RNA–Protein interactions for RNA: ENST00000556648.1

TMEM260-211, Transcript of transmembrane protein 260, humanhuman

TSL 2

Gene TMEM260, Length 2,013 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-211ENST00000556648 CDRT4Q8N9R6 151 aa9.41□□□□□ -0.9
TMEM260-211ENST00000556648 OR4N2Q8NGD1 307 aa9.41□□□□□ -0.9
TMEM260-211ENST00000556648 MCFD2Q8NI22 146 aa9.41□□□□□ -0.9
TMEM260-211ENST00000556648 TMEM163Q8TC26 289 aa9.41□□□□□ -0.9
TMEM260-211ENST00000556648 CTHRC1Q96CG8 243 aa9.41□□□□□ -0.9
TMEM260-211ENST00000556648 MIR1-1HGQ9H1L0 117 aa9.41□□□□□ -0.9
TMEM260-211ENST00000556648 TRIM45Q9H8W5 580 aaPredicted RBP9.41□□□□□ -0.9
TMEM260-211ENST00000556648 FBXO8Q9NRD0 319 aa9.41□□□□□ -0.9
TMEM260-211ENST00000556648 GALNT8Q9NY28 637 aa9.41□□□□□ -0.9
TMEM260-211ENST00000556648 DTX4Q9Y2E6 619 aa9.41□□□□□ -0.9
TMEM260-211ENST00000556648 LOC105378220A0A1B0GUY1 285 aaPredicted RBP9.4□□□□□ -0.9
TMEM260-211ENST00000556648 LRRTM2O43300 516 aa9.4□□□□□ -0.9
TMEM260-211ENST00000556648 OR10H2O60403 315 aa9.4□□□□□ -0.9
TMEM260-211ENST00000556648 SULT1C4O75897 302 aa9.4□□□□□ -0.9
TMEM260-211ENST00000556648 SLC2A10O95528 541 aa9.4□□□□□ -0.9
TMEM260-211ENST00000556648 PROS1P07225 676 aa9.4□□□□□ -0.9
TMEM260-211ENST00000556648 THBS1P07996 1170 aa9.4□□□□□ -0.9
TMEM260-211ENST00000556648 NME1P15531 152 aaKnown RBP9.4□□□□□ -0.9
TMEM260-211ENST00000556648 POU3F3P20264 500 aaPredicted RBP9.4□□□□□ -0.9
TMEM260-211ENST00000556648 S1PR1P21453 382 aa9.4□□□□□ -0.9
TMEM260-211ENST00000556648 CAPZBP47756 277 aa9.4□□□□□ -0.9
TMEM260-211ENST00000556648 BLKP51451 505 aa9.4□□□□□ -0.9
TMEM260-211ENST00000556648 BTG2P78543 158 aa9.4□□□□□ -0.9
TMEM260-211ENST00000556648 DEFB133Q30KQ1 61 aa9.4□□□□□ -0.9
TMEM260-211ENST00000556648 PERM1Q5SV97 790 aa9.4□□□□□ -0.9
TMEM260-211ENST00000556648 NKAIN2Q5VXU1 208 aa9.4□□□□□ -0.9
TMEM260-211ENST00000556648 SLC27A4Q6P1M0 643 aa9.4□□□□□ -0.9
TMEM260-211ENST00000556648 DCDC5Q6ZRR9 648 aa9.4□□□□□ -0.9
TMEM260-211ENST00000556648 MBOAT2Q6ZWT7 520 aa9.4□□□□□ -0.9
TMEM260-211ENST00000556648 USP43Q70EL4 1123 aa9.4□□□□□ -0.9
TMEM260-211ENST00000556648 VWA5B2Q8N398 1253 aa9.4□□□□□ -0.9
TMEM260-211ENST00000556648 BBS1Q8NFJ9 593 aa9.4□□□□□ -0.9
TMEM260-211ENST00000556648 SNRNP27Q8WVK2 155 aaKnown RBP9.4□□□□□ -0.9
TMEM260-211ENST00000556648 WDR12Q9GZL7 423 aaKnown RBP9.4□□□□□ -0.9
TMEM260-211ENST00000556648 DUSP22Q9NRW4 184 aa9.4□□□□□ -0.9
TMEM260-211ENST00000556648 TESQ9UGI8 421 aaKnown RBP9.4□□□□□ -0.9
TMEM260-211ENST00000556648 ZNF232Q9UNY5 417 aa9.4□□□□□ -0.9
TMEM260-211ENST00000556648 ERGIC3Q9Y282 383 aa9.4□□□□□ -0.9
TMEM260-211ENST00000556648 TMEM184BQ9Y519 407 aaPredicted RBP9.4□□□□□ -0.9
TMEM260-211ENST00000556648 METTL12A8MUP2 240 aa9.39□□□□□ -0.91
TMEM260-211ENST00000556648 CCRL2O00421 344 aa9.39□□□□□ -0.91
TMEM260-211ENST00000556648 KPNA4O00629 521 aaPredicted RBP9.39□□□□□ -0.91
TMEM260-211ENST00000556648 HRO43593 1189 aa9.39□□□□□ -0.91
TMEM260-211ENST00000556648 NID1P14543 1247 aa9.39□□□□□ -0.91
TMEM260-211ENST00000556648 MAKP20794 623 aa9.39□□□□□ -0.91
TMEM260-211ENST00000556648 FPR3P25089 353 aa9.39□□□□□ -0.91
TMEM260-211ENST00000556648 CD27P26842 260 aa9.39□□□□□ -0.91
TMEM260-211ENST00000556648 CD38P28907 300 aa9.39□□□□□ -0.91
TMEM260-211ENST00000556648 IFNGR2P38484 337 aa9.39□□□□□ -0.91
TMEM260-211ENST00000556648 GABRA4P48169 554 aa9.39□□□□□ -0.91
TMEM260-211ENST00000556648 PPM1FP49593 454 aaPredicted RBP9.39□□□□□ -0.91
TMEM260-211ENST00000556648 EMDP50402 254 aa9.39□□□□□ -0.91
TMEM260-211ENST00000556648 POU6F2P78424 691 aaPredicted RBP9.39□□□□□ -0.91
TMEM260-211ENST00000556648 NCF4Q15080 339 aa9.39□□□□□ -0.91
TMEM260-211ENST00000556648 OR1Q1Q15612 314 aa9.39□□□□□ -0.91
TMEM260-211ENST00000556648 NNATQ16517 81 aa9.39□□□□□ -0.91
TMEM260-211ENST00000556648 EIPR1Q53HC9 387 aa9.39□□□□□ -0.91
TMEM260-211ENST00000556648 SLC36A4Q6YBV0 504 aa9.39□□□□□ -0.91
TMEM260-211ENST00000556648 ZNF620Q6ZNG0 422 aa9.39□□□□□ -0.91
TMEM260-211ENST00000556648 NANOGP1Q8N7R0 232 aa9.39□□□□□ -0.91
TMEM260-211ENST00000556648 NR4A3Q92570 626 aa9.39□□□□□ -0.91
TMEM260-211ENST00000556648 RNFT2Q96EX2 444 aa9.39□□□□□ -0.91
TMEM260-211ENST00000556648 SAMD8Q96LT4 415 aa9.39□□□□□ -0.91
TMEM260-211ENST00000556648 TGM7Q96PF1 710 aa9.39□□□□□ -0.91
TMEM260-211ENST00000556648 STACQ99469 402 aa9.39□□□□□ -0.91
TMEM260-211ENST00000556648 CDADC1Q9BWV3 514 aa9.39□□□□□ -0.91
TMEM260-211ENST00000556648 DPH1Q9BZG8 443 aa9.39□□□□□ -0.91
TMEM260-211ENST00000556648 ANKRD19PQ9H560 264 aa9.39□□□□□ -0.91
TMEM260-211ENST00000556648 CACYBPQ9HB71 228 aaKnown RBP9.39□□□□□ -0.91
TMEM260-211ENST00000556648 FOLH1BQ9HBA9 442 aa9.39□□□□□ -0.91
TMEM260-211ENST00000556648 HMG20AQ9NP66 347 aa9.39□□□□□ -0.91
TMEM260-211ENST00000556648 PALMDQ9NP74 551 aa9.39□□□□□ -0.91
TMEM260-211ENST00000556648 ATP13A2Q9NQ11 1180 aa9.39□□□□□ -0.91
TMEM260-211ENST00000556648 C20orf141Q9NUB4 165 aa9.39□□□□□ -0.91
TMEM260-211ENST00000556648 FAIMQ9NVQ4 179 aa9.39□□□□□ -0.91
TMEM260-211ENST00000556648 UCKL1Q9NWZ5 548 aa9.39□□□□□ -0.91
TMEM260-211ENST00000556648 KLHL3Q9UH77 587 aa9.39□□□□□ -0.91
TMEM260-211ENST00000556648 ZNF223Q9UK11 482 aaPredicted RBP9.39□□□□□ -0.91
TMEM260-211ENST00000556648 SATB2Q9UPW6 733 aa9.39□□□□□ -0.91
TMEM260-211ENST00000556648 CLDN16Q9Y5I7 305 aa9.39□□□□□ -0.91
TMEM260-211ENST00000556648 TRIOO75962 3097 aa9.39□□□□□ -0.91
TMEM260-211ENST00000556648 GON4LQ3T8J9 2241 aa9.39□□□□□ -0.91
TMEM260-211ENST00000556648 CDHR4A6H8M9 788 aa9.39□□□□□ -0.91
TMEM260-211ENST00000556648 ANKRD33BA6NCL7 494 aa9.39□□□□□ -0.91
TMEM260-211ENST00000556648 PRKNO60260 465 aaPredicted RBP9.39□□□□□ -0.91
TMEM260-211ENST00000556648 BRINP1O60477 761 aa9.39□□□□□ -0.91
TMEM260-211ENST00000556648 ADAM11O75078 769 aa9.39□□□□□ -0.91
TMEM260-211ENST00000556648 ZNF217O75362 1048 aa9.39□□□□□ -0.91
TMEM260-211ENST00000556648 KCNK2O95069 426 aa9.39□□□□□ -0.91
TMEM260-211ENST00000556648 RAB36O95755 333 aa9.39□□□□□ -0.91
TMEM260-211ENST00000556648 SCG5P05408 212 aa9.39□□□□□ -0.91
TMEM260-211ENST00000556648 DBIP07108 87 aaKnown RBP9.39□□□□□ -0.91
TMEM260-211ENST00000556648 ZGLP1P0C6A0 271 aa9.39□□□□□ -0.91
TMEM260-211ENST00000556648 SLC35E2P0CK97 266 aa9.39□□□□□ -0.91
TMEM260-211ENST00000556648 SPTBP11277 2137 aa9.39□□□□□ -0.91
TMEM260-211ENST00000556648 MAOAP21397 527 aa9.39□□□□□ -0.91
TMEM260-211ENST00000556648 FXYD6P3P58550 94 aa9.39□□□□□ -0.91
TMEM260-211ENST00000556648 RHAGQ02094 409 aa9.39□□□□□ -0.91
TMEM260-211ENST00000556648 SLC13A2Q13183 592 aa9.39□□□□□ -0.91
TMEM260-211ENST00000556648 FAM53BQ14153 422 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms