RNA–Protein interactions for RNA: ENST00000557470.5

VPS33B-207, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 5

Gene VPS33B, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-207ENST00000557470 NRG3P56975 720 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 RPS13P62277 151 aaKnown RBP5.28□□□□□ -1.56
VPS33B-207ENST00000557470 RPP38P78345 283 aaKnown RBP5.28□□□□□ -1.56
VPS33B-207ENST00000557470 TNK1Q13470 666 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 GAB1Q13480 694 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 LAPTM5Q13571 262 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 DDX39BQ13838 428 aaKnown RBP5.28□□□□□ -1.56
VPS33B-207ENST00000557470 E2F2Q14209 437 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 OR4D1Q15615 310 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 TBCCQ15814 346 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 NNATQ16517 81 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 CYP1B1Q16678 543 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 TSTQ16762 297 aaKnown RBP5.28□□□□□ -1.56
VPS33B-207ENST00000557470 HIST2H2ACQ16777 129 aaPredicted RBP5.28□□□□□ -1.56
VPS33B-207ENST00000557470 C3orf36Q3SXR2 165 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 KBTBD12Q3ZCT8 623 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 PAGE2BQ5JRK9 111 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 HLA-DQA1Q5Y7H0 255 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 STEAP4Q687X5 459 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 HIST2H2AA3Q6FI13 130 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 SULT1C3Q6IMI6 304 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 HEPHL1Q6MZM0 1159 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 VWA1Q6PCB0 445 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 ENPP6Q6UWR7 440 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 PLEKHM3Q6ZWE6 761 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 GPSM1Q86YR5 675 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 LAS2Q8IYD9 372 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 TCAIMQ8N3R3 496 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 ZCCHC7Q8N3Z6 543 aaKnown RBP5.28□□□□□ -1.56
VPS33B-207ENST00000557470 ZNF615Q8N8J6 731 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 CNEP1R1Q8N9A8 125 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 OR7G3Q8NG95 312 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 OR14L1PQ8NHC6 308 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 CEP70Q8NHQ1 597 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 RDH11Q8TC12 318 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 TMEM158Q8WZ71 300 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 ST8SIA4Q92187 359 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 HGDQ93099 445 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 UCN3Q969E3 161 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 CMTM7Q96FZ5 175 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 MS4A14Q96JA4 679 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 NODALQ96S42 347 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 KCNJ15Q99712 375 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 MCMBPQ9BTE3 642 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 OSBPL11Q9BXB4 747 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 ASPNQ9BXN1 380 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 ZNF717Q9BY31 904 aaPredicted RBP5.28□□□□□ -1.56
VPS33B-207ENST00000557470 OR2B2Q9GZK3 357 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 DERL2Q9GZP9 239 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 NXF5Q9H1B4 397 aaKnown RBP5.28□□□□□ -1.56
VPS33B-207ENST00000557470 OPN3Q9H1Y3 402 aaPredicted RBP5.28□□□□□ -1.56
VPS33B-207ENST00000557470 OR10A5Q9H207 317 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 ACTR8Q9H981 624 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 CXorf21Q9HAI6 301 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 ZNF701Q9NV72 531 aaPredicted RBP5.28□□□□□ -1.56
VPS33B-207ENST00000557470 HEY2Q9UBP5 337 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 TBK1Q9UHD2 729 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 ADGRE2Q9UHX3 823 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 PTBP2Q9UKA9 531 aaKnown RBP5.28□□□□□ -1.56
VPS33B-207ENST00000557470 C19orf53Q9UNZ5 99 aaPredicted RBP5.28□□□□□ -1.56
VPS33B-207ENST00000557470 EXO1Q9UQ84 846 aaKnown RBP5.28□□□□□ -1.56
VPS33B-207ENST00000557470 CHMP2BQ9UQN3 213 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 DTX4Q9Y2E6 619 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 ATP23Q9Y6H3 246 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 ABCA1O95477 2261 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 ANK2Q01484 3957 aa5.28□□□□□ -1.56
VPS33B-207ENST00000557470 EXPH5Q8NEV8 1989 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 A0A087X1B8 175 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 A0A0A6YYD5 115 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 AQP12BA6NM10 295 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 C16orf97H3BN30 126 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 DNALI1O14645 258 aaPredicted RBP5.27□□□□□ -1.57
VPS33B-207ENST00000557470 PGRMC2O15173 223 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 HCRTR2O43614 444 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 TMPRSS11DO60235 418 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 ICOSLGO75144 302 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 CDH16O75309 829 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 PTP4A3O75365 173 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 CBR3O75828 277 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 PIAS1O75925 651 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 WISP3O95389 354 aaPredicted RBP5.27□□□□□ -1.57
VPS33B-207ENST00000557470 TGDSO95455 350 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 IFNA2P01563 188 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 CRHP06850 196 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 CD3EP07766 207 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 RHOXF2BP0C7M4 288 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 POU2F1P14859 743 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 PORP16435 677 aaPredicted RBP5.27□□□□□ -1.57
VPS33B-207ENST00000557470 ZNF708P17019 499 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 GPX3P22352 226 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 SERPINB1P30740 379 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 NTF4P34130 210 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 KIR2DL2P43627 348 aaPredicted RBP5.27□□□□□ -1.57
VPS33B-207ENST00000557470 TPD52P55327 224 aaPredicted RBP5.27□□□□□ -1.57
VPS33B-207ENST00000557470 EEF1A1P68104 462 aaKnown RBP5.27□□□□□ -1.57
VPS33B-207ENST00000557470 SIRPAP78324 504 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 MRPS35P82673 323 aaKnown RBP5.27□□□□□ -1.57
VPS33B-207ENST00000557470 MGAT5Q09328 741 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 FUT7Q11130 342 aa5.27□□□□□ -1.57
VPS33B-207ENST00000557470 TMED1Q13445 227 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms