RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 AURKCQ9UQB9 309 aa2.13□□□□□ -2.07
SCFD1-218ENST00000556256 RNF6Q9Y252 685 aa2.13□□□□□ -2.07
SCFD1-218ENST00000556256 GRIN2DO15399 1336 aa2.13□□□□□ -2.07
SCFD1-218ENST00000556256 ATP8B3O60423 1300 aa2.13□□□□□ -2.07
SCFD1-218ENST00000556256 A0A087WZY1 265 aa2.12□□□□□ -2.07
SCFD1-218ENST00000556256 ESYT2A0FGR8 921 aa2.12□□□□□ -2.07
SCFD1-218ENST00000556256 FRG2CA6NGY1 282 aa2.12□□□□□ -2.07
SCFD1-218ENST00000556256 G3V3Y1 287 aa2.12□□□□□ -2.07
SCFD1-218ENST00000556256 K7EPI3 171 aa2.12□□□□□ -2.07
SCFD1-218ENST00000556256 SDHDO14521 159 aa2.12□□□□□ -2.07
SCFD1-218ENST00000556256 PPIHO43447 177 aaKnown RBP2.12□□□□□ -2.07
SCFD1-218ENST00000556256 LATO43561 262 aa2.12□□□□□ -2.07
SCFD1-218ENST00000556256 OR4F21O95013 312 aa2.12□□□□□ -2.07
SCFD1-218ENST00000556256 DUSP14O95147 198 aaKnown RBP2.12□□□□□ -2.07
SCFD1-218ENST00000556256 DIRAS3O95661 229 aa2.12□□□□□ -2.07
SCFD1-218ENST00000556256 AK1P00568 194 aa2.12□□□□□ -2.07
SCFD1-218ENST00000556256 CA3P07451 260 aa2.12□□□□□ -2.07
SCFD1-218ENST00000556256 ALPIP09923 528 aa2.12□□□□□ -2.07
SCFD1-218ENST00000556256 THRBP10828 461 aa2.12□□□□□ -2.07
SCFD1-218ENST00000556256 UMPSP11172 480 aa2.12□□□□□ -2.07
SCFD1-218ENST00000556256 SDC1P18827 310 aa2.12□□□□□ -2.07
SCFD1-218ENST00000556256 AXLP30530 894 aa2.12□□□□□ -2.07
SCFD1-218ENST00000556256 RPL4P36578 427 aaKnown RBP2.12□□□□□ -2.07
SCFD1-218ENST00000556256 MDH1P40925 334 aaKnown RBP2.12□□□□□ -2.07
SCFD1-218ENST00000556256 PTGFRP43088 359 aa2.12□□□□□ -2.07
SCFD1-218ENST00000556256 EMDP50402 254 aa2.12□□□□□ -2.07
SCFD1-218ENST00000556256 UCNP55089 124 aa2.12□□□□□ -2.07
SCFD1-218ENST00000556256 MTTPP55157 894 aa2.12□□□□□ -2.07
SCFD1-218ENST00000556256 PRKCEQ02156 737 aa2.12□□□□□ -2.07
SCFD1-218ENST00000556256 IL18R1Q13478 541 aa2.12□□□□□ -2.07
SCFD1-218ENST00000556256 SLC10A1Q14973 349 aa2.12□□□□□ -2.07
SCFD1-218ENST00000556256 UBE2V2Q15819 145 aa2.12□□□□□ -2.07
SCFD1-218ENST00000556256 FAM120AOSQ5T036 256 aa2.12□□□□□ -2.07
SCFD1-218ENST00000556256 ZNF57Q68EA5 555 aaPredicted RBP2.12□□□□□ -2.07
SCFD1-218ENST00000556256 ZNF530Q6P9A1 599 aaPredicted RBP2.12□□□□□ -2.07
SCFD1-218ENST00000556256 LRRC8BQ6P9F7 803 aa2.12□□□□□ -2.07
SCFD1-218ENST00000556256 CBLN3Q6UW01 205 aa2.12□□□□□ -2.07
SCFD1-218ENST00000556256 ERASQ7Z444 233 aa2.12□□□□□ -2.07
SCFD1-218ENST00000556256 ERICH1Q86X53 443 aa2.12□□□□□ -2.07
SCFD1-218ENST00000556256 C9orf40Q8IXQ3 194 aa2.12□□□□□ -2.07
SCFD1-218ENST00000556256 ZBTB44Q8NCP5 570 aa2.12□□□□□ -2.07
SCFD1-218ENST00000556256 ADAMTS16Q8TE57 1224 aa2.12□□□□□ -2.07
SCFD1-218ENST00000556256 GIPC3Q8TF64 312 aa2.12□□□□□ -2.07
SCFD1-218ENST00000556256 TFB1MQ8WVM0 346 aaKnown RBP2.12□□□□□ -2.07
SCFD1-218ENST00000556256 TAF4BQ92750 862 aa2.12□□□□□ -2.07
SCFD1-218ENST00000556256 UPRTQ96BW1 309 aa2.12□□□□□ -2.07
SCFD1-218ENST00000556256 PPP1R16AQ96I34 528 aa2.12□□□□□ -2.07
SCFD1-218ENST00000556256 CASD1Q96PB1 797 aa2.12□□□□□ -2.07
SCFD1-218ENST00000556256 SIGLEC12Q96PQ1 595 aa2.12□□□□□ -2.07
SCFD1-218ENST00000556256 GPA33Q99795 319 aa2.12□□□□□ -2.07
SCFD1-218ENST00000556256 FEM1AQ9BSK4 669 aa2.12□□□□□ -2.07
SCFD1-218ENST00000556256 TMEM121Q9BTD3 319 aa2.12□□□□□ -2.07
SCFD1-218ENST00000556256 TBCDQ9BTW9 1192 aa2.12□□□□□ -2.07
SCFD1-218ENST00000556256 PAXXQ9BUH6 204 aa2.12□□□□□ -2.07
SCFD1-218ENST00000556256 COMMD4Q9H0A8 199 aa2.12□□□□□ -2.07
SCFD1-218ENST00000556256 SLC25A51Q9H1U9 297 aa2.12□□□□□ -2.07
SCFD1-218ENST00000556256 IKZF5Q9H5V7 419 aa2.12□□□□□ -2.07
SCFD1-218ENST00000556256 CALHM2Q9HA72 323 aa2.12□□□□□ -2.07
SCFD1-218ENST00000556256 RBM28Q9NW13 759 aaKnown RBP2.12□□□□□ -2.07
SCFD1-218ENST00000556256 C1orf123Q9NWV4 160 aa2.12□□□□□ -2.07
SCFD1-218ENST00000556256 ELOVL2Q9NXB9 296 aa2.12□□□□□ -2.07
SCFD1-218ENST00000556256 EHFQ9NZC4 300 aa2.12□□□□□ -2.07
SCFD1-218ENST00000556256 ADAM22Q9P0K1 906 aa2.12□□□□□ -2.07
SCFD1-218ENST00000556256 Q9UF83 564 aa2.12□□□□□ -2.07
SCFD1-218ENST00000556256 CYTH4Q9UIA0 394 aa2.12□□□□□ -2.07
SCFD1-218ENST00000556256 WI2-2373I1.2A0A1W2PRP0 233 aa2.11□□□□□ -2.07
SCFD1-218ENST00000556256 ZSCAN5BA6NJL1 495 aa2.11□□□□□ -2.07
SCFD1-218ENST00000556256 EFCAB7A8K855 629 aa2.11□□□□□ -2.07
SCFD1-218ENST00000556256 A8MX80 341 aa2.11□□□□□ -2.07
SCFD1-218ENST00000556256 NUDT21O43809 227 aaKnown RBP2.11□□□□□ -2.07
SCFD1-218ENST00000556256 SMPD2O60906 423 aa2.11□□□□□ -2.07
SCFD1-218ENST00000556256 SCGB2A1O75556 95 aa2.11□□□□□ -2.07
SCFD1-218ENST00000556256 OPN1LWP04000 364 aa2.11□□□□□ -2.07
SCFD1-218ENST00000556256 IGFBP1P08833 259 aaPredicted RBP2.11□□□□□ -2.07
SCFD1-218ENST00000556256 H2AFZP0C0S5 128 aa2.11□□□□□ -2.07
SCFD1-218ENST00000556256 BCKDHAP12694 445 aa2.11□□□□□ -2.07
SCFD1-218ENST00000556256 NCF1P14598 390 aaPredicted RBP2.11□□□□□ -2.07
SCFD1-218ENST00000556256 UQCRBP14927 111 aa2.11□□□□□ -2.07
SCFD1-218ENST00000556256 PGAM2P15259 253 aa2.11□□□□□ -2.07
SCFD1-218ENST00000556256 IDSP22304 550 aa2.11□□□□□ -2.07
SCFD1-218ENST00000556256 IGHV1-2P23083 117 aa2.11□□□□□ -2.07
SCFD1-218ENST00000556256 CYP2F1P24903 491 aa2.11□□□□□ -2.07
SCFD1-218ENST00000556256 IL2RGP31785 369 aa2.11□□□□□ -2.07
SCFD1-218ENST00000556256 ACAA2P42765 397 aaKnown RBP2.11□□□□□ -2.07
SCFD1-218ENST00000556256 MAGEA9P43362 315 aa2.11□□□□□ -2.07
SCFD1-218ENST00000556256 XCR1P46094 333 aa2.11□□□□□ -2.07
SCFD1-218ENST00000556256 ACADVLP49748 655 aa2.11□□□□□ -2.07
SCFD1-218ENST00000556256 MEOX2P50222 304 aa2.11□□□□□ -2.07
SCFD1-218ENST00000556256 SLC25A1P53007 311 aa2.11□□□□□ -2.07
SCFD1-218ENST00000556256 PLOD1Q02809 727 aaPredicted RBP2.11□□□□□ -2.07
SCFD1-218ENST00000556256 CAMK4Q16566 473 aa2.11□□□□□ -2.07
SCFD1-218ENST00000556256 CYP51A1Q16850 503 aa2.11□□□□□ -2.07
SCFD1-218ENST00000556256 PAN3Q58A45 887 aaKnown RBP2.11□□□□□ -2.07
SCFD1-218ENST00000556256 TMEM41BQ5BJD5 291 aa2.11□□□□□ -2.07
SCFD1-218ENST00000556256 ZNF311Q5JNZ3 666 aa2.11□□□□□ -2.07
SCFD1-218ENST00000556256 DCST2Q5T1A1 773 aa2.11□□□□□ -2.07
SCFD1-218ENST00000556256 PVRIGQ6DKI7 326 aa2.11□□□□□ -2.07
SCFD1-218ENST00000556256 UFSP1Q6NVU6 142 aa2.11□□□□□ -2.07
SCFD1-218ENST00000556256 HSD11B1LQ7Z5J1 315 aa2.11□□□□□ -2.07
SCFD1-218ENST00000556256 ANKRD37Q7Z713 158 aa2.11□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms