RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 MYH15Q9Y2K3 1946 aa13.18□□□□□ -0.3
VTI1B-204ENST00000554659 PHLPP1O60346 1717 aa13.18□□□□□ -0.3
VTI1B-204ENST00000554659 TRAV18A0A075B6X5 111 aa13.18□□□□□ -0.3
VTI1B-204ENST00000554659 MEIOCA2RUB1 952 aa13.18□□□□□ -0.3
VTI1B-204ENST00000554659 GABRR3A8MPY1 467 aa13.18□□□□□ -0.3
VTI1B-204ENST00000554659 BRINP1O60477 761 aa13.18□□□□□ -0.3
VTI1B-204ENST00000554659 IFNA17P01571 189 aa13.18□□□□□ -0.3
VTI1B-204ENST00000554659 SHC2P98077 582 aa13.18□□□□□ -0.3
VTI1B-204ENST00000554659 CYCSP99999 105 aaKnown RBP13.18□□□□□ -0.3
VTI1B-204ENST00000554659 WDR45BQ5MNZ6 344 aa13.18□□□□□ -0.3
VTI1B-204ENST00000554659 ARL11Q969Q4 196 aa13.18□□□□□ -0.3
VTI1B-204ENST00000554659 THAP7Q9BT49 309 aaPredicted RBP13.18□□□□□ -0.3
VTI1B-204ENST00000554659 FN3KQ9H479 309 aa13.18□□□□□ -0.3
VTI1B-204ENST00000554659 CSNK1G1Q9HCP0 422 aa13.18□□□□□ -0.3
VTI1B-204ENST00000554659 C5AR2Q9P296 337 aa13.18□□□□□ -0.3
VTI1B-204ENST00000554659 C7orf72A4D263 438 aa13.17□□□□□ -0.3
VTI1B-204ENST00000554659 PRAMEF2O60811 474 aa13.17□□□□□ -0.3
VTI1B-204ENST00000554659 CSF1P09603 554 aa13.17□□□□□ -0.3
VTI1B-204ENST00000554659 NUDT7P0C024 238 aa13.17□□□□□ -0.3
VTI1B-204ENST00000554659 ADRA1AP35348 466 aa13.17□□□□□ -0.3
VTI1B-204ENST00000554659 POU3F4P49335 361 aa13.17□□□□□ -0.3
VTI1B-204ENST00000554659 CTXN1P60606 82 aa13.17□□□□□ -0.3
VTI1B-204ENST00000554659 PPA1Q15181 289 aa13.17□□□□□ -0.3
VTI1B-204ENST00000554659 CST6Q15828 149 aa13.17□□□□□ -0.3
VTI1B-204ENST00000554659 PCGF3Q3KNV8 242 aa13.17□□□□□ -0.3
VTI1B-204ENST00000554659 FIGLAQ6QHK4 219 aa13.17□□□□□ -0.3
VTI1B-204ENST00000554659 SLC7A5P1Q8MH63 180 aa13.17□□□□□ -0.3
VTI1B-204ENST00000554659 SPRYD4Q8WW59 207 aaPredicted RBP13.17□□□□□ -0.3
VTI1B-204ENST00000554659 CCDC88AQ3V6T2 1871 aa13.17□□□□□ -0.3
VTI1B-204ENST00000554659 DNAJC25-GNG10A0A024R161 153 aa13.17□□□□□ -0.3
VTI1B-204ENST00000554659 F5H5P2 479 aa13.17□□□□□ -0.3
VTI1B-204ENST00000554659 IL1AP01583 271 aa13.17□□□□□ -0.3
VTI1B-204ENST00000554659 EDN1P05305 212 aa13.17□□□□□ -0.3
VTI1B-204ENST00000554659 GALK2Q01415 458 aa13.17□□□□□ -0.3
VTI1B-204ENST00000554659 MLLT11Q13015 90 aaPredicted RBP13.17□□□□□ -0.3
VTI1B-204ENST00000554659 DYRK1AQ13627 763 aa13.17□□□□□ -0.3
VTI1B-204ENST00000554659 GK2Q14410 553 aaPredicted RBP13.17□□□□□ -0.3
VTI1B-204ENST00000554659 FAM205BPQ63HN1 556 aa13.17□□□□□ -0.3
VTI1B-204ENST00000554659 ZNF619Q8N2I2 560 aa13.17□□□□□ -0.3
VTI1B-204ENST00000554659 PARP16Q8N5Y8 322 aa13.17□□□□□ -0.3
VTI1B-204ENST00000554659 CREB3L4Q8TEY5 395 aa13.17□□□□□ -0.3
VTI1B-204ENST00000554659 NEIL2Q969S2 332 aa13.17□□□□□ -0.3
VTI1B-204ENST00000554659 CNTNAP3BQ96NU0 1288 aa13.17□□□□□ -0.3
VTI1B-204ENST00000554659 OR51J1Q9H342 316 aa13.17□□□□□ -0.3
VTI1B-204ENST00000554659 ZNF442Q9H7R0 627 aa13.17□□□□□ -0.3
VTI1B-204ENST00000554659 NT5DC2Q9H857 520 aa13.17□□□□□ -0.3
VTI1B-204ENST00000554659 NPC1O15118 1278 aa13.17□□□□□ -0.3
VTI1B-204ENST00000554659 IFNGR1P15260 489 aa13.17□□□□□ -0.3
VTI1B-204ENST00000554659 UGT2B7P16662 529 aa13.17□□□□□ -0.3
VTI1B-204ENST00000554659 HOXD12P35452 270 aa13.17□□□□□ -0.3
VTI1B-204ENST00000554659 ZNF674Q2M3X9 581 aa13.17□□□□□ -0.3
VTI1B-204ENST00000554659 ZNF534Q76KX8 674 aa13.17□□□□□ -0.3
VTI1B-204ENST00000554659 TTC9BQ8N6N2 239 aa13.17□□□□□ -0.3
VTI1B-204ENST00000554659 LDAHQ9H6V9 325 aa13.17□□□□□ -0.3
VTI1B-204ENST00000554659 FANCFQ9NPI8 374 aa13.17□□□□□ -0.3
VTI1B-204ENST00000554659 ZFP57Q9NU63 452 aa13.17□□□□□ -0.3
VTI1B-204ENST00000554659 CYP8B1Q9UNU6 501 aa13.17□□□□□ -0.3
VTI1B-204ENST00000554659 ARSJQ5FYB0 599 aaPredicted RBP13.17□□□□□ -0.3
VTI1B-204ENST00000554659 TMEM102Q8N9M5 508 aaPredicted RBP13.17□□□□□ -0.3
VTI1B-204ENST00000554659 ACVR1CQ8NER5 493 aa13.17□□□□□ -0.3
VTI1B-204ENST00000554659 ZNF417Q8TAU3 575 aa13.17□□□□□ -0.3
VTI1B-204ENST00000554659 ANTXRLA6NF34 631 aa13.17□□□□□ -0.3
VTI1B-204ENST00000554659 ACOT7O00154 380 aa13.17□□□□□ -0.3
VTI1B-204ENST00000554659 SLC34A2O95436 690 aa13.17□□□□□ -0.3
VTI1B-204ENST00000554659 CNOT4O95628 575 aaKnown RBP13.17□□□□□ -0.3
VTI1B-204ENST00000554659 SYPP08247 313 aa13.17□□□□□ -0.3
VTI1B-204ENST00000554659 AKR1C2P52895 323 aa13.17□□□□□ -0.3
VTI1B-204ENST00000554659 SNU13P55769 128 aaKnown RBP13.17□□□□□ -0.3
VTI1B-204ENST00000554659 NKX6-1P78426 367 aaPredicted RBP13.17□□□□□ -0.3
VTI1B-204ENST00000554659 TMEM25Q86YD3 366 aa13.17□□□□□ -0.3
VTI1B-204ENST00000554659 ARRDC2Q8TBH0 407 aa13.17□□□□□ -0.3
VTI1B-204ENST00000554659 TMEM239Q8WW34 195 aa13.17□□□□□ -0.3
VTI1B-204ENST00000554659 GGHQ92820 318 aa13.17□□□□□ -0.3
VTI1B-204ENST00000554659 ISG20Q96AZ6 181 aaKnown RBP13.17□□□□□ -0.3
VTI1B-204ENST00000554659 SFXN1Q9H9B4 322 aa13.17□□□□□ -0.3
VTI1B-204ENST00000554659 VSTM2BA6NLU5 285 aa13.16□□□□□ -0.3
VTI1B-204ENST00000554659 UBFD1O14562 309 aaKnown RBP13.16□□□□□ -0.3
VTI1B-204ENST00000554659 CDK2P24941 298 aa13.16□□□□□ -0.3
VTI1B-204ENST00000554659 PBX2P40425 430 aa13.16□□□□□ -0.3
VTI1B-204ENST00000554659 PKDCCQ504Y2 493 aa13.16□□□□□ -0.3
VTI1B-204ENST00000554659 FRMPD2BQ6IN97 320 aa13.16□□□□□ -0.3
VTI1B-204ENST00000554659 PDZD3Q86UT5 571 aa13.16□□□□□ -0.3
VTI1B-204ENST00000554659 OR5AR1Q8NGP9 310 aa13.16□□□□□ -0.3
VTI1B-204ENST00000554659 UBXN10Q96LJ8 280 aa13.16□□□□□ -0.3
VTI1B-204ENST00000554659 SAP130Q9H0E3 1048 aa13.16□□□□□ -0.3
VTI1B-204ENST00000554659 PLEKHA3Q9HB20 300 aa13.16□□□□□ -0.3
VTI1B-204ENST00000554659 INPP5EQ9NRR6 644 aa13.16□□□□□ -0.3
VTI1B-204ENST00000554659 ATXN7L1Q9ULK2 861 aaPredicted RBP13.16□□□□□ -0.3
VTI1B-204ENST00000554659 CSNK1G3Q9Y6M4 447 aa13.16□□□□□ -0.3
VTI1B-204ENST00000554659 AGPAT2O15120 278 aa13.16□□□□□ -0.3
VTI1B-204ENST00000554659 SLC22A5O76082 557 aa13.16□□□□□ -0.3
VTI1B-204ENST00000554659 HNRNPKP61978 463 aaKnown RBP eCLIP13.16□□□□□ -0.3
VTI1B-204ENST00000554659 TRA2BP62995 288 aaKnown RBP13.16□□□□□ -0.3
VTI1B-204ENST00000554659 TP53I3Q53FA7 332 aa13.16□□□□□ -0.3
VTI1B-204ENST00000554659 CARD17Q5XLA6 110 aa13.16□□□□□ -0.3
VTI1B-204ENST00000554659 FAM180BQ6P0A1 224 aa13.16□□□□□ -0.3
VTI1B-204ENST00000554659 OR5H2Q8NGV7 314 aa13.16□□□□□ -0.3
VTI1B-204ENST00000554659 CHPT1Q8WUD6 406 aa13.16□□□□□ -0.3
VTI1B-204ENST00000554659 FRZBQ92765 325 aa13.16□□□□□ -0.3
VTI1B-204ENST00000554659 HINT2Q9BX68 163 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms