RNA–Protein interactions for RNA: ENST00000554811.5

XRCC3-208, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 2

Gene XRCC3, Length 3,668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-208ENST00000554811 FANK1Q8TC84 345 aa11.11□□□□□ -0.63
XRCC3-208ENST00000554811 EFHD2Q96C19 240 aaPredicted RBP11.11□□□□□ -0.63
XRCC3-208ENST00000554811 MED28Q9H204 178 aa11.11□□□□□ -0.63
XRCC3-208ENST00000554811 SRMSQ9H3Y6 488 aa11.11□□□□□ -0.63
XRCC3-208ENST00000554811 INSL6Q9Y581 213 aa11.11□□□□□ -0.63
XRCC3-208ENST00000554811 A0A1W2PQ72 361 aa11.1□□□□□ -0.63
XRCC3-208ENST00000554811 VEGFDO43915 354 aa11.1□□□□□ -0.63
XRCC3-208ENST00000554811 ACP2P11117 423 aa11.1□□□□□ -0.63
XRCC3-208ENST00000554811 TYRP1P17643 537 aa11.1□□□□□ -0.63
XRCC3-208ENST00000554811 PRDX1Q06830 199 aaKnown RBP11.1□□□□□ -0.63
XRCC3-208ENST00000554811 ZNF770Q6IQ21 691 aaPredicted RBP11.1□□□□□ -0.63
XRCC3-208ENST00000554811 OR8H3Q8N146 312 aa11.1□□□□□ -0.63
XRCC3-208ENST00000554811 ARL14Q8N4G2 192 aa11.1□□□□□ -0.63
XRCC3-208ENST00000554811 OR13C2Q8NGS9 318 aa11.1□□□□□ -0.63
XRCC3-208ENST00000554811 OR8K3Q8NH51 312 aa11.1□□□□□ -0.63
XRCC3-208ENST00000554811 GRPEL2Q8TAA5 225 aa11.1□□□□□ -0.63
XRCC3-208ENST00000554811 CHAC2Q8WUX2 184 aa11.1□□□□□ -0.63
XRCC3-208ENST00000554811 ST6GAL2Q96JF0 529 aa11.1□□□□□ -0.63
XRCC3-208ENST00000554811 HHIPQ96QV1 700 aa11.1□□□□□ -0.63
XRCC3-208ENST00000554811 HINT3Q9NQE9 182 aaKnown RBP11.1□□□□□ -0.63
XRCC3-208ENST00000554811 FBXL4Q9UKA2 621 aa11.1□□□□□ -0.63
XRCC3-208ENST00000554811 RASD1Q9Y272 281 aa11.1□□□□□ -0.63
XRCC3-208ENST00000554811 TDRD6O60522 2096 aaKnown RBP11.1□□□□□ -0.63
XRCC3-208ENST00000554811 NPIPB8E9PQR5 432 aa11.1□□□□□ -0.63
XRCC3-208ENST00000554811 OR10H2O60403 315 aa11.1□□□□□ -0.63
XRCC3-208ENST00000554811 OR2B3O76000 313 aa11.1□□□□□ -0.63
XRCC3-208ENST00000554811 MSL3P1P0C860 447 aa11.1□□□□□ -0.63
XRCC3-208ENST00000554811 SSTR2P30874 369 aa11.1□□□□□ -0.63
XRCC3-208ENST00000554811 SNRPGP62308 76 aaKnown RBP11.1□□□□□ -0.63
XRCC3-208ENST00000554811 FLYWCH1Q4VC44 716 aa11.1□□□□□ -0.63
XRCC3-208ENST00000554811 TP53I3Q53FA7 332 aa11.1□□□□□ -0.63
XRCC3-208ENST00000554811 XKRXQ6PP77 449 aa11.1□□□□□ -0.63
XRCC3-208ENST00000554811 TMEM99Q8N816 258 aa11.1□□□□□ -0.63
XRCC3-208ENST00000554811 OR2T33Q8NG76 320 aa11.1□□□□□ -0.63
XRCC3-208ENST00000554811 GNPDA2Q8TDQ7 276 aa11.1□□□□□ -0.63
XRCC3-208ENST00000554811 ZMYND19Q96E35 227 aaPredicted RBP11.1□□□□□ -0.63
XRCC3-208ENST00000554811 METTL2AQ96IZ6 378 aaKnown RBP11.1□□□□□ -0.63
XRCC3-208ENST00000554811 POLDIP3Q9BY77 421 aaKnown RBP11.1□□□□□ -0.63
XRCC3-208ENST00000554811 BRD7Q9NPI1 651 aa11.1□□□□□ -0.63
XRCC3-208ENST00000554811 DIMT1Q9UNQ2 313 aaKnown RBP11.1□□□□□ -0.63
XRCC3-208ENST00000554811 COL4A6Q14031 1691 aa11.1□□□□□ -0.63
XRCC3-208ENST00000554811 TRIOO75962 3097 aa11.1□□□□□ -0.63
XRCC3-208ENST00000554811 CENPVL1A0A0U1RR11 272 aa11.1□□□□□ -0.63
XRCC3-208ENST00000554811 PROM1O43490 865 aa11.1□□□□□ -0.63
XRCC3-208ENST00000554811 ORC5O43913 435 aa11.1□□□□□ -0.63
XRCC3-208ENST00000554811 KAT7O95251 611 aa11.1□□□□□ -0.63
XRCC3-208ENST00000554811 PCSK2P16519 638 aa11.1□□□□□ -0.63
XRCC3-208ENST00000554811 CMPK1P30085 196 aa11.1□□□□□ -0.63
XRCC3-208ENST00000554811 EPHA5P54756 1037 aa11.1□□□□□ -0.63
XRCC3-208ENST00000554811 ZNF155Q12901 538 aaPredicted RBP11.1□□□□□ -0.63
XRCC3-208ENST00000554811 GPR50Q13585 617 aa11.1□□□□□ -0.63
XRCC3-208ENST00000554811 GNA13Q14344 377 aa11.1□□□□□ -0.63
XRCC3-208ENST00000554811 FAM205BPQ63HN1 556 aa11.1□□□□□ -0.63
XRCC3-208ENST00000554811 FAAH2Q6GMR7 532 aa11.1□□□□□ -0.63
XRCC3-208ENST00000554811 UBE3DQ7Z6J8 389 aa11.1□□□□□ -0.63
XRCC3-208ENST00000554811 OR4Q3Q8NH05 313 aa11.1□□□□□ -0.63
XRCC3-208ENST00000554811 DEDD2Q8WXF8 326 aa11.1□□□□□ -0.63
XRCC3-208ENST00000554811 BADQ92934 168 aa11.1□□□□□ -0.63
XRCC3-208ENST00000554811 PTCHD1Q96NR3 888 aa11.1□□□□□ -0.63
XRCC3-208ENST00000554811 ALG8Q9BVK2 526 aa11.1□□□□□ -0.63
XRCC3-208ENST00000554811 PLEKHB1Q9UF11 243 aaPredicted RBP11.1□□□□□ -0.63
XRCC3-208ENST00000554811 HELZP42694 1942 aaKnown RBP11.09□□□□□ -0.63
XRCC3-208ENST00000554811 TCF20Q9UGU0 1960 aaKnown RBP11.09□□□□□ -0.63
XRCC3-208ENST00000554811 ANKRD61A6NGH8 418 aa11.09□□□□□ -0.63
XRCC3-208ENST00000554811 C4orf51C9J302 202 aa11.09□□□□□ -0.63
XRCC3-208ENST00000554811 PEX12O00623 359 aa11.09□□□□□ -0.63
XRCC3-208ENST00000554811 TBX6O95947 436 aaPredicted RBP11.09□□□□□ -0.63
XRCC3-208ENST00000554811 GSTM3P21266 225 aa11.09□□□□□ -0.63
XRCC3-208ENST00000554811 ATP5A1P25705 553 aaKnown RBP11.09□□□□□ -0.63
XRCC3-208ENST00000554811 PSMB10P40306 273 aa11.09□□□□□ -0.63
XRCC3-208ENST00000554811 PGDP52209 483 aa11.09□□□□□ -0.63
XRCC3-208ENST00000554811 HMGA2P52926 109 aa11.09□□□□□ -0.63
XRCC3-208ENST00000554811 PDGFRLQ15198 375 aa11.09□□□□□ -0.63
XRCC3-208ENST00000554811 PLK5Q496M5 336 aa11.09□□□□□ -0.63
XRCC3-208ENST00000554811 TRMT12Q53H54 448 aaKnown RBP11.09□□□□□ -0.63
XRCC3-208ENST00000554811 OR4K13Q8NH42 304 aa11.09□□□□□ -0.63
XRCC3-208ENST00000554811 PATE1Q8WXA2 126 aa11.09□□□□□ -0.63
XRCC3-208ENST00000554811 FGF13Q92913 245 aa11.09□□□□□ -0.63
XRCC3-208ENST00000554811 LRIG1Q96JA1 1093 aa11.09□□□□□ -0.63
XRCC3-208ENST00000554811 CCDC86Q9H6F5 360 aaKnown RBP11.09□□□□□ -0.63
XRCC3-208ENST00000554811 SLC25A19Q9HC21 320 aa11.09□□□□□ -0.63
XRCC3-208ENST00000554811 LHX9Q9NQ69 397 aa11.09□□□□□ -0.63
XRCC3-208ENST00000554811 PRSS16Q9NQE7 514 aa11.09□□□□□ -0.63
XRCC3-208ENST00000554811 FKBP14Q9NWM8 211 aa11.09□□□□□ -0.63
XRCC3-208ENST00000554811 ADAM30Q9UKF2 790 aa11.09□□□□□ -0.63
XRCC3-208ENST00000554811 TBX21Q9UL17 535 aa11.09□□□□□ -0.63
XRCC3-208ENST00000554811 FAM172BPA6NC97 362 aa11.09□□□□□ -0.63
XRCC3-208ENST00000554811 LRRN3E7EW58 273 aa11.09□□□□□ -0.63
XRCC3-208ENST00000554811 SPINT1O43278 529 aa11.09□□□□□ -0.63
XRCC3-208ENST00000554811 EMC8O43402 210 aa11.09□□□□□ -0.63
XRCC3-208ENST00000554811 PPP1R3DO95685 299 aa11.09□□□□□ -0.63
XRCC3-208ENST00000554811 LIMS3P0CW19 117 aa11.09□□□□□ -0.63
XRCC3-208ENST00000554811 LIMS4P0CW20 117 aa11.09□□□□□ -0.63
XRCC3-208ENST00000554811 NDUFV2P19404 249 aa11.09□□□□□ -0.63
XRCC3-208ENST00000554811 GDI1P31150 447 aa11.09□□□□□ -0.63
XRCC3-208ENST00000554811 RPL6Q02878 288 aaKnown RBP11.09□□□□□ -0.63
XRCC3-208ENST00000554811 RGS1Q08116 209 aa11.09□□□□□ -0.63
XRCC3-208ENST00000554811 LINC00299Q6ZSB3 139 aa11.09□□□□□ -0.63
XRCC3-208ENST00000554811 AMIGO1Q86WK6 493 aa11.09□□□□□ -0.63
XRCC3-208ENST00000554811 LRRC17Q8N6Y2 441 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms