RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 H0Y3Z8 333 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 LINC01387J3KSC0 135 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 CTIFO43310 598 aaKnown RBP6.66□□□□□ -1.34
SCFD1-222ENST00000556768 AKAP10O43572 662 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 TSPAN2O60636 221 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 LYPLA1O75608 230 aaPredicted RBP6.66□□□□□ -1.34
SCFD1-222ENST00000556768 SNUPNO95149 360 aaKnown RBP6.66□□□□□ -1.34
SCFD1-222ENST00000556768 IFI6P09912 130 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 PRPS2P11908 318 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 CPN1P15169 458 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 CHMP24386 653 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 DPP4P27487 766 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 SRD5A2P31213 254 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 UQCRC1P31930 480 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 GABRA3P34903 492 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 EVI2BP34910 448 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 HPCAL1P37235 193 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 DSCR4P56555 118 aaPredicted RBP6.66□□□□□ -1.34
SCFD1-222ENST00000556768 EEFSECP57772 596 aaKnown RBP6.66□□□□□ -1.34
SCFD1-222ENST00000556768 PSG6Q00889 435 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 SRYQ05066 204 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 MAD2L1Q13257 205 aaPredicted RBP6.66□□□□□ -1.34
SCFD1-222ENST00000556768 GAB1Q13480 694 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 KIAA0040Q15053 153 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 KRT71Q3SY84 523 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 ACSF3Q4G176 576 aaPredicted RBP6.66□□□□□ -1.34
SCFD1-222ENST00000556768 NSUN5P2Q63ZY6 315 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 OR5M10Q6IEU7 315 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 ARSKQ6UWY0 536 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 Q6ZSR9 355 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 LURAP1LQ8IV03 231 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 DMRTC2Q8IXT2 367 aaPredicted RBP6.66□□□□□ -1.34
SCFD1-222ENST00000556768 CDRT4Q8N9R6 151 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 WDSUB1Q8N9V3 476 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 FNDC5Q8NAU1 212 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 GOT1L1Q8NHS2 421 aaPredicted RBP6.66□□□□□ -1.34
SCFD1-222ENST00000556768 ZPLD1Q8TCW7 415 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 AGR3Q8TD06 166 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 AENQ8WTP8 325 aaKnown RBP6.66□□□□□ -1.34
SCFD1-222ENST00000556768 CHMP6Q96FZ7 201 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 ZNF764Q96H86 408 aaPredicted RBP6.66□□□□□ -1.34
SCFD1-222ENST00000556768 EGLN2Q96KS0 407 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 SFXN2Q96NB2 322 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 TSSK3Q96PN8 268 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 UGT2B28Q9BY64 529 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 WNT10AQ9GZT5 417 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 EQTNQ9NQ60 294 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 ACSS1Q9NUB1 689 aaPredicted RBP6.66□□□□□ -1.34
SCFD1-222ENST00000556768 ABCG2Q9UNQ0 655 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 EIF3LQ9Y262 564 aaKnown RBP6.66□□□□□ -1.34
SCFD1-222ENST00000556768 MRPS18CQ9Y3D5 142 aaKnown RBP6.66□□□□□ -1.34
SCFD1-222ENST00000556768 CACNA1DQ01668 2161 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 PKDREJQ9NTG1 2253 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 CROCCQ5TZA2 2017 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 SYT5O00445 386 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 PIP5K1BO14986 540 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 LSM1O15116 133 aaKnown RBP6.66□□□□□ -1.34
SCFD1-222ENST00000556768 PEX11AO75192 247 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 DNAJC8O75937 253 aaPredicted RBP6.66□□□□□ -1.34
SCFD1-222ENST00000556768 SCGB1D2O95969 90 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 POU3F2P20265 443 aaPredicted RBP6.66□□□□□ -1.34
SCFD1-222ENST00000556768 GRK2P25098 689 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 TACR1P25103 407 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 KIR2DL3P43628 341 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 SUMO1P63165 101 aaKnown RBP6.66□□□□□ -1.34
SCFD1-222ENST00000556768 TFF3Q07654 80 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 C17orf67Q0P5P2 114 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 GANABQ14697 944 aaKnown RBP6.66□□□□□ -1.34
SCFD1-222ENST00000556768 LSM12Q3MHD2 195 aaKnown RBP6.66□□□□□ -1.34
SCFD1-222ENST00000556768 CPTPQ5TA50 214 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 KANK2Q63ZY3 851 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 ZCCHC12Q6PEW1 402 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 BHLHB9Q6PI77 547 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 TMEM200AQ86VY9 491 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 OR4N2Q8NGD1 307 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 SLC9A6Q92581 669 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 WDYHV1Q96HA8 205 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 ZFP3Q96NJ6 502 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 G6PC3Q9BUM1 346 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 MECRQ9BV79 373 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 TMEM109Q9BVC6 243 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 FAM120CQ9NX05 1096 aaKnown RBP6.66□□□□□ -1.34
SCFD1-222ENST00000556768 SLC17A7Q9P2U7 560 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 BAIAP2L1Q9UHR4 511 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 CCL27Q9Y4X3 112 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 SNX8Q9Y5X2 465 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 CELSR1Q9NYQ6 3014 aa6.66□□□□□ -1.34
SCFD1-222ENST00000556768 EEF1E1-BLOC1S5C9J1V9 151 aa6.65□□□□□ -1.34
SCFD1-222ENST00000556768 RGS13O14921 159 aa6.65□□□□□ -1.34
SCFD1-222ENST00000556768 TM9SF1O15321 606 aa6.65□□□□□ -1.34
SCFD1-222ENST00000556768 EEF1E1O43324 174 aaKnown RBP6.65□□□□□ -1.34
SCFD1-222ENST00000556768 EMC8O43402 210 aa6.65□□□□□ -1.34
SCFD1-222ENST00000556768 SCO2O43819 266 aa6.65□□□□□ -1.34
SCFD1-222ENST00000556768 ZNF500O60304 480 aaPredicted RBP6.65□□□□□ -1.34
SCFD1-222ENST00000556768 TBX19O60806 448 aa6.65□□□□□ -1.34
SCFD1-222ENST00000556768 NME6O75414 186 aaPredicted RBP6.65□□□□□ -1.34
SCFD1-222ENST00000556768 HSPA4LO95757 839 aa6.65□□□□□ -1.34
SCFD1-222ENST00000556768 IL33O95760 270 aa6.65□□□□□ -1.34
SCFD1-222ENST00000556768 CHRNGP07510 517 aa6.65□□□□□ -1.34
SCFD1-222ENST00000556768 BPGMP07738 259 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms