RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 UTP14AQ9BVJ6 771 aaKnown RBP1.29□□□□□ -2.2
SRP54-207ENST00000555535 RNPEPL1Q9HAU8 725 aa1.29□□□□□ -2.2
SRP54-207ENST00000555535 FAM114A2Q9NRY5 505 aa1.29□□□□□ -2.2
SRP54-207ENST00000555535 PRPF19Q9UMS4 504 aaKnown RBP1.29□□□□□ -2.2
SRP54-207ENST00000555535 FOXA2Q9Y261 457 aaPredicted RBP1.29□□□□□ -2.2
SRP54-207ENST00000555535 MRPS2Q9Y399 296 aaKnown RBP1.29□□□□□ -2.2
SRP54-207ENST00000555535 AIREO43918 545 aa1.28□□□□□ -2.2
SRP54-207ENST00000555535 SERPINF2P08697 491 aa1.28□□□□□ -2.2
SRP54-207ENST00000555535 HPDP32754 393 aaPredicted RBP1.28□□□□□ -2.2
SRP54-207ENST00000555535 RFC2P35250 354 aa1.28□□□□□ -2.2
SRP54-207ENST00000555535 ANKRD20A4Q4UJ75 823 aa1.28□□□□□ -2.2
SRP54-207ENST00000555535 ANKRD20A8PQ5CZ79 823 aa1.28□□□□□ -2.2
SRP54-207ENST00000555535 ANKRD20A2Q5SQ80 823 aa1.28□□□□□ -2.2
SRP54-207ENST00000555535 FAM120AOSQ5T036 256 aa1.28□□□□□ -2.2
SRP54-207ENST00000555535 ANKRD20A1Q5TYW2 823 aa1.28□□□□□ -2.2
SRP54-207ENST00000555535 ANKRD20A3Q5VUR7 823 aa1.28□□□□□ -2.2
SRP54-207ENST00000555535 PRAMEF8Q5VWM4 474 aa1.28□□□□□ -2.2
SRP54-207ENST00000555535 NKAIN2Q5VXU1 208 aa1.28□□□□□ -2.2
SRP54-207ENST00000555535 ARSKQ6UWY0 536 aa1.28□□□□□ -2.2
SRP54-207ENST00000555535 DPY19L2P2Q6ZN68 376 aa1.28□□□□□ -2.2
SRP54-207ENST00000555535 TMEM37Q8WXS4 190 aa1.28□□□□□ -2.2
SRP54-207ENST00000555535 DEFB118Q96PH6 123 aa1.28□□□□□ -2.2
SRP54-207ENST00000555535 ARHGDIGQ99819 225 aa1.28□□□□□ -2.2
SRP54-207ENST00000555535 AP1M1Q9BXS5 423 aa1.28□□□□□ -2.2
SRP54-207ENST00000555535 EDEM3Q9BZQ6 932 aa1.28□□□□□ -2.2
SRP54-207ENST00000555535 ZDHHC11Q9H8X9 412 aa1.28□□□□□ -2.2
SRP54-207ENST00000555535 SH2D2AQ9NP31 389 aa1.28□□□□□ -2.2
SRP54-207ENST00000555535 DCAF13Q9NV06 445 aaKnown RBP1.28□□□□□ -2.2
SRP54-207ENST00000555535 ANKMY1Q9P2S6 941 aa1.28□□□□□ -2.2
SRP54-207ENST00000555535 MARCOQ9UEW3 520 aaPredicted RBP1.28□□□□□ -2.2
SRP54-207ENST00000555535 MIOXQ9UGB7 285 aa1.28□□□□□ -2.2
SRP54-207ENST00000555535 FZR1Q9UM11 496 aa1.28□□□□□ -2.2
SRP54-207ENST00000555535 SMC3Q9UQE7 1217 aa1.28□□□□□ -2.2
SRP54-207ENST00000555535 ENTPD4Q9Y227 616 aa1.28□□□□□ -2.2
SRP54-207ENST00000555535 NPC1L1Q9UHC9 1359 aa1.28□□□□□ -2.2
SRP54-207ENST00000555535 GRIN2DO15399 1336 aa1.27□□□□□ -2.21
SRP54-207ENST00000555535 SAGE2PA6NJ88 616 aa1.27□□□□□ -2.21
SRP54-207ENST00000555535 GJE1A6NN92 205 aa1.27□□□□□ -2.21
SRP54-207ENST00000555535 H3BMH7 237 aa1.27□□□□□ -2.21
SRP54-207ENST00000555535 CHEK1O14757 476 aa1.27□□□□□ -2.21
SRP54-207ENST00000555535 RAMP1O60894 148 aa1.27□□□□□ -2.21
SRP54-207ENST00000555535 CHRNA1P02708 482 aa1.27□□□□□ -2.21
SRP54-207ENST00000555535 SFTPBP07988 381 aa1.27□□□□□ -2.21
SRP54-207ENST00000555535 HIST1H2AGP0C0S8 130 aaPredicted RBP1.27□□□□□ -2.21
SRP54-207ENST00000555535 CELP19835 753 aa1.27□□□□□ -2.21
SRP54-207ENST00000555535 CCNA2P20248 432 aa1.27□□□□□ -2.21
SRP54-207ENST00000555535 SMSP52788 366 aa1.27□□□□□ -2.21
SRP54-207ENST00000555535 PLOD1Q02809 727 aaPredicted RBP1.27□□□□□ -2.21
SRP54-207ENST00000555535 ZNF154Q13106 437 aa1.27□□□□□ -2.21
SRP54-207ENST00000555535 MEP1BQ16820 701 aa1.27□□□□□ -2.21
SRP54-207ENST00000555535 KBTBD12Q3ZCT8 623 aa1.27□□□□□ -2.21
SRP54-207ENST00000555535 CHRFAM7AQ494W8 412 aa1.27□□□□□ -2.21
SRP54-207ENST00000555535 TEX44Q53QW1 395 aa1.27□□□□□ -2.21
SRP54-207ENST00000555535 HIST2H2AA3Q6FI13 130 aa1.27□□□□□ -2.21
SRP54-207ENST00000555535 SLC25A34Q6PIV7 304 aa1.27□□□□□ -2.21
SRP54-207ENST00000555535 HIST2H2ABQ8IUE6 130 aaPredicted RBP1.27□□□□□ -2.21
SRP54-207ENST00000555535 CLYBLQ8N0X4 340 aa1.27□□□□□ -2.21
SRP54-207ENST00000555535 NAT8LQ8N9F0 302 aa1.27□□□□□ -2.21
SRP54-207ENST00000555535 ZNF740Q8NDX6 193 aa1.27□□□□□ -2.21
SRP54-207ENST00000555535 OR51G1Q8NGK1 321 aa1.27□□□□□ -2.21
SRP54-207ENST00000555535 CHCHD10Q8WYQ3 142 aaPredicted RBP1.27□□□□□ -2.21
SRP54-207ENST00000555535 TMEM158Q8WZ71 300 aa1.27□□□□□ -2.21
SRP54-207ENST00000555535 HIST1H2ACQ93077 130 aa1.27□□□□□ -2.21
SRP54-207ENST00000555535 RPUSD4Q96CM3 377 aaKnown RBP1.27□□□□□ -2.21
SRP54-207ENST00000555535 FAM210BQ96KR6 192 aa1.27□□□□□ -2.21
SRP54-207ENST00000555535 ZNF641Q96N77 438 aaPredicted RBP1.27□□□□□ -2.21
SRP54-207ENST00000555535 TSPYL1Q9H0U9 437 aa1.27□□□□□ -2.21
SRP54-207ENST00000555535 OPN4Q9UHM6 478 aa1.27□□□□□ -2.21
SRP54-207ENST00000555535 NARFQ9UHQ1 456 aa1.27□□□□□ -2.21
SRP54-207ENST00000555535 UBQLN1Q9UMX0 589 aaKnown RBP1.27□□□□□ -2.21
SRP54-207ENST00000555535 ERVW-1Q9UQF0 538 aa1.27□□□□□ -2.21
SRP54-207ENST00000555535 SCN2AQ99250 2005 aa1.27□□□□□ -2.21
SRP54-207ENST00000555535 BRWD3Q6RI45 1802 aa1.26□□□□□ -2.21
SRP54-207ENST00000555535 MUC6Q6W4X9 2439 aa1.26□□□□□ -2.21
SRP54-207ENST00000555535 COLCA2A8K830 154 aa1.26□□□□□ -2.21
SRP54-207ENST00000555535 ARPC1BO15143 372 aaKnown RBP1.26□□□□□ -2.21
SRP54-207ENST00000555535 AKR7A3O95154 331 aa1.26□□□□□ -2.21
SRP54-207ENST00000555535 KLF8O95600 359 aaPredicted RBP1.26□□□□□ -2.21
SRP54-207ENST00000555535 SLC25A27O95847 323 aa1.26□□□□□ -2.21
SRP54-207ENST00000555535 IGKV4-1P06312 121 aa1.26□□□□□ -2.21
SRP54-207ENST00000555535 VCLP18206 1134 aa1.26□□□□□ -2.21
SRP54-207ENST00000555535 NTSP30990 170 aa1.26□□□□□ -2.21
SRP54-207ENST00000555535 OTX2P32243 289 aa1.26□□□□□ -2.21
SRP54-207ENST00000555535 ACTA1P68133 377 aa1.26□□□□□ -2.21
SRP54-207ENST00000555535 NOP14P78316 857 aaKnown RBP1.26□□□□□ -2.21
SRP54-207ENST00000555535 CFAP221Q4G0U5 840 aa1.26□□□□□ -2.21
SRP54-207ENST00000555535 CWC27Q6UX04 472 aaKnown RBP1.26□□□□□ -2.21
SRP54-207ENST00000555535 STAC2Q6ZMT1 411 aa1.26□□□□□ -2.21
SRP54-207ENST00000555535 LCA5Q86VQ0 697 aa1.26□□□□□ -2.21
SRP54-207ENST00000555535 SERPINA9Q86WD7 417 aa1.26□□□□□ -2.21
SRP54-207ENST00000555535 MMAAQ8IVH4 418 aaKnown RBP1.26□□□□□ -2.21
SRP54-207ENST00000555535 SKA3Q8IX90 412 aa1.26□□□□□ -2.21
SRP54-207ENST00000555535 GCNT2Q8N0V5 402 aa1.26□□□□□ -2.21
SRP54-207ENST00000555535 MTURNQ8N3F0 131 aa1.26□□□□□ -2.21
SRP54-207ENST00000555535 OR52I1Q8NGK6 324 aa1.26□□□□□ -2.21
SRP54-207ENST00000555535 OR9A1PQ8NGU1 263 aa1.26□□□□□ -2.21
SRP54-207ENST00000555535 TSPAN18Q96SJ8 248 aa1.26□□□□□ -2.21
SRP54-207ENST00000555535 CARD6Q9BX69 1037 aa1.26□□□□□ -2.21
SRP54-207ENST00000555535 CAB39LQ9H9S4 337 aa1.26□□□□□ -2.21
SRP54-207ENST00000555535 DYNC1LI1Q9Y6G9 523 aaKnown RBP1.26□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms