RNA–Protein interactions for RNA: ENST00000556951.5

PSEN1-219, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 552 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-219ENST00000556951 CEACAM7Q14002 265 aa11.62□□□□□ -0.55
PSEN1-219ENST00000556951 CAPRIN1Q14444 709 aaKnown RBP11.62□□□□□ -0.55
PSEN1-219ENST00000556951 SLC10A1Q14973 349 aa11.62□□□□□ -0.55
PSEN1-219ENST00000556951 C6orf10Q5SRN2 563 aa11.62□□□□□ -0.55
PSEN1-219ENST00000556951 LRIF1Q5T3J3 769 aa11.62□□□□□ -0.55
PSEN1-219ENST00000556951 NDUFAF5Q5TEU4 345 aa11.62□□□□□ -0.55
PSEN1-219ENST00000556951 ANKRD26P1Q6NSI1 321 aa11.62□□□□□ -0.55
PSEN1-219ENST00000556951 NANOGP8Q6NSW7 305 aa11.62□□□□□ -0.55
PSEN1-219ENST00000556951 SLC15A3Q8IY34 581 aa11.62□□□□□ -0.55
PSEN1-219ENST00000556951 FAM109AQ8N4B1 249 aa11.62□□□□□ -0.55
PSEN1-219ENST00000556951 FAM47BQ8NA70 645 aa11.62□□□□□ -0.55
PSEN1-219ENST00000556951 OR8J3Q8NGG0 315 aa11.62□□□□□ -0.55
PSEN1-219ENST00000556951 LINC01560Q8TB33 94 aa11.62□□□□□ -0.55
PSEN1-219ENST00000556951 NCLNQ969V3 563 aa11.62□□□□□ -0.55
PSEN1-219ENST00000556951 CCDC115Q96NT0 180 aa11.62□□□□□ -0.55
PSEN1-219ENST00000556951 SERINC2Q96SA4 455 aa11.62□□□□□ -0.55
PSEN1-219ENST00000556951 SH3GL1Q99961 368 aa11.62□□□□□ -0.55
PSEN1-219ENST00000556951 PAIP1Q9H074 479 aaKnown RBP11.62□□□□□ -0.55
PSEN1-219ENST00000556951 DENND2DQ9H6A0 471 aaPredicted RBP11.62□□□□□ -0.55
PSEN1-219ENST00000556951 NANOGQ9H9S0 305 aa11.62□□□□□ -0.55
PSEN1-219ENST00000556951 CLK4Q9HAZ1 481 aaKnown RBP11.62□□□□□ -0.55
PSEN1-219ENST00000556951 MIEF1Q9NQG6 463 aa11.62□□□□□ -0.55
PSEN1-219ENST00000556951 CMTM6Q9NX76 183 aa11.62□□□□□ -0.55
PSEN1-219ENST00000556951 ALKBH4Q9NXW9 302 aa11.62□□□□□ -0.55
PSEN1-219ENST00000556951 TAS2R7Q9NYW3 318 aa11.62□□□□□ -0.55
PSEN1-219ENST00000556951 SLAMF8Q9P0V8 285 aa11.62□□□□□ -0.55
PSEN1-219ENST00000556951 ABCD2Q9UBJ2 740 aa11.62□□□□□ -0.55
PSEN1-219ENST00000556951 B4GALT7Q9UBV7 327 aa11.62□□□□□ -0.55
PSEN1-219ENST00000556951 CD300AQ9UGN4 299 aa11.62□□□□□ -0.55
PSEN1-219ENST00000556951 ERVK-11Q9UQG0 969 aa11.62□□□□□ -0.55
PSEN1-219ENST00000556951 PCDHA9Q9Y5H5 950 aa11.62□□□□□ -0.55
PSEN1-219ENST00000556951 ARHGAP21Q5T5U3 1957 aa11.61□□□□□ -0.55
PSEN1-219ENST00000556951 A0A0G2JK05 382 aa11.61□□□□□ -0.55
PSEN1-219ENST00000556951 A8MVJ9 347 aa11.61□□□□□ -0.55
PSEN1-219ENST00000556951 ACOT7O00154 380 aa11.61□□□□□ -0.55
PSEN1-219ENST00000556951 RNASET2O00584 256 aaKnown RBP11.61□□□□□ -0.55
PSEN1-219ENST00000556951 RFXANKO14593 260 aa11.61□□□□□ -0.55
PSEN1-219ENST00000556951 B3GALT2O43825 422 aa11.61□□□□□ -0.55
PSEN1-219ENST00000556951 MGRN1O60291 552 aa11.61□□□□□ -0.55
PSEN1-219ENST00000556951 DNAJA2O60884 412 aa11.61□□□□□ -0.55
PSEN1-219ENST00000556951 PDE5AO76074 875 aa11.61□□□□□ -0.55
PSEN1-219ENST00000556951 ZFAND5O76080 213 aa11.61□□□□□ -0.55
PSEN1-219ENST00000556951 DNASE1L1P49184 302 aa11.61□□□□□ -0.55
PSEN1-219ENST00000556951 MAN2A2P49641 1150 aa11.61□□□□□ -0.55
PSEN1-219ENST00000556951 ASCL1P50553 236 aa11.61□□□□□ -0.55
PSEN1-219ENST00000556951 EEFSECP57772 596 aaKnown RBP11.61□□□□□ -0.55
PSEN1-219ENST00000556951 PLIN5Q00G26 463 aa11.61□□□□□ -0.55
PSEN1-219ENST00000556951 RIPK1Q13546 671 aa11.61□□□□□ -0.55
PSEN1-219ENST00000556951 RUNDC3AQ59EK9 446 aa11.61□□□□□ -0.55
PSEN1-219ENST00000556951 WLSQ5T9L3 541 aa11.61□□□□□ -0.55
PSEN1-219ENST00000556951 C1orf146Q5VVC0 180 aa11.61□□□□□ -0.55
PSEN1-219ENST00000556951 GPALPP1Q8IXQ4 340 aa11.61□□□□□ -0.55
PSEN1-219ENST00000556951 CA13Q8N1Q1 262 aa11.61□□□□□ -0.55
PSEN1-219ENST00000556951 TNIP2Q8NFZ5 429 aa11.61□□□□□ -0.55
PSEN1-219ENST00000556951 VMP1Q96GC9 406 aa11.61□□□□□ -0.55
PSEN1-219ENST00000556951 ANKRD27Q96NW4 1050 aa11.61□□□□□ -0.55
PSEN1-219ENST00000556951 RASL10BQ96S79 203 aa11.61□□□□□ -0.55
PSEN1-219ENST00000556951 FAM173AQ9BQD7 235 aa11.61□□□□□ -0.55
PSEN1-219ENST00000556951 SLC39A3Q9BRY0 314 aa11.61□□□□□ -0.55
PSEN1-219ENST00000556951 INPP5KQ9BT40 448 aa11.61□□□□□ -0.55
PSEN1-219ENST00000556951 BEX4Q9NWD9 120 aaPredicted RBP11.61□□□□□ -0.55
PSEN1-219ENST00000556951 HPF1Q9NWY4 346 aa11.61□□□□□ -0.55
PSEN1-219ENST00000556951 TUBA8Q9NY65 449 aaPredicted RBP11.61□□□□□ -0.55
PSEN1-219ENST00000556951 EHD3Q9NZN3 535 aa11.61□□□□□ -0.55
PSEN1-219ENST00000556951 MYOTQ9UBF9 498 aa11.61□□□□□ -0.55
PSEN1-219ENST00000556951 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.61□□□□□ -0.55
PSEN1-219ENST00000556951 BCAP29Q9UHQ4 241 aa11.61□□□□□ -0.55
PSEN1-219ENST00000556951 PHF11Q9UIL8 331 aa11.61□□□□□ -0.55
PSEN1-219ENST00000556951 KIAA1549Q9HCM3 1950 aa11.6□□□□□ -0.55
PSEN1-219ENST00000556951 TRBV5-3A0A0A0MS03 114 aa11.6□□□□□ -0.55
PSEN1-219ENST00000556951 A0A1W2PR48 441 aa11.6□□□□□ -0.55
PSEN1-219ENST00000556951 HSPB2A8KAH6 182 aa11.6□□□□□ -0.55
PSEN1-219ENST00000556951 WWP2O00308 870 aa11.6□□□□□ -0.55
PSEN1-219ENST00000556951 ANP32DO95626 131 aa11.6□□□□□ -0.55
PSEN1-219ENST00000556951 CPSF4O95639 269 aaKnown RBP11.6□□□□□ -0.55
PSEN1-219ENST00000556951 HRGP04196 525 aa11.6□□□□□ -0.55
PSEN1-219ENST00000556951 RFPL3SP0C7P2 107 aa11.6□□□□□ -0.55
PSEN1-219ENST00000556951 ZCCHC18P0CG32 403 aa11.6□□□□□ -0.55
PSEN1-219ENST00000556951 RNH1P13489 461 aaKnown RBP11.6□□□□□ -0.55
PSEN1-219ENST00000556951 HSD17B1P14061 328 aa11.6□□□□□ -0.55
PSEN1-219ENST00000556951 GABRA1P14867 456 aa11.6□□□□□ -0.55
PSEN1-219ENST00000556951 CERS1P27544 350 aa11.6□□□□□ -0.55
PSEN1-219ENST00000556951 ALDH9A1P49189 494 aa11.6□□□□□ -0.55
PSEN1-219ENST00000556951 TRAP1Q12931 704 aaKnown RBP11.6□□□□□ -0.55
PSEN1-219ENST00000556951 RUNX2Q13950 521 aa11.6□□□□□ -0.55
PSEN1-219ENST00000556951 KPNB1Q14974 876 aaKnown RBP11.6□□□□□ -0.55
PSEN1-219ENST00000556951 HSPB2Q16082 182 aa11.6□□□□□ -0.55
PSEN1-219ENST00000556951 ZNF385BQ569K4 471 aa11.6□□□□□ -0.55
PSEN1-219ENST00000556951 NIPAL1Q6NVV3 410 aa11.6□□□□□ -0.55
PSEN1-219ENST00000556951 ANKRD46Q86W74 232 aa11.6□□□□□ -0.55
PSEN1-219ENST00000556951 C10orf67Q8IYJ2 551 aa11.6□□□□□ -0.55
PSEN1-219ENST00000556951 TMEM52Q8NDY8 209 aa11.6□□□□□ -0.55
PSEN1-219ENST00000556951 SARAFQ96BY9 339 aa11.6□□□□□ -0.55
PSEN1-219ENST00000556951 PANX1Q96RD7 426 aa11.6□□□□□ -0.55
PSEN1-219ENST00000556951 NPLQ9BXD5 320 aaPredicted RBP11.6□□□□□ -0.55
PSEN1-219ENST00000556951 LYRM4Q9HD34 91 aa11.6□□□□□ -0.55
PSEN1-219ENST00000556951 PNO1Q9NRX1 252 aaKnown RBP11.6□□□□□ -0.55
PSEN1-219ENST00000556951 MS4A12Q9NXJ0 267 aa11.6□□□□□ -0.55
PSEN1-219ENST00000556951 VAPAQ9P0L0 249 aa11.6□□□□□ -0.55
PSEN1-219ENST00000556951 PCDHGB4Q9UN71 923 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms