 AGBL4Q5VU57 503 aa6.73□□□□□ -1.33
MARK3-212ENST00000558223 ZNF691Q5VV52 312 aa6.73□□□□□ -1.33
MARK3-212ENST00000558223 PRAMEF8Q5VWM4 474 aa6.73□□□□□ -1.33
MARK3-212ENST00000558223 MLIPQ5VWP3 458 aa6.73□□□□□ -1.33
MARK3-212ENST00000558223 PRAMEF7Q5VXH5 474 aa6.73□□□□□ -1.33
MARK3-212ENST00000558223 KDM4DQ6B0I6 523 aa6.73□□□□□ -1.33
MARK3-212ENST00000558223 REEP3Q6NUK4 255 aa6.73□□□□□ -1.33
MARK3-212ENST00000558223 KIAA1324Q6UXG2 1013 aaKnown RBP6.73□□□□□ -1.33
MARK3-212ENST00000558223 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP6.73□□□□□ -1.33
MARK3-212ENST00000558223 TMEM64Q6YI46 380 aa6.73□□□□□ -1.33
MARK3-212ENST00000558223 CYP4Z1Q86W10 505 aa6.73□□□□□ -1.33
MARK3-212ENST00000558223 ANKRD46Q86W74 232 aa6.73□□□□□ -1.33
MARK3-212ENST00000558223 PTOV1Q86YD1 416 aa6.73□□□□□ -1.33
MARK3-212ENST00000558223 C12orf76Q8N812 135 aaPredicted RBP6.73□□□□□ -1.33
MARK3-212ENST00000558223 FAM216AQ8WUB2 273 aa6.73□□□□□ -1.33
MARK3-212ENST00000558223 GEMIN6Q8WXD5 167 aaKnown RBP6.73□□□□□ -1.33
MARK3-212ENST00000558223 FKBP10Q96AY3 582 aa6.73□□□□□ -1.33
MARK3-212ENST00000558223 MUS81Q96NY9 551 aa6.73□□□□□ -1.33
MARK3-212ENST00000558223 TEFMQ96QE5 360 aaKnown RBP6.73□□□□□ -1.33
MARK3-212ENST00000558223 ZNF607Q96SK3 696 aa6.73□□□□□ -1.33
MARK3-212ENST00000558223 SLC35A5Q9BS91 424 aa6.73□□□□□ -1.33
MARK3-212ENST00000558223 PTDSS2Q9BVG9 487 aa6.73□□□□□ -1.33
MARK3-212ENST00000558223 NPLQ9BXD5 320 aaPredicted RBP6.73□□□□□ -1.33
MARK3-212ENST00000558223 MS4A8Q9BY19 250 aa6.73□□□□□ -1.33
MARK3-212ENST00000558223 SLC17A9Q9BYT1 436 aa6.73□□□□□ -1.33
MARK3-212ENST00000558223 HRH4Q9H3N8 390 aa6.73□□□□□ -1.33
MARK3-212ENST00000558223 IKZF5Q9H5V7 419 aa6.73□□□□□ -1.33
MARK3-212ENST00000558223 DDX31Q9H8H2 851 aaKnown RBP6.73□□□□□ -1.33
MARK3-212ENST00000558223 TRIM45Q9H8W5 580 aaPredicted RBP6.73□□□□□ -1.33
MARK3-212ENST00000558223 ZNF556Q9HAH1 456 aa6.73□□□□□ -1.33
MARK3-212ENST00000558223 SLC28A3Q9HAS3 691 aa6.73□□□□□ -1.33
MARK3-212ENST00000558223 GCM1Q9NP62 436 aa6.73□□□□□ -1.33
MARK3-212ENST00000558223 OR6C2Q9NZP2 312 aa6.73□□□□□ -1.33
MARK3-212ENST00000558223 ANKMY1Q9P2S6 941 aa6.73□□□□□ -1.33
MARK3-212ENST00000558223 NDRG4Q9ULP0 352 aaKnown RBP6.73□□□□□ -1.33
MARK3-212ENST00000558223 SAMHD1Q9Y3Z3 626 aaKnown RBP6.73□□□□□ -1.33
MARK3-212ENST00000558223 C5orf58C9J3I9 102 aa6.72□□□□□ -1.33
MARK3-212ENST00000558223 MID1O15344 667 aa6.72□□□□□ -1.33
MARK3-212ENST00000558223 TPPPO94811 219 aa6.72□□□□□ -1.33
MARK3-212ENST00000558223 OXSR1O95747 527 aaPredicted RBP6.72□□□□□ -1.33
MARK3-212ENST00000558223 OPN1MWP04001 364 aa6.72□□□□□ -1.33
MARK3-212ENST00000558223 OPN1MW2P0DN77 364 aa6.72□□□□□ -1.33
MARK3-212ENST00000558223 OPN1MW3P0DN78 364 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms