RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 PLD6Q8N2A8 252 aaKnown RBP10.63□□□□□ -0.71
ACTN1-221ENST00000556571 STEAP2Q8NFT2 490 aa10.63□□□□□ -0.71
ACTN1-221ENST00000556571 LILRB1Q8NHL6 650 aaPredicted RBP10.63□□□□□ -0.71
ACTN1-221ENST00000556571 RAB3IL1Q8TBN0 382 aa10.63□□□□□ -0.71
ACTN1-221ENST00000556571 SMAP2Q8WU79 429 aaPredicted RBP10.63□□□□□ -0.71
ACTN1-221ENST00000556571 FBXW5Q969U6 566 aa10.63□□□□□ -0.71
ACTN1-221ENST00000556571 ZBED6CLQ96FA7 236 aaPredicted RBP10.63□□□□□ -0.71
ACTN1-221ENST00000556571 HDHD5Q9BXW7 423 aa10.63□□□□□ -0.71
ACTN1-221ENST00000556571 SHCBP1LQ9BZQ2 653 aa10.63□□□□□ -0.71
ACTN1-221ENST00000556571 RTN4RQ9BZR6 473 aa10.63□□□□□ -0.71
ACTN1-221ENST00000556571 SLCO5A1Q9H2Y9 848 aa10.63□□□□□ -0.71
ACTN1-221ENST00000556571 NGBQ9NPG2 151 aa10.63□□□□□ -0.71
ACTN1-221ENST00000556571 MRTO4Q9UKD2 239 aaKnown RBP10.63□□□□□ -0.71
ACTN1-221ENST00000556571 RNF115Q9Y4L5 304 aa10.63□□□□□ -0.71
ACTN1-221ENST00000556571 SNX8Q9Y5X2 465 aa10.63□□□□□ -0.71
ACTN1-221ENST00000556571 A0A087WV62 115 aa10.62□□□□□ -0.71
ACTN1-221ENST00000556571 IGLV3-32A0A0A0MS00 114 aa10.62□□□□□ -0.71
ACTN1-221ENST00000556571 GNG14A0A1W2PPG7 69 aa10.62□□□□□ -0.71
ACTN1-221ENST00000556571 A8MV72 311 aaPredicted RBP10.62□□□□□ -0.71
ACTN1-221ENST00000556571 PPP6CO00743 305 aa10.62□□□□□ -0.71
ACTN1-221ENST00000556571 SYNGR4O95473 234 aa10.62□□□□□ -0.71
ACTN1-221ENST00000556571 F12P00748 615 aaPredicted RBP10.62□□□□□ -0.71
ACTN1-221ENST00000556571 FESP07332 822 aa10.62□□□□□ -0.71
ACTN1-221ENST00000556571 CD3EP07766 207 aa10.62□□□□□ -0.71
ACTN1-221ENST00000556571 RPS17P08708 135 aaKnown RBP10.62□□□□□ -0.71
ACTN1-221ENST00000556571 ECHS1P30084 290 aa10.62□□□□□ -0.71
ACTN1-221ENST00000556571 ACVR1BP36896 505 aa10.62□□□□□ -0.71
ACTN1-221ENST00000556571 SERPINB9P50453 376 aa10.62□□□□□ -0.71
ACTN1-221ENST00000556571 PSMD4P55036 377 aaKnown RBP10.62□□□□□ -0.71
ACTN1-221ENST00000556571 GTF2IRD2BQ6EKJ0 949 aa10.62□□□□□ -0.71
ACTN1-221ENST00000556571 ALKBH2Q6NS38 261 aa10.62□□□□□ -0.71
ACTN1-221ENST00000556571 LETMD1Q6P1Q0 360 aa10.62□□□□□ -0.71
ACTN1-221ENST00000556571 DNAJC14Q6Y2X3 702 aaPredicted RBP10.62□□□□□ -0.71
ACTN1-221ENST00000556571 TRMT10CQ7L0Y3 403 aaKnown RBP10.62□□□□□ -0.71
ACTN1-221ENST00000556571 GTF2IRD2Q86UP8 949 aa10.62□□□□□ -0.71
ACTN1-221ENST00000556571 WDR75Q8IWA0 830 aaKnown RBP10.62□□□□□ -0.71
ACTN1-221ENST00000556571 OR10D3Q8NH80 312 aa10.62□□□□□ -0.71
ACTN1-221ENST00000556571 BBS4Q96RK4 519 aa10.62□□□□□ -0.71
ACTN1-221ENST00000556571 HBEGFQ99075 208 aa10.62□□□□□ -0.71
ACTN1-221ENST00000556571 TBL1XR1Q9BZK7 514 aa10.62□□□□□ -0.71
ACTN1-221ENST00000556571 ESRP2Q9H6T0 727 aaKnown RBP10.62□□□□□ -0.71
ACTN1-221ENST00000556571 L2HGDHQ9H9P8 463 aa10.62□□□□□ -0.71
ACTN1-221ENST00000556571 HHATLQ9HCP6 504 aa10.62□□□□□ -0.71
ACTN1-221ENST00000556571 Q9N2J8 555 aa10.62□□□□□ -0.71
ACTN1-221ENST00000556571 FLRT3Q9NZU0 649 aa10.62□□□□□ -0.71
ACTN1-221ENST00000556571 LIPT1Q9Y234 373 aa10.62□□□□□ -0.71
ACTN1-221ENST00000556571 CADP27708 2225 aa10.62□□□□□ -0.71
ACTN1-221ENST00000556571 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.62□□□□□ -0.711e-6■■■■□ 19.9
ACTN1-221ENST00000556571 ALPK2Q86TB3 2170 aa10.61□□□□□ -0.71
ACTN1-221ENST00000556571 EXOC1LA0A1B0GW35 172 aa10.61□□□□□ -0.71
ACTN1-221ENST00000556571 A0A1W2PP18 115 aa10.61□□□□□ -0.71
ACTN1-221ENST00000556571 SHISA8B8ZZ34 492 aa10.61□□□□□ -0.71
ACTN1-221ENST00000556571 POC1B-GALNT4F8VUJ3 575 aa10.61□□□□□ -0.71
ACTN1-221ENST00000556571 MANBAO00462 879 aa10.61□□□□□ -0.71
ACTN1-221ENST00000556571 ADAMDEC1O15204 470 aa10.61□□□□□ -0.71
ACTN1-221ENST00000556571 CLOCKO15516 846 aa10.61□□□□□ -0.71
ACTN1-221ENST00000556571 PHF1O43189 567 aaPredicted RBP10.61□□□□□ -0.71
ACTN1-221ENST00000556571 PCDH7O60245 1069 aa10.61□□□□□ -0.71
ACTN1-221ENST00000556571 SLITRK5O94991 958 aa10.61□□□□□ -0.71
ACTN1-221ENST00000556571 IL33O95760 270 aa10.61□□□□□ -0.71
ACTN1-221ENST00000556571 KRT6AP02538 564 aa10.61□□□□□ -0.71
ACTN1-221ENST00000556571 KRT6BP04259 564 aa10.61□□□□□ -0.71
ACTN1-221ENST00000556571 TUBBP07437 444 aa10.61□□□□□ -0.71
ACTN1-221ENST00000556571 THBS1P07996 1170 aa10.61□□□□□ -0.71
ACTN1-221ENST00000556571 ZNF17P17021 662 aa10.61□□□□□ -0.71
ACTN1-221ENST00000556571 CDKN1AP38936 164 aa10.61□□□□□ -0.71
ACTN1-221ENST00000556571 KRT6CP48668 564 aa10.61□□□□□ -0.71
ACTN1-221ENST00000556571 CDH13P55290 713 aa10.61□□□□□ -0.71
ACTN1-221ENST00000556571 PRR5P85299 388 aa10.61□□□□□ -0.71
ACTN1-221ENST00000556571 ZNF844Q08AG5 666 aa10.61□□□□□ -0.71
ACTN1-221ENST00000556571 CSTF3Q12996 717 aaKnown RBP10.61□□□□□ -0.71
ACTN1-221ENST00000556571 TSNAXIP1Q2TAA8 658 aa10.61□□□□□ -0.71
ACTN1-221ENST00000556571 NCMAPQ5T1S8 102 aa10.61□□□□□ -0.71
ACTN1-221ENST00000556571 DNM1P46Q6ZS02 220 aa10.61□□□□□ -0.71
ACTN1-221ENST00000556571 RPS27LQ71UM5 84 aaKnown RBP10.61□□□□□ -0.71
ACTN1-221ENST00000556571 ZNF483Q8TF39 744 aaPredicted RBP10.61□□□□□ -0.71
ACTN1-221ENST00000556571 C16orf78Q8WTQ4 265 aa10.61□□□□□ -0.71
ACTN1-221ENST00000556571 HSD17B8Q92506 261 aa10.61□□□□□ -0.71
ACTN1-221ENST00000556571 S100PBPQ96BU1 408 aa10.61□□□□□ -0.71
ACTN1-221ENST00000556571 ADGRG7Q96K78 797 aa10.61□□□□□ -0.71
ACTN1-221ENST00000556571 PAFAH2Q99487 392 aa10.61□□□□□ -0.71
ACTN1-221ENST00000556571 LRTM1Q9HBL6 345 aa10.61□□□□□ -0.71
ACTN1-221ENST00000556571 BARX1Q9HBU1 254 aaPredicted RBP10.61□□□□□ -0.71
ACTN1-221ENST00000556571 XPR1Q9UBH6 696 aa10.61□□□□□ -0.71
ACTN1-221ENST00000556571 ZNF225Q9UK10 706 aa10.61□□□□□ -0.71
ACTN1-221ENST00000556571 C19orf53Q9UNZ5 99 aaPredicted RBP10.61□□□□□ -0.71
ACTN1-221ENST00000556571 MAGED1Q9Y5V3 778 aaPredicted RBP10.61□□□□□ -0.71
ACTN1-221ENST00000556571 CUBNO60494 3623 aa10.61□□□□□ -0.71
ACTN1-221ENST00000556571 A0A087WZY1 265 aa10.6□□□□□ -0.71
ACTN1-221ENST00000556571 MYO1GB0I1T2 1018 aa10.6□□□□□ -0.71
ACTN1-221ENST00000556571 CXCL13O43927 109 aa10.6□□□□□ -0.71
ACTN1-221ENST00000556571 ADAM11O75078 769 aa10.6□□□□□ -0.71
ACTN1-221ENST00000556571 ULK1O75385 1050 aa10.6□□□□□ -0.71
ACTN1-221ENST00000556571 OR4F21O95013 312 aa10.6□□□□□ -0.71
ACTN1-221ENST00000556571 UTS2O95399 124 aa10.6□□□□□ -0.71
ACTN1-221ENST00000556571 ANGPTL1O95841 491 aa10.6□□□□□ -0.71
ACTN1-221ENST00000556571 IGHV4-39P01824 125 aa10.6□□□□□ -0.71
ACTN1-221ENST00000556571 PABPC4LP0CB38 370 aaKnown RBP10.6□□□□□ -0.71
ACTN1-221ENST00000556571 FAM157CP0CG43 387 aa10.6□□□□□ -0.71
ACTN1-221ENST00000556571 COL6A2P12110 1019 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms