RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 POGLUT1Q8NBL1 392 aa11.62□□□□□ -0.55
SYNE2-219ENST00000555323 OR5M3Q8NGP4 307 aa11.62□□□□□ -0.55
SYNE2-219ENST00000555323 FBXO27Q8NI29 283 aa11.62□□□□□ -0.55
SYNE2-219ENST00000555323 MAL2Q969L2 176 aa11.62□□□□□ -0.55
SYNE2-219ENST00000555323 ZG16BQ96DA0 208 aa11.62□□□□□ -0.55
SYNE2-219ENST00000555323 HES7Q9BYE0 225 aa11.62□□□□□ -0.55
SYNE2-219ENST00000555323 RUBCNLQ9H714 662 aa11.62□□□□□ -0.55
SYNE2-219ENST00000555323 DEPPQ9NTK1 212 aa11.62□□□□□ -0.55
SYNE2-219ENST00000555323 FLRT3Q9NZU0 649 aa11.62□□□□□ -0.55
SYNE2-219ENST00000555323 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.62□□□□□ -0.55
SYNE2-219ENST00000555323 SUCOQ9UBS9 1254 aaKnown RBP11.62□□□□□ -0.55
SYNE2-219ENST00000555323 WDR45Q9Y484 360 aa11.62□□□□□ -0.55
SYNE2-219ENST00000555323 EPG5Q9HCE0 2579 aa11.62□□□□□ -0.55
SYNE2-219ENST00000555323 TMEM247A6NEH6 219 aa11.61□□□□□ -0.55
SYNE2-219ENST00000555323 PRAMEF25A6NGN4 478 aa11.61□□□□□ -0.55
SYNE2-219ENST00000555323 PEX1O43933 1283 aa11.61□□□□□ -0.55
SYNE2-219ENST00000555323 KIAA0513O60268 411 aa11.61□□□□□ -0.55
SYNE2-219ENST00000555323 TRIM3O75382 744 aaPredicted RBP11.61□□□□□ -0.55
SYNE2-219ENST00000555323 UGT2B17O75795 530 aa11.61□□□□□ -0.55
SYNE2-219ENST00000555323 PGM3O95394 542 aa11.61□□□□□ -0.55
SYNE2-219ENST00000555323 OXSR1O95747 527 aaPredicted RBP11.61□□□□□ -0.55
SYNE2-219ENST00000555323 ETS2P15036 469 aa11.61□□□□□ -0.55
SYNE2-219ENST00000555323 EVI2BP34910 448 aa11.61□□□□□ -0.55
SYNE2-219ENST00000555323 RFX3P48380 749 aa11.61□□□□□ -0.55
SYNE2-219ENST00000555323 SLC7A2P52569 658 aa11.61□□□□□ -0.55
SYNE2-219ENST00000555323 EEFSECP57772 596 aaKnown RBP11.61□□□□□ -0.55
SYNE2-219ENST00000555323 SLC25A3Q00325 362 aa11.61□□□□□ -0.55
SYNE2-219ENST00000555323 CDK6Q00534 326 aa11.61□□□□□ -0.55
SYNE2-219ENST00000555323 FOXO1Q12778 655 aa11.61□□□□□ -0.55
SYNE2-219ENST00000555323 VEZF1Q14119 521 aa11.61□□□□□ -0.55
SYNE2-219ENST00000555323 INAQ16352 499 aa11.61□□□□□ -0.55
SYNE2-219ENST00000555323 HYAL4Q2M3T9 481 aa11.61□□□□□ -0.55
SYNE2-219ENST00000555323 FLYWCH1Q4VC44 716 aa11.61□□□□□ -0.55
SYNE2-219ENST00000555323 REEP3Q6NUK4 255 aa11.61□□□□□ -0.55
SYNE2-219ENST00000555323 C16orf89Q6UX73 402 aa11.61□□□□□ -0.55
SYNE2-219ENST00000555323 GALNT10Q86SR1 603 aa11.61□□□□□ -0.55
SYNE2-219ENST00000555323 SLC30A8Q8IWU4 369 aa11.61□□□□□ -0.55
SYNE2-219ENST00000555323 ZZZ3Q8IYH5 903 aa11.61□□□□□ -0.55
SYNE2-219ENST00000555323 ZFP62Q8NB50 900 aaPredicted RBP11.61□□□□□ -0.55
SYNE2-219ENST00000555323 C11orf65Q8NCR3 313 aa11.61□□□□□ -0.55
SYNE2-219ENST00000555323 RBM15BQ8NDT2 890 aaKnown RBP11.61□□□□□ -0.55
SYNE2-219ENST00000555323 TMEM19Q96HH6 336 aa11.61□□□□□ -0.55
SYNE2-219ENST00000555323 TMEM41AQ96HV5 264 aa11.61□□□□□ -0.55
SYNE2-219ENST00000555323 REXO5Q96IC2 774 aaKnown RBP11.61□□□□□ -0.55
SYNE2-219ENST00000555323 TREX2Q9BQ50 279 aaPredicted RBP11.61□□□□□ -0.55
SYNE2-219ENST00000555323 FAM173AQ9BQD7 235 aa11.61□□□□□ -0.55
SYNE2-219ENST00000555323 MFRPQ9BY79 579 aa11.61□□□□□ -0.55
SYNE2-219ENST00000555323 HHATLQ9HCP6 504 aa11.61□□□□□ -0.55
SYNE2-219ENST00000555323 SPAG4Q9NPE6 437 aa11.61□□□□□ -0.55
SYNE2-219ENST00000555323 TAS2R1Q9NYW7 299 aa11.61□□□□□ -0.55
SYNE2-219ENST00000555323 KCNE5Q9UJ90 142 aa11.61□□□□□ -0.55
SYNE2-219ENST00000555323 MKLN1Q9UL63 735 aa11.61□□□□□ -0.55
SYNE2-219ENST00000555323 L3MBTL1Q9Y468 752 aa11.61□□□□□ -0.55
SYNE2-219ENST00000555323 DTNAQ9Y4J8 743 aa11.61□□□□□ -0.55
SYNE2-219ENST00000555323 AGAP5A6NIR3 686 aa11.6□□□□□ -0.55
SYNE2-219ENST00000555323 NME4O00746 187 aa11.6□□□□□ -0.55
SYNE2-219ENST00000555323 SLC28A2O43868 658 aa11.6□□□□□ -0.55
SYNE2-219ENST00000555323 DNAJA2O60884 412 aa11.6□□□□□ -0.55
SYNE2-219ENST00000555323 SORBS2O94875 1100 aaKnown RBP11.6□□□□□ -0.55
SYNE2-219ENST00000555323 BCHEP06276 602 aa11.6□□□□□ -0.55
SYNE2-219ENST00000555323 ENDOUP21128 410 aaKnown RBP11.6□□□□□ -0.55
SYNE2-219ENST00000555323 RPS4Y1P22090 263 aaKnown RBP11.6□□□□□ -0.55
SYNE2-219ENST00000555323 DCTP40126 519 aa11.6□□□□□ -0.55
SYNE2-219ENST00000555323 CLK3P49761 638 aaKnown RBP11.6□□□□□ -0.55
SYNE2-219ENST00000555323 PCBP3P57721 371 aaKnown RBP11.6□□□□□ -0.55
SYNE2-219ENST00000555323 C17orf67Q0P5P2 114 aa11.6□□□□□ -0.55
SYNE2-219ENST00000555323 SCARB2Q14108 478 aa11.6□□□□□ -0.55
SYNE2-219ENST00000555323 GPR68Q15743 365 aa11.6□□□□□ -0.55
SYNE2-219ENST00000555323 CYP51A1Q16850 503 aa11.6□□□□□ -0.55
SYNE2-219ENST00000555323 VMACQ2NL98 169 aa11.6□□□□□ -0.55
SYNE2-219ENST00000555323 SPATS1Q496A3 300 aa11.6□□□□□ -0.55
SYNE2-219ENST00000555323 PRAMEF20Q5VT98 475 aa11.6□□□□□ -0.55
SYNE2-219ENST00000555323 FNDC7Q5VTL7 733 aa11.6□□□□□ -0.55
SYNE2-219ENST00000555323 BICRALQ6AI39 1079 aa11.6□□□□□ -0.55
SYNE2-219ENST00000555323 ERICH5Q6P6B1 374 aa11.6□□□□□ -0.55
SYNE2-219ENST00000555323 BNC2Q6ZN30 1099 aaPredicted RBP11.6□□□□□ -0.55
SYNE2-219ENST00000555323 RINLQ6ZS11 566 aa11.6□□□□□ -0.55
SYNE2-219ENST00000555323 PACS2Q86VP3 889 aa11.6□□□□□ -0.55
SYNE2-219ENST00000555323 WDSUB1Q8N9V3 476 aa11.6□□□□□ -0.55
SYNE2-219ENST00000555323 ZNF527Q8NB42 609 aa11.6□□□□□ -0.55
SYNE2-219ENST00000555323 HIPK4Q8NE63 616 aa11.6□□□□□ -0.55
SYNE2-219ENST00000555323 OR2M7Q8NG81 312 aa11.6□□□□□ -0.55
SYNE2-219ENST00000555323 SLC7A6OSQ96CW6 309 aaPredicted RBP11.6□□□□□ -0.55
SYNE2-219ENST00000555323 DOHHQ9BU89 302 aa11.6□□□□□ -0.55
SYNE2-219ENST00000555323 RTN4RQ9BZR6 473 aa11.6□□□□□ -0.55
SYNE2-219ENST00000555323 METTL7AQ9H8H3 244 aa11.6□□□□□ -0.55
SYNE2-219ENST00000555323 KLHL1Q9NR64 748 aa11.6□□□□□ -0.55
SYNE2-219ENST00000555323 SDHAF3Q9NRP4 125 aa11.6□□□□□ -0.55
SYNE2-219ENST00000555323 CD300AQ9UGN4 299 aa11.6□□□□□ -0.55
SYNE2-219ENST00000555323 ANAPC2Q9UJX6 822 aa11.6□□□□□ -0.55
SYNE2-219ENST00000555323 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.6□□□□□ -0.55
SYNE2-219ENST00000555323 IGLV3-32A0A0A0MS00 114 aa11.59□□□□□ -0.55
SYNE2-219ENST00000555323 PINLYPA6NC86 204 aa11.59□□□□□ -0.55
SYNE2-219ENST00000555323 FAM220BPB1ANY3 271 aa11.59□□□□□ -0.55
SYNE2-219ENST00000555323 SCDO00767 359 aa11.59□□□□□ -0.55
SYNE2-219ENST00000555323 GCM2O75603 506 aaPredicted RBP11.59□□□□□ -0.55
SYNE2-219ENST00000555323 ATP5HO75947 161 aa11.59□□□□□ -0.55
SYNE2-219ENST00000555323 GLSO94925 669 aaPredicted RBP11.59□□□□□ -0.55
SYNE2-219ENST00000555323 RASAL1O95294 804 aa11.59□□□□□ -0.55
SYNE2-219ENST00000555323 ANGPTL1O95841 491 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms