RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 FAF1Q9UNN5 650 aaPredicted RBP11.25□□□□□ -0.61
SYNE2-214ENST00000554928 LRRK2Q5S007 2527 aa11.24□□□□□ -0.61
SYNE2-214ENST00000554928 FAM234BA2RU67 622 aa11.24□□□□□ -0.61
SYNE2-214ENST00000554928 WIPF3A6NGB9 483 aa11.24□□□□□ -0.61
SYNE2-214ENST00000554928 NR5A2O00482 541 aa11.24□□□□□ -0.61
SYNE2-214ENST00000554928 CCL21O00585 134 aa11.24□□□□□ -0.61
SYNE2-214ENST00000554928 OR12D1P0DN82 309 aa11.24□□□□□ -0.61
SYNE2-214ENST00000554928 CAPN3P20807 821 aa11.24□□□□□ -0.61
SYNE2-214ENST00000554928 MDH1P40925 334 aaKnown RBP11.24□□□□□ -0.61
SYNE2-214ENST00000554928 GYS2P54840 703 aa11.24□□□□□ -0.61
SYNE2-214ENST00000554928 PSPHP78330 225 aa11.24□□□□□ -0.61
SYNE2-214ENST00000554928 RBPJQ06330 500 aa11.24□□□□□ -0.61
SYNE2-214ENST00000554928 TOMM20Q15388 145 aa11.24□□□□□ -0.61
SYNE2-214ENST00000554928 CDSNQ15517 529 aa11.24□□□□□ -0.61
SYNE2-214ENST00000554928 CD226Q15762 336 aa11.24□□□□□ -0.61
SYNE2-214ENST00000554928 HIST2H2BCQ6DN03 193 aa11.24□□□□□ -0.61
SYNE2-214ENST00000554928 ARHGAP11AQ6P4F7 1023 aa11.24□□□□□ -0.61
SYNE2-214ENST00000554928 ZNF621Q6ZSS3 439 aa11.24□□□□□ -0.61
SYNE2-214ENST00000554928 HMGN2P46Q86SG4 172 aa11.24□□□□□ -0.61
SYNE2-214ENST00000554928 RNF130Q86XS8 419 aa11.24□□□□□ -0.61
SYNE2-214ENST00000554928 ARFGAP2Q8N6H7 521 aa11.24□□□□□ -0.61
SYNE2-214ENST00000554928 FADS6Q8N9I5 356 aa11.24□□□□□ -0.61
SYNE2-214ENST00000554928 GLB1L3Q8NCI6 653 aaPredicted RBP11.24□□□□□ -0.61
SYNE2-214ENST00000554928 OR2M3Q8NG83 312 aa11.24□□□□□ -0.61
SYNE2-214ENST00000554928 NEIL3Q8TAT5 605 aa11.24□□□□□ -0.61
SYNE2-214ENST00000554928 DUSP19Q8WTR2 217 aa11.24□□□□□ -0.61
SYNE2-214ENST00000554928 SSC4DQ8WTU2 575 aa11.24□□□□□ -0.61
SYNE2-214ENST00000554928 ARSGQ96EG1 525 aa11.24□□□□□ -0.61
SYNE2-214ENST00000554928 NEURL3Q96EH8 262 aa11.24□□□□□ -0.61
SYNE2-214ENST00000554928 CCDC120Q96HB5 630 aa11.24□□□□□ -0.61
SYNE2-214ENST00000554928 NPAS1Q99742 590 aa11.24□□□□□ -0.61
SYNE2-214ENST00000554928 TMEM120AQ9BXJ8 343 aa11.24□□□□□ -0.61
SYNE2-214ENST00000554928 LDAHQ9H6V9 325 aa11.24□□□□□ -0.61
SYNE2-214ENST00000554928 EXO5Q9H790 373 aa11.24□□□□□ -0.61
SYNE2-214ENST00000554928 ACKR4Q9NPB9 350 aa11.24□□□□□ -0.61
SYNE2-214ENST00000554928 SLAMF8Q9P0V8 285 aa11.24□□□□□ -0.61
SYNE2-214ENST00000554928 KCNE5Q9UJ90 142 aa11.24□□□□□ -0.61
SYNE2-214ENST00000554928 PCDHGB4Q9UN71 923 aa11.24□□□□□ -0.61
SYNE2-214ENST00000554928 MED12Q93074 2177 aa11.23□□□□□ -0.61
SYNE2-214ENST00000554928 A1L4Q6 167 aa11.23□□□□□ -0.61
SYNE2-214ENST00000554928 SHISA8B8ZZ34 492 aa11.23□□□□□ -0.61
SYNE2-214ENST00000554928 NPIPB9F8W1W9 429 aa11.23□□□□□ -0.61
SYNE2-214ENST00000554928 AQP7O14520 342 aa11.23□□□□□ -0.61
SYNE2-214ENST00000554928 RFXANKO14593 260 aa11.23□□□□□ -0.61
SYNE2-214ENST00000554928 FCMRO60667 390 aa11.23□□□□□ -0.61
SYNE2-214ENST00000554928 ANGPTL1O95841 491 aa11.23□□□□□ -0.61
SYNE2-214ENST00000554928 IL6P05231 212 aa11.23□□□□□ -0.61
SYNE2-214ENST00000554928 VIMP08670 466 aaKnown RBP11.23□□□□□ -0.61
SYNE2-214ENST00000554928 HOXB9P17482 250 aaPredicted RBP11.23□□□□□ -0.61
SYNE2-214ENST00000554928 ELAVL4P26378 380 aaKnown RBP11.23□□□□□ -0.61
SYNE2-214ENST00000554928 CHI3L1P36222 383 aaPredicted RBP11.23□□□□□ -0.61
SYNE2-214ENST00000554928 MVDP53602 400 aa11.23□□□□□ -0.61
SYNE2-214ENST00000554928 CRYZQ08257 329 aaKnown RBP11.23□□□□□ -0.61
SYNE2-214ENST00000554928 NDUFAF6Q330K2 333 aa11.23□□□□□ -0.61
SYNE2-214ENST00000554928 GXYLT1Q4G148 440 aa11.23□□□□□ -0.61
SYNE2-214ENST00000554928 AGKQ53H12 422 aa11.23□□□□□ -0.61
SYNE2-214ENST00000554928 PAGE3Q5JUK9 113 aa11.23□□□□□ -0.61
SYNE2-214ENST00000554928 RTL6Q6ICC9 239 aa11.23□□□□□ -0.61
SYNE2-214ENST00000554928 BLOC1S3Q6QNY0 202 aa11.23□□□□□ -0.61
SYNE2-214ENST00000554928 MSRB3Q8IXL7 192 aa11.23□□□□□ -0.61
SYNE2-214ENST00000554928 CHDHQ8NE62 594 aaPredicted RBP11.23□□□□□ -0.61
SYNE2-214ENST00000554928 VPS37AQ8NEZ2 397 aa11.23□□□□□ -0.61
SYNE2-214ENST00000554928 OR5M1Q8NGP8 315 aa11.23□□□□□ -0.61
SYNE2-214ENST00000554928 MIPOL1Q8TD10 442 aa11.23□□□□□ -0.61
SYNE2-214ENST00000554928 ZFP90Q8TF47 636 aa11.23□□□□□ -0.61
SYNE2-214ENST00000554928 GTF2H4Q92759 462 aa11.23□□□□□ -0.61
SYNE2-214ENST00000554928 ZNF524Q96C55 264 aa11.23□□□□□ -0.61
SYNE2-214ENST00000554928 ZNF317Q96PQ6 595 aaPredicted RBP11.23□□□□□ -0.61
SYNE2-214ENST00000554928 DMRTA2Q96SC8 542 aa11.23□□□□□ -0.61
SYNE2-214ENST00000554928 SDF2Q99470 211 aa11.23□□□□□ -0.61
SYNE2-214ENST00000554928 OR2B2Q9GZK3 357 aa11.23□□□□□ -0.61
SYNE2-214ENST00000554928 PAIP1Q9H074 479 aaKnown RBP11.23□□□□□ -0.61
SYNE2-214ENST00000554928 CCDC134Q9H6E4 229 aa11.23□□□□□ -0.61
SYNE2-214ENST00000554928 QPCTLQ9NXS2 382 aa11.23□□□□□ -0.61
SYNE2-214ENST00000554928 CCDC167Q9P0B6 97 aa11.23□□□□□ -0.61
SYNE2-214ENST00000554928 PPP4R1LQ9P1A2 415 aa11.23□□□□□ -0.61
SYNE2-214ENST00000554928 B4GALT7Q9UBV7 327 aa11.23□□□□□ -0.61
SYNE2-214ENST00000554928 ABCG2Q9UNQ0 655 aa11.23□□□□□ -0.61
SYNE2-214ENST00000554928 MEMO1Q9Y316 297 aa11.23□□□□□ -0.61
SYNE2-214ENST00000554928 DOPEY2Q9Y3R5 2298 aa11.23□□□□□ -0.61
SYNE2-214ENST00000554928 C15orf38-AP3S2A0A0A6YYH1 394 aa11.22□□□□□ -0.61
SYNE2-214ENST00000554928 A0A1B0GUH1 482 aa11.22□□□□□ -0.61
SYNE2-214ENST00000554928 ALG1L2C9J202 215 aa11.22□□□□□ -0.61
SYNE2-214ENST00000554928 HMGN4O00479 90 aa11.22□□□□□ -0.61
SYNE2-214ENST00000554928 PRRG2O14669 202 aa11.22□□□□□ -0.61
SYNE2-214ENST00000554928 SUSD5O60279 629 aa11.22□□□□□ -0.61
SYNE2-214ENST00000554928 ZIC3O60481 467 aa11.22□□□□□ -0.61
SYNE2-214ENST00000554928 HCN1O60741 890 aa11.22□□□□□ -0.61
SYNE2-214ENST00000554928 BCAS1O75363 584 aaPredicted RBP11.22□□□□□ -0.61
SYNE2-214ENST00000554928 CLDN1O95832 211 aa11.22□□□□□ -0.61
SYNE2-214ENST00000554928 BMP7P18075 431 aa11.22□□□□□ -0.61
SYNE2-214ENST00000554928 NCF2P19878 526 aaPredicted RBP11.22□□□□□ -0.61
SYNE2-214ENST00000554928 TBXA2RP21731 343 aa11.22□□□□□ -0.61
SYNE2-214ENST00000554928 DCTP40126 519 aa11.22□□□□□ -0.61
SYNE2-214ENST00000554928 STARP49675 285 aa11.22□□□□□ -0.61
SYNE2-214ENST00000554928 ATP4BP51164 291 aa11.22□□□□□ -0.61
SYNE2-214ENST00000554928 PSMD4P55036 377 aaKnown RBP11.22□□□□□ -0.61
SYNE2-214ENST00000554928 B3GALT5-AS1P59052 145 aa11.22□□□□□ -0.61
SYNE2-214ENST00000554928 STX1BP61266 288 aa11.22□□□□□ -0.61
SYNE2-214ENST00000554928 RCAN2Q14206 197 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms