RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 FAM47E-STBD1D6RA91 191 aa11.02□□□□□ -0.65
SRP54-206ENST00000555317 H3BNH8 94 aa11.02□□□□□ -0.65
SRP54-206ENST00000555317 NDUFB5O43674 189 aa11.02□□□□□ -0.65
SRP54-206ENST00000555317 FADS1O60427 444 aa11.02□□□□□ -0.65
SRP54-206ENST00000555317 ANGPTL1O95841 491 aa11.02□□□□□ -0.65
SRP54-206ENST00000555317 AGR2O95994 175 aa11.02□□□□□ -0.65
SRP54-206ENST00000555317 AK1P00568 194 aa11.02□□□□□ -0.65
SRP54-206ENST00000555317 IGKV1D-16P01601 117 aa11.02□□□□□ -0.65
SRP54-206ENST00000555317 HOXD4P09016 255 aaPredicted RBP11.02□□□□□ -0.65
SRP54-206ENST00000555317 ENDOUP21128 410 aaKnown RBP11.02□□□□□ -0.65
SRP54-206ENST00000555317 MATN1P21941 496 aa11.02□□□□□ -0.65
SRP54-206ENST00000555317 TCEA1P23193 301 aaKnown RBP11.02□□□□□ -0.65
SRP54-206ENST00000555317 DPP4P27487 766 aa11.02□□□□□ -0.65
SRP54-206ENST00000555317 SRD5A2P31213 254 aa11.02□□□□□ -0.65
SRP54-206ENST00000555317 PTGER4P35408 488 aa11.02□□□□□ -0.65
SRP54-206ENST00000555317 MAP3K8P41279 467 aa11.02□□□□□ -0.65
SRP54-206ENST00000555317 KHKP50053 298 aa11.02□□□□□ -0.65
SRP54-206ENST00000555317 ANXA11P50995 505 aaKnown RBP11.02□□□□□ -0.65
SRP54-206ENST00000555317 DGKQP52824 942 aa11.02□□□□□ -0.65
SRP54-206ENST00000555317 WNT3P56703 355 aa11.02□□□□□ -0.65
SRP54-206ENST00000555317 RPS26P62854 115 aaKnown RBP11.02□□□□□ -0.65
SRP54-206ENST00000555317 GANABQ14697 944 aaKnown RBP11.02□□□□□ -0.65
SRP54-206ENST00000555317 DCST2Q5T1A1 773 aa11.02□□□□□ -0.65
SRP54-206ENST00000555317 CCNJQ5T5M9 372 aa11.02□□□□□ -0.65
SRP54-206ENST00000555317 C1orf185Q5T7R7 199 aa11.02□□□□□ -0.65
SRP54-206ENST00000555317 AAGABQ6PD74 315 aa11.02□□□□□ -0.65
SRP54-206ENST00000555317 ENPP6Q6UWR7 440 aa11.02□□□□□ -0.65
SRP54-206ENST00000555317 B3GNT6Q6ZMB0 384 aa11.02□□□□□ -0.65
SRP54-206ENST00000555317 C16orf62Q7Z3J2 963 aa11.02□□□□□ -0.65
SRP54-206ENST00000555317 MARCH3Q86UD3 253 aa11.02□□□□□ -0.65
SRP54-206ENST00000555317 OR10Q1Q8NGQ4 319 aa11.02□□□□□ -0.65
SRP54-206ENST00000555317 ITLN2Q8WWU7 325 aaPredicted RBP11.02□□□□□ -0.65
SRP54-206ENST00000555317 RND1Q92730 232 aa11.02□□□□□ -0.65
SRP54-206ENST00000555317 ABTB1Q969K4 478 aaPredicted RBP11.02□□□□□ -0.65
SRP54-206ENST00000555317 TEX37Q96LM6 180 aa11.02□□□□□ -0.65
SRP54-206ENST00000555317 SFXN2Q96NB2 322 aa11.02□□□□□ -0.65
SRP54-206ENST00000555317 CCDC115Q96NT0 180 aa11.02□□□□□ -0.65
SRP54-206ENST00000555317 OR7D2Q96RA2 312 aa11.02□□□□□ -0.65
SRP54-206ENST00000555317 SLC35A5Q9BS91 424 aa11.02□□□□□ -0.65
SRP54-206ENST00000555317 OR2B2Q9GZK3 357 aa11.02□□□□□ -0.65
SRP54-206ENST00000555317 HOXD1Q9GZZ0 328 aa11.02□□□□□ -0.65
SRP54-206ENST00000555317 DSN1Q9H410 356 aa11.02□□□□□ -0.65
SRP54-206ENST00000555317 RMND5AQ9H871 391 aa11.02□□□□□ -0.65
SRP54-206ENST00000555317 UBQLN4Q9NRR5 601 aa11.02□□□□□ -0.65
SRP54-206ENST00000555317 EXD2Q9NVH0 621 aa11.02□□□□□ -0.65
SRP54-206ENST00000555317 GPATCH2Q9NW75 528 aa11.02□□□□□ -0.65
SRP54-206ENST00000555317 FLRT3Q9NZU0 649 aa11.02□□□□□ -0.65
SRP54-206ENST00000555317 BTNL2Q9UIR0 455 aa11.02□□□□□ -0.65
SRP54-206ENST00000555317 FBXL2Q9UKC9 423 aa11.02□□□□□ -0.65
SRP54-206ENST00000555317 PRSS44E7EML9 344 aa11.01□□□□□ -0.65
SRP54-206ENST00000555317 ZNF195O14628 629 aa11.01□□□□□ -0.65
SRP54-206ENST00000555317 ANP32DO95626 131 aa11.01□□□□□ -0.65
SRP54-206ENST00000555317 OXSR1O95747 527 aaPredicted RBP11.01□□□□□ -0.65
SRP54-206ENST00000555317 ACTL6AO96019 429 aa11.01□□□□□ -0.65
SRP54-206ENST00000555317 NGFRP08138 427 aa11.01□□□□□ -0.65
SRP54-206ENST00000555317 HK1P19367 917 aa11.01□□□□□ -0.65
SRP54-206ENST00000555317 AGAP20933 346 aa11.01□□□□□ -0.65
SRP54-206ENST00000555317 TBXA2RP21731 343 aa11.01□□□□□ -0.65
SRP54-206ENST00000555317 IDH3AP50213 366 aa11.01□□□□□ -0.65
SRP54-206ENST00000555317 GAS1P54826 345 aa11.01□□□□□ -0.65
SRP54-206ENST00000555317 DSCR4P56555 118 aaPredicted RBP11.01□□□□□ -0.65
SRP54-206ENST00000555317 HPCAP84074 193 aa11.01□□□□□ -0.65
SRP54-206ENST00000555317 ADORA2A-AS1P86434 159 aa11.01□□□□□ -0.65
SRP54-206ENST00000555317 C17orf67Q0P5P2 114 aa11.01□□□□□ -0.65
SRP54-206ENST00000555317 PMPCAQ10713 525 aa11.01□□□□□ -0.65
SRP54-206ENST00000555317 FLYWCH1Q4VC44 716 aa11.01□□□□□ -0.65
SRP54-206ENST00000555317 RAET1LQ5VY80 246 aa11.01□□□□□ -0.65
SRP54-206ENST00000555317 ZNF621Q6ZSS3 439 aa11.01□□□□□ -0.65
SRP54-206ENST00000555317 MISPQ8IVT2 679 aa11.01□□□□□ -0.65
SRP54-206ENST00000555317 CLEC4FQ8N1N0 589 aa11.01□□□□□ -0.65
SRP54-206ENST00000555317 ZNF614Q8N883 585 aa11.01□□□□□ -0.65
SRP54-206ENST00000555317 OR5D16Q8NGK9 328 aa11.01□□□□□ -0.65
SRP54-206ENST00000555317 DUSP19Q8WTR2 217 aa11.01□□□□□ -0.65
SRP54-206ENST00000555317 CA5BP1Q8WTZ4 195 aa11.01□□□□□ -0.65
SRP54-206ENST00000555317 RNF138Q8WVD3 245 aa11.01□□□□□ -0.65
SRP54-206ENST00000555317 ASB5Q8WWX0 329 aa11.01□□□□□ -0.65
SRP54-206ENST00000555317 DMRTA2Q96SC8 542 aa11.01□□□□□ -0.65
SRP54-206ENST00000555317 CCDC28BQ9BUN5 200 aa11.01□□□□□ -0.65
SRP54-206ENST00000555317 MED4Q9NPJ6 270 aa11.01□□□□□ -0.65
SRP54-206ENST00000555317 SDR39U1Q9NRG7 319 aaPredicted RBP11.01□□□□□ -0.65
SRP54-206ENST00000555317 ZNF446Q9NWS9 450 aa11.01□□□□□ -0.65
SRP54-206ENST00000555317 MED11Q9P086 117 aa11.01□□□□□ -0.65
SRP54-206ENST00000555317 NAV2Q8IVL1 2488 aa11.01□□□□□ -0.65
SRP54-206ENST00000555317 NOTCH2Q04721 2471 aa11□□□□□ -0.65
SRP54-206ENST00000555317 ARHGAP21Q5T5U3 1957 aa11□□□□□ -0.65
SRP54-206ENST00000555317 CCDC154A6NI56 674 aa11□□□□□ -0.65
SRP54-206ENST00000555317 AHRRA9YTQ3 701 aa11□□□□□ -0.65
SRP54-206ENST00000555317 ALG1L2C9J202 215 aa11□□□□□ -0.65
SRP54-206ENST00000555317 H0Y3Z8 333 aa11□□□□□ -0.65
SRP54-206ENST00000555317 RFXANKO14593 260 aa11□□□□□ -0.65
SRP54-206ENST00000555317 ADAM10O14672 748 aa11□□□□□ -0.65
SRP54-206ENST00000555317 GMFGO60234 142 aa11□□□□□ -0.65
SRP54-206ENST00000555317 CLDN1O95832 211 aa11□□□□□ -0.65
SRP54-206ENST00000555317 BMP7P18075 431 aa11□□□□□ -0.65
SRP54-206ENST00000555317 IL12AP29459 219 aa11□□□□□ -0.65
SRP54-206ENST00000555317 ZNF41P51814 821 aaPredicted RBP11□□□□□ -0.65
SRP54-206ENST00000555317 POLR2JP52435 117 aaKnown RBP11□□□□□ -0.65
SRP54-206ENST00000555317 PHC1P78364 1004 aa11□□□□□ -0.65
SRP54-206ENST00000555317 CRYZQ08257 329 aaKnown RBP11□□□□□ -0.65
SRP54-206ENST00000555317 ART3Q13508 389 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms