RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 OLIG3Q7RTU3 272 aa23.33■■□□□ 1.33
SMAD6-202ENST00000557916 FAM109AQ8N4B1 249 aa23.33■■□□□ 1.33
SMAD6-202ENST00000557916 GPR137Q96N19 417 aa23.33■■□□□ 1.33
SMAD6-202ENST00000557916 DEFB127Q9H1M4 99 aa23.33■■□□□ 1.33
SMAD6-202ENST00000557916 SDHAF3Q9NRP4 125 aa23.33■■□□□ 1.33
SMAD6-202ENST00000557916 LIPT1Q9Y234 373 aa23.33■■□□□ 1.33
SMAD6-202ENST00000557916 SHANK1Q9Y566 2161 aa23.33■■□□□ 1.33
SMAD6-202ENST00000557916 ALG1L2C9J202 215 aa23.33■■□□□ 1.32
SMAD6-202ENST00000557916 FCMRO60667 390 aa23.33■■□□□ 1.32
SMAD6-202ENST00000557916 PLA2G2AP14555 144 aa23.33■■□□□ 1.32
SMAD6-202ENST00000557916 DSTNP60981 165 aa23.33■■□□□ 1.32
SMAD6-202ENST00000557916 GPAT3Q53EU6 434 aa23.33■■□□□ 1.32
SMAD6-202ENST00000557916 KRTCAP3Q53RY4 240 aa23.33■■□□□ 1.32
SMAD6-202ENST00000557916 CMPK2Q5EBM0 449 aa23.33■■□□□ 1.32
SMAD6-202ENST00000557916 REP15Q6BDI9 236 aa23.33■■□□□ 1.32
SMAD6-202ENST00000557916 ATCAYQ86WG3 371 aa23.33■■□□□ 1.32
SMAD6-202ENST00000557916 POU5F2Q8N7G0 328 aa23.33■■□□□ 1.32
SMAD6-202ENST00000557916 WDSUB1Q8N9V3 476 aa23.33■■□□□ 1.32
SMAD6-202ENST00000557916 GALNT11Q8NCW6 608 aa23.33■■□□□ 1.32
SMAD6-202ENST00000557916 ST6GALNAC3Q8NDV1 305 aa23.33■■□□□ 1.32
SMAD6-202ENST00000557916 RP9Q8TA86 221 aaKnown RBP23.33■■□□□ 1.32
SMAD6-202ENST00000557916 CGREF1Q99674 301 aa23.33■■□□□ 1.32
SMAD6-202ENST00000557916 RTN4RQ9BZR6 473 aa23.33■■□□□ 1.32
SMAD6-202ENST00000557916 ZNF350Q9GZX5 532 aa23.33■■□□□ 1.32
SMAD6-202ENST00000557916 ZNF703Q9H7S9 590 aaPredicted RBP23.33■■□□□ 1.32
SMAD6-202ENST00000557916 ZDHHC11Q9H8X9 412 aa23.33■■□□□ 1.32
SMAD6-202ENST00000557916 SEC14L3Q9UDX4 400 aa23.33■■□□□ 1.32
SMAD6-202ENST00000557916 C15orf41Q9Y2V0 281 aa23.33■■□□□ 1.32
SMAD6-202ENST00000557916 GMEB1Q9Y692 573 aa23.33■■□□□ 1.32
SMAD6-202ENST00000557916 NPIPA5A0A0B4J1W7 369 aa23.32■■□□□ 1.32
SMAD6-202ENST00000557916 NPIPA7E9PJI5 369 aa23.32■■□□□ 1.32
SMAD6-202ENST00000557916 SCDO00767 359 aa23.32■■□□□ 1.32
SMAD6-202ENST00000557916 ADAM10O14672 748 aa23.32■■□□□ 1.32
SMAD6-202ENST00000557916 CBX6O95503 412 aa23.32■■□□□ 1.32
SMAD6-202ENST00000557916 ANGPTL1O95841 491 aa23.32■■□□□ 1.32
SMAD6-202ENST00000557916 NPIPA8P0DM63 369 aa23.32■■□□□ 1.32
SMAD6-202ENST00000557916 DCTP40126 519 aa23.32■■□□□ 1.32
SMAD6-202ENST00000557916 FADDQ13158 208 aa23.32■■□□□ 1.32
SMAD6-202ENST00000557916 GPR68Q15743 365 aa23.32■■□□□ 1.32
SMAD6-202ENST00000557916 SYPL1Q16563 259 aa23.32■■□□□ 1.32
SMAD6-202ENST00000557916 RUNDC3AQ59EK9 446 aa23.32■■□□□ 1.32
SMAD6-202ENST00000557916 OR5M10Q6IEU7 315 aa23.32■■□□□ 1.32
SMAD6-202ENST00000557916 PLCZ1Q86YW0 608 aa23.32■■□□□ 1.32
SMAD6-202ENST00000557916 TREML1Q86YW5 311 aa23.32■■□□□ 1.32
SMAD6-202ENST00000557916 ANKFN1Q8N957 763 aa23.32■■□□□ 1.32
SMAD6-202ENST00000557916 ZNF527Q8NB42 609 aa23.32■■□□□ 1.32
SMAD6-202ENST00000557916 TRNT1Q96Q11 434 aaKnown RBP23.32■■□□□ 1.32
SMAD6-202ENST00000557916 POLE3Q9NRF9 147 aa23.32■■□□□ 1.32
SMAD6-202ENST00000557916 THUMPD1Q9NXG2 353 aaKnown RBP23.32■■□□□ 1.32
SMAD6-202ENST00000557916 PPP4R1LQ9P1A2 415 aa23.32■■□□□ 1.32
SMAD6-202ENST00000557916 MKLN1Q9UL63 735 aa23.32■■□□□ 1.32
SMAD6-202ENST00000557916 NBASA2RRP1 2371 aa23.32■■□□□ 1.32
SMAD6-202ENST00000557916 EVPLLA8MZ36 301 aa23.31■■□□□ 1.32
SMAD6-202ENST00000557916 MRASO14807 208 aa23.31■■□□□ 1.32
SMAD6-202ENST00000557916 GUSBP08236 651 aa23.31■■□□□ 1.32
SMAD6-202ENST00000557916 NR2F1P10589 423 aa23.31■■□□□ 1.32
SMAD6-202ENST00000557916 COX4I1P13073 169 aa23.31■■□□□ 1.32
SMAD6-202ENST00000557916 GDF1P27539 372 aa23.31■■□□□ 1.32
SMAD6-202ENST00000557916 ATP12AP54707 1039 aa23.31■■□□□ 1.32
SMAD6-202ENST00000557916 HPCAP84074 193 aa23.31■■□□□ 1.32
SMAD6-202ENST00000557916 SLC10A1Q14973 349 aa23.31■■□□□ 1.32
SMAD6-202ENST00000557916 TRMT5Q32P41 509 aaKnown RBP23.31■■□□□ 1.32
SMAD6-202ENST00000557916 GKAP1Q5VSY0 366 aaPredicted RBP23.31■■□□□ 1.32
SMAD6-202ENST00000557916 DUSP19Q8WTR2 217 aa23.31■■□□□ 1.32
SMAD6-202ENST00000557916 ANKRD27Q96NW4 1050 aa23.31■■□□□ 1.32
SMAD6-202ENST00000557916 IKZF5Q9H5V7 419 aa23.31■■□□□ 1.32
SMAD6-202ENST00000557916 QPCTLQ9NXS2 382 aa23.31■■□□□ 1.32
SMAD6-202ENST00000557916 P2RX2Q9UBL9 471 aa23.31■■□□□ 1.32
SMAD6-202ENST00000557916 CORO2BQ9UQ03 480 aa23.31■■□□□ 1.32
SMAD6-202ENST00000557916 WDR45Q9Y484 360 aa23.31■■□□□ 1.32
SMAD6-202ENST00000557916 HRH3Q9Y5N1 445 aa23.31■■□□□ 1.32
SMAD6-202ENST00000557916 C17orf51A8MQB3 221 aa23.3■■□□□ 1.32
SMAD6-202ENST00000557916 NPIPB9F8W1W9 429 aa23.3■■□□□ 1.32
SMAD6-202ENST00000557916 PYCARD-AS1I3L0S3 204 aa23.3■■□□□ 1.32
SMAD6-202ENST00000557916 NDUFB5O43674 189 aa23.3■■□□□ 1.32
SMAD6-202ENST00000557916 CBR3O75828 277 aa23.3■■□□□ 1.32
SMAD6-202ENST00000557916 ZIC2O95409 532 aaPredicted RBP23.3■■□□□ 1.32
SMAD6-202ENST00000557916 H6PDO95479 791 aa23.3■■□□□ 1.32
SMAD6-202ENST00000557916 CELA3AP09093 270 aa23.3■■□□□ 1.32
SMAD6-202ENST00000557916 TYW3Q6IPR3 259 aaKnown RBP23.3■■□□□ 1.32
SMAD6-202ENST00000557916 GFRALQ6UXV0 394 aa23.3■■□□□ 1.32
SMAD6-202ENST00000557916 PCYOX1LQ8NBM8 494 aa23.3■■□□□ 1.32
SMAD6-202ENST00000557916 CPPED1Q9BRF8 314 aaPredicted RBP23.3■■□□□ 1.32
SMAD6-202ENST00000557916 SAP130Q9H0E3 1048 aa23.3■■□□□ 1.32
SMAD6-202ENST00000557916 UBQLN3Q9H347 655 aa23.3■■□□□ 1.32
SMAD6-202ENST00000557916 A0A1W2PQD3 144 aa23.29■■□□□ 1.32
SMAD6-202ENST00000557916 ANKUB1A6NFN9 424 aa23.29■■□□□ 1.32
SMAD6-202ENST00000557916 CDC40O60508 579 aaKnown RBP eCLIP23.29■■□□□ 1.32
SMAD6-202ENST00000557916 TRAPPC6AO75865 159 aa23.29■■□□□ 1.32
SMAD6-202ENST00000557916 PDE9AO76083 593 aa23.29■■□□□ 1.32
SMAD6-202ENST00000557916 GPX2P18283 190 aa23.29■■□□□ 1.32
SMAD6-202ENST00000557916 CHRNEQ04844 493 aa23.29■■□□□ 1.32
SMAD6-202ENST00000557916 C17orf67Q0P5P2 114 aa23.29■■□□□ 1.32
SMAD6-202ENST00000557916 ELOAQ14241 798 aaKnown RBP23.29■■□□□ 1.32
SMAD6-202ENST00000557916 CAPRIN1Q14444 709 aaKnown RBP23.29■■□□□ 1.32
SMAD6-202ENST00000557916 TOMM20Q15388 145 aa23.29■■□□□ 1.32
SMAD6-202ENST00000557916 KLHL26Q53HC5 615 aa23.29■■□□□ 1.32
SMAD6-202ENST00000557916 AP1ARQ63HQ0 302 aa23.29■■□□□ 1.32
SMAD6-202ENST00000557916 FRRS1Q6ZNA5 592 aa23.29■■□□□ 1.32
SMAD6-202ENST00000557916 LRRC74BQ6ZQY2 392 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms