RNA–Protein interactions for RNA: ENST00000555569.1

PCNX4-209, Transcript of pecanex 4, humanhuman

TSL 3

Gene PCNX4, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-209ENST00000555569 SKAP2O75563 359 aaPredicted RBP12.48□□□□□ -0.41
PCNX4-209ENST00000555569 ANGPTL1O95841 491 aa12.48□□□□□ -0.41
PCNX4-209ENST00000555569 EFNA1P20827 205 aaPredicted RBP12.48□□□□□ -0.41
PCNX4-209ENST00000555569 RPL3P39023 403 aaKnown RBP12.48□□□□□ -0.41
PCNX4-209ENST00000555569 EEF1A1P68104 462 aaKnown RBP12.48□□□□□ -0.41
PCNX4-209ENST00000555569 PRR5P85299 388 aa12.48□□□□□ -0.41
PCNX4-209ENST00000555569 SORDQ00796 357 aa12.48□□□□□ -0.41
PCNX4-209ENST00000555569 C17orf67Q0P5P2 114 aa12.48□□□□□ -0.41
PCNX4-209ENST00000555569 EEF1A1P5Q5VTE0 462 aa12.48□□□□□ -0.41
PCNX4-209ENST00000555569 ZCCHC12Q6PEW1 402 aa12.48□□□□□ -0.41
PCNX4-209ENST00000555569 APOOLQ6UXV4 268 aa12.48□□□□□ -0.41
PCNX4-209ENST00000555569 P4HA3Q7Z4N8 544 aa12.48□□□□□ -0.41
PCNX4-209ENST00000555569 UBQLNLQ8IYU4 475 aa12.48□□□□□ -0.41
PCNX4-209ENST00000555569 GCNT2Q8N0V5 402 aa12.48□□□□□ -0.41
PCNX4-209ENST00000555569 MREGQ8N565 214 aa12.48□□□□□ -0.41
PCNX4-209ENST00000555569 MEIOBQ8N635 442 aa12.48□□□□□ -0.41
PCNX4-209ENST00000555569 OR7A2PQ8NGA2 310 aa12.48□□□□□ -0.41
PCNX4-209ENST00000555569 GOT1L1Q8NHS2 421 aaPredicted RBP12.48□□□□□ -0.41
PCNX4-209ENST00000555569 FBXO30Q8TB52 745 aa12.48□□□□□ -0.41
PCNX4-209ENST00000555569 NRGNQ92686 78 aa12.48□□□□□ -0.41
PCNX4-209ENST00000555569 C1GALT1C1Q96EU7 318 aa12.48□□□□□ -0.41
PCNX4-209ENST00000555569 C3orf30Q96M34 536 aa12.48□□□□□ -0.41
PCNX4-209ENST00000555569 RBM24Q9BX46 236 aaKnown RBP12.48□□□□□ -0.41
PCNX4-209ENST00000555569 PIGMQ9H3S5 423 aa12.48□□□□□ -0.41
PCNX4-209ENST00000555569 RASSF1Q9NS23 344 aa12.48□□□□□ -0.41
PCNX4-209ENST00000555569 ZDHHC2Q9UIJ5 367 aa12.48□□□□□ -0.41
PCNX4-209ENST00000555569 A0A1W2PRB8 838 aa12.47□□□□□ -0.41
PCNX4-209ENST00000555569 OR2M5A3KFT3 312 aa12.47□□□□□ -0.41
PCNX4-209ENST00000555569 OXSR1O95747 527 aaPredicted RBP12.47□□□□□ -0.41
PCNX4-209ENST00000555569 TGM6O95932 706 aa12.47□□□□□ -0.41
PCNX4-209ENST00000555569 NGFRP08138 427 aa12.47□□□□□ -0.41
PCNX4-209ENST00000555569 ALOX5P09917 674 aa12.47□□□□□ -0.41
PCNX4-209ENST00000555569 DNAJA1P31689 397 aaKnown RBP12.47□□□□□ -0.41
PCNX4-209ENST00000555569 ETV4P43268 484 aa12.47□□□□□ -0.41
PCNX4-209ENST00000555569 CPA2P48052 419 aa12.47□□□□□ -0.41
PCNX4-209ENST00000555569 PRIM2P49643 509 aa12.47□□□□□ -0.41
PCNX4-209ENST00000555569 EEFSECP57772 596 aaKnown RBP12.47□□□□□ -0.41
PCNX4-209ENST00000555569 DAZAP2Q15038 168 aaPredicted RBP12.47□□□□□ -0.41
PCNX4-209ENST00000555569 MLC1Q15049 377 aa12.47□□□□□ -0.41
PCNX4-209ENST00000555569 DUSP5Q16690 384 aa12.47□□□□□ -0.41
PCNX4-209ENST00000555569 KRT71Q3SY84 523 aa12.47□□□□□ -0.41
PCNX4-209ENST00000555569 GLYR1Q49A26 553 aaPredicted RBP12.47□□□□□ -0.41
PCNX4-209ENST00000555569 C6orf136Q5SQH8 315 aa12.47□□□□□ -0.41
PCNX4-209ENST00000555569 MFSD12Q6NUT3 480 aa12.47□□□□□ -0.41
PCNX4-209ENST00000555569 FIGNL1Q6PIW4 674 aa12.47□□□□□ -0.41
PCNX4-209ENST00000555569 SPNS3Q6ZMD2 512 aa12.47□□□□□ -0.41
PCNX4-209ENST00000555569 GALNT10Q86SR1 603 aa12.47□□□□□ -0.41
PCNX4-209ENST00000555569 LUZP2Q86TE4 346 aa12.47□□□□□ -0.41
PCNX4-209ENST00000555569 SLC16A11Q8NCK7 471 aa12.47□□□□□ -0.41
PCNX4-209ENST00000555569 OR5M1Q8NGP8 315 aa12.47□□□□□ -0.41
PCNX4-209ENST00000555569 OR6Y1Q8NGX8 325 aa12.47□□□□□ -0.41
PCNX4-209ENST00000555569 FAM110BQ8TC76 370 aa12.47□□□□□ -0.41
PCNX4-209ENST00000555569 FAM120BQ96EK7 910 aaKnown RBP12.47□□□□□ -0.41
PCNX4-209ENST00000555569 C16orf58Q96GQ5 468 aa12.47□□□□□ -0.41
PCNX4-209ENST00000555569 PIGQQ9BRB3 760 aa12.47□□□□□ -0.41
PCNX4-209ENST00000555569 C1orf50Q9BV19 199 aa12.47□□□□□ -0.41
PCNX4-209ENST00000555569 CLEC4MQ9H2X3 399 aaPredicted RBP12.47□□□□□ -0.41
PCNX4-209ENST00000555569 HHATLQ9HCP6 504 aa12.47□□□□□ -0.41
PCNX4-209ENST00000555569 SIRT3Q9NTG7 399 aaPredicted RBP12.47□□□□□ -0.41
PCNX4-209ENST00000555569 ZNF337Q9Y3M9 751 aa12.47□□□□□ -0.41
PCNX4-209ENST00000555569 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.46□□□□□ -0.41
PCNX4-209ENST00000555569 A0A1W2PNV4 684 aa12.46□□□□□ -0.41
PCNX4-209ENST00000555569 SLC22A20A6NK97 555 aa12.46□□□□□ -0.41
PCNX4-209ENST00000555569 ALG1L2C9J202 215 aa12.46□□□□□ -0.41
PCNX4-209ENST00000555569 H3BML4 177 aa12.46□□□□□ -0.41
PCNX4-209ENST00000555569 SEC14L5O43304 696 aa12.46□□□□□ -0.41
PCNX4-209ENST00000555569 CTIFO43310 598 aaKnown RBP12.46□□□□□ -0.41
PCNX4-209ENST00000555569 NDUFB5O43674 189 aa12.46□□□□□ -0.41
PCNX4-209ENST00000555569 GMFGO60234 142 aa12.46□□□□□ -0.41
PCNX4-209ENST00000555569 LYPLA1O75608 230 aaPredicted RBP12.46□□□□□ -0.41
PCNX4-209ENST00000555569 TNFSF13O75888 250 aa12.46□□□□□ -0.41
PCNX4-209ENST00000555569 KCNK2O95069 426 aa12.46□□□□□ -0.41
PCNX4-209ENST00000555569 CRHP06850 196 aa12.46□□□□□ -0.41
PCNX4-209ENST00000555569 LAMP1P11279 417 aa12.46□□□□□ -0.41
PCNX4-209ENST00000555569 EPXP11678 715 aa12.46□□□□□ -0.41
PCNX4-209ENST00000555569 TBXA2RP21731 343 aa12.46□□□□□ -0.41
PCNX4-209ENST00000555569 LCN1P31025 176 aa12.46□□□□□ -0.41
PCNX4-209ENST00000555569 ART1P52961 327 aa12.46□□□□□ -0.41
PCNX4-209ENST00000555569 SUCLG1P53597 346 aaKnown RBP12.46□□□□□ -0.41
PCNX4-209ENST00000555569 DIO3P55073 304 aa12.46□□□□□ -0.41
PCNX4-209ENST00000555569 CLDN15P56746 228 aa12.46□□□□□ -0.41
PCNX4-209ENST00000555569 PTGR1Q14914 329 aa12.46□□□□□ -0.41
PCNX4-209ENST00000555569 CPEB4Q17RY0 729 aaKnown RBP eCLIP12.46□□□□□ -0.41
PCNX4-209ENST00000555569 EXOSC6Q5RKV6 272 aaKnown RBP12.46□□□□□ -0.41
PCNX4-209ENST00000555569 CPTPQ5TA50 214 aa12.46□□□□□ -0.41
PCNX4-209ENST00000555569 IL23RQ5VWK5 629 aa12.46□□□□□ -0.41
PCNX4-209ENST00000555569 OR2A2Q6IF42 318 aa12.46□□□□□ -0.41
PCNX4-209ENST00000555569 ZAR1Q86SH2 424 aa12.46□□□□□ -0.41
PCNX4-209ENST00000555569 NUDCD3Q8IVD9 361 aa12.46□□□□□ -0.41
PCNX4-209ENST00000555569 COX18Q8N8Q8 333 aa12.46□□□□□ -0.41
PCNX4-209ENST00000555569 FNDC5Q8NAU1 212 aa12.46□□□□□ -0.41
PCNX4-209ENST00000555569 OR4C3Q8NH37 302 aa12.46□□□□□ -0.41
PCNX4-209ENST00000555569 PPP1R14CQ8TAE6 165 aa12.46□□□□□ -0.41
PCNX4-209ENST00000555569 LINC01560Q8TB33 94 aa12.46□□□□□ -0.41
PCNX4-209ENST00000555569 OR5P2Q8WZ92 322 aa12.46□□□□□ -0.41
PCNX4-209ENST00000555569 SMPDL3BQ92485 455 aa12.46□□□□□ -0.41
PCNX4-209ENST00000555569 JADE3Q92613 823 aa12.46□□□□□ -0.41
PCNX4-209ENST00000555569 OTUB1Q96FW1 271 aaPredicted RBP12.46□□□□□ -0.41
PCNX4-209ENST00000555569 PKNOX2Q96KN3 472 aa12.46□□□□□ -0.41
PCNX4-209ENST00000555569 YIPF4Q9BSR8 244 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms