RNA–Protein interactions for RNA: ENST00000554604.5

SHMT2-214, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-214ENST00000554604 GOT1L1Q8NHS2 421 aaPredicted RBP11.46□□□□□ -0.57
SHMT2-214ENST00000554604 CDC26Q8NHZ8 85 aa11.46□□□□□ -0.57
SHMT2-214ENST00000554604 C16orf78Q8WTQ4 265 aa11.46□□□□□ -0.57
SHMT2-214ENST00000554604 FIG4Q92562 907 aa11.46□□□□□ -0.57
SHMT2-214ENST00000554604 RIT1Q92963 219 aa11.46□□□□□ -0.57
SHMT2-214ENST00000554604 UCN3Q969E3 161 aa11.46□□□□□ -0.57
SHMT2-214ENST00000554604 FAM162AQ96A26 154 aa11.46□□□□□ -0.57
SHMT2-214ENST00000554604 AURKBQ96GD4 344 aaPredicted RBP11.46□□□□□ -0.57
SHMT2-214ENST00000554604 FBXL20Q96IG2 436 aa11.46□□□□□ -0.57
SHMT2-214ENST00000554604 RNF145Q96MT1 663 aa11.46□□□□□ -0.57
SHMT2-214ENST00000554604 SLC29A1Q99808 456 aa11.46□□□□□ -0.57
SHMT2-214ENST00000554604 BDH2Q9BUT1 245 aa11.46□□□□□ -0.57
SHMT2-214ENST00000554604 CHID1Q9BWS9 393 aa11.46□□□□□ -0.57
SHMT2-214ENST00000554604 DCAF13Q9NV06 445 aaKnown RBP11.46□□□□□ -0.57
SHMT2-214ENST00000554604 ATAD3AQ9NVI7 634 aa11.46□□□□□ -0.57
SHMT2-214ENST00000554604 ZNF639Q9UID6 485 aa11.46□□□□□ -0.57
SHMT2-214ENST00000554604 TINAGQ9UJW2 476 aa11.46□□□□□ -0.57
SHMT2-214ENST00000554604 ADAM29Q9UKF5 820 aa11.46□□□□□ -0.57
SHMT2-214ENST00000554604 EXO1Q9UQ84 846 aaKnown RBP11.46□□□□□ -0.57
SHMT2-214ENST00000554604 ERVK-19Q9WJR5 959 aa11.46□□□□□ -0.57
SHMT2-214ENST00000554604 NCOA6Q14686 2063 aaPredicted RBP11.46□□□□□ -0.57
SHMT2-214ENST00000554604 CREBBPQ92793 2442 aa11.45□□□□□ -0.58
SHMT2-214ENST00000554604 C1orf226A1L170 272 aa11.45□□□□□ -0.58
SHMT2-214ENST00000554604 C7orf72A4D263 438 aa11.45□□□□□ -0.58
SHMT2-214ENST00000554604 SAC3D1A6NKF1 404 aa11.45□□□□□ -0.58
SHMT2-214ENST00000554604 SOCS2O14508 198 aa11.45□□□□□ -0.58
SHMT2-214ENST00000554604 PGRMC2O15173 223 aa11.45□□□□□ -0.58
SHMT2-214ENST00000554604 ACOX3O15254 700 aa11.45□□□□□ -0.58
SHMT2-214ENST00000554604 HS6ST1O60243 411 aa11.45□□□□□ -0.58
SHMT2-214ENST00000554604 TPST1O60507 370 aa11.45□□□□□ -0.58
SHMT2-214ENST00000554604 CDC40O60508 579 aaKnown RBP eCLIP11.45□□□□□ -0.58
SHMT2-214ENST00000554604 TBX19O60806 448 aa11.45□□□□□ -0.58
SHMT2-214ENST00000554604 DEAF1O75398 565 aaPredicted RBP11.45□□□□□ -0.58
SHMT2-214ENST00000554604 CPSF4O95639 269 aaKnown RBP11.45□□□□□ -0.58
SHMT2-214ENST00000554604 IGKV3-11P04433 115 aa11.45□□□□□ -0.58
SHMT2-214ENST00000554604 ABCB1P08183 1280 aaPredicted RBP11.45□□□□□ -0.58
SHMT2-214ENST00000554604 MAPK12P53778 367 aa11.45□□□□□ -0.58
SHMT2-214ENST00000554604 PLGLB1Q02325 96 aa11.45□□□□□ -0.58
SHMT2-214ENST00000554604 C3AR1Q16581 482 aa11.45□□□□□ -0.58
SHMT2-214ENST00000554604 NRF1Q16656 503 aa11.45□□□□□ -0.58
SHMT2-214ENST00000554604 MPEG1Q2M385 716 aa11.45□□□□□ -0.58
SHMT2-214ENST00000554604 ZNF750Q32MQ0 723 aa11.45□□□□□ -0.58
SHMT2-214ENST00000554604 RTL4Q6ZR62 310 aa11.45□□□□□ -0.58
SHMT2-214ENST00000554604 ZNF621Q6ZSS3 439 aa11.45□□□□□ -0.58
SHMT2-214ENST00000554604 SLC29A4Q7RTT9 530 aa11.45□□□□□ -0.58
SHMT2-214ENST00000554604 CHERPQ8IWX8 916 aaKnown RBP11.45□□□□□ -0.58
SHMT2-214ENST00000554604 CLECL1Q8IZS7 167 aa11.45□□□□□ -0.58
SHMT2-214ENST00000554604 EID3Q8N140 333 aa11.45□□□□□ -0.58
SHMT2-214ENST00000554604 NUBPLQ8TB37 319 aa11.45□□□□□ -0.58
SHMT2-214ENST00000554604 SLC22A8Q8TCC7 542 aa11.45□□□□□ -0.58
SHMT2-214ENST00000554604 CCDC120Q96HB5 630 aa11.45□□□□□ -0.58
SHMT2-214ENST00000554604 SGCZQ96LD1 299 aa11.45□□□□□ -0.58
SHMT2-214ENST00000554604 GAL3ST4Q96RP7 486 aa11.45□□□□□ -0.58
SHMT2-214ENST00000554604 SEPHS2Q99611 448 aa11.45□□□□□ -0.58
SHMT2-214ENST00000554604 TEX10Q9NXF1 929 aaPredicted RBP11.45□□□□□ -0.58
SHMT2-214ENST00000554604 NUP214P35658 2090 aaPredicted RBP11.44□□□□□ -0.58
SHMT2-214ENST00000554604 ACOT7O00154 380 aa11.44□□□□□ -0.58
SHMT2-214ENST00000554604 HRKO00198 91 aa11.44□□□□□ -0.58
SHMT2-214ENST00000554604 PRRG2O14669 202 aa11.44□□□□□ -0.58
SHMT2-214ENST00000554604 CLOCKO15516 846 aa11.44□□□□□ -0.58
SHMT2-214ENST00000554604 P04436 131 aa11.44□□□□□ -0.58
SHMT2-214ENST00000554604 SLC35E2P0CK97 266 aa11.44□□□□□ -0.58
SHMT2-214ENST00000554604 DDX5P17844 614 aaKnown RBP11.44□□□□□ -0.58
SHMT2-214ENST00000554604 PTGER1P34995 402 aa11.44□□□□□ -0.58
SHMT2-214ENST00000554604 HSF1Q00613 529 aa11.44□□□□□ -0.58
SHMT2-214ENST00000554604 C2orf80Q0P641 193 aa11.44□□□□□ -0.58
SHMT2-214ENST00000554604 VEZF1Q14119 521 aa11.44□□□□□ -0.58
SHMT2-214ENST00000554604 VMACQ2NL98 169 aa11.44□□□□□ -0.58
SHMT2-214ENST00000554604 NHSL2Q5HYW2 709 aa11.44□□□□□ -0.58
SHMT2-214ENST00000554604 C6orf52Q5T4I8 152 aa11.44□□□□□ -0.58
SHMT2-214ENST00000554604 NDUFAF5Q5TEU4 345 aa11.44□□□□□ -0.58
SHMT2-214ENST00000554604 ANKRD26P1Q6NSI1 321 aa11.44□□□□□ -0.58
SHMT2-214ENST00000554604 RPTNQ6XPR3 784 aa11.44□□□□□ -0.58
SHMT2-214ENST00000554604 DGAT2L6Q6ZPD8 337 aa11.44□□□□□ -0.58
SHMT2-214ENST00000554604 ZNF551Q7Z340 670 aaPredicted RBP11.44□□□□□ -0.58
SHMT2-214ENST00000554604 C9orf40Q8IXQ3 194 aa11.44□□□□□ -0.58
SHMT2-214ENST00000554604 ZZZ3Q8IYH5 903 aa11.44□□□□□ -0.58
SHMT2-214ENST00000554604 C10orf111Q8N326 155 aa11.44□□□□□ -0.58
SHMT2-214ENST00000554604 CBR4Q8N4T8 237 aa11.44□□□□□ -0.58
SHMT2-214ENST00000554604 NATD1Q8N6N6 113 aa11.44□□□□□ -0.58
SHMT2-214ENST00000554604 ZFP62Q8NB50 900 aaPredicted RBP11.44□□□□□ -0.58
SHMT2-214ENST00000554604 OR4K14Q8NGD5 310 aa11.44□□□□□ -0.58
SHMT2-214ENST00000554604 C16orf52Q8NHV5 167 aa11.44□□□□□ -0.58
SHMT2-214ENST00000554604 ZFP90Q8TF47 636 aa11.44□□□□□ -0.58
SHMT2-214ENST00000554604 PPCDCQ96CD2 204 aa11.44□□□□□ -0.58
SHMT2-214ENST00000554604 SLC47A1Q96FL8 570 aa11.44□□□□□ -0.58
SHMT2-214ENST00000554604 ZNF764Q96H86 408 aaPredicted RBP11.44□□□□□ -0.58
SHMT2-214ENST00000554604 TPT1P8Q9HAU6 139 aa11.44□□□□□ -0.58
SHMT2-214ENST00000554604 SACM1LQ9NTJ5 587 aa11.44□□□□□ -0.58
SHMT2-214ENST00000554604 SH3BP4Q9P0V3 963 aa11.44□□□□□ -0.58
SHMT2-214ENST00000554604 SAMD4AQ9UPU9 718 aaKnown RBP11.44□□□□□ -0.58
SHMT2-214ENST00000554604 ZNF835Q9Y2P0 537 aa11.44□□□□□ -0.58
SHMT2-214ENST00000554604 EXPH5Q8NEV8 1989 aa11.44□□□□□ -0.58
SHMT2-214ENST00000554604 ABCA12Q86UK0 2595 aa11.44□□□□□ -0.58
SHMT2-214ENST00000554604 PHF3Q92576 2039 aaKnown RBP11.43□□□□□ -0.58
SHMT2-214ENST00000554604 DPPA5A6NC42 116 aa11.43□□□□□ -0.58
SHMT2-214ENST00000554604 OR6C76A6NM76 312 aa11.43□□□□□ -0.58
SHMT2-214ENST00000554604 PRSS44E7EML9 344 aa11.43□□□□□ -0.58
SHMT2-214ENST00000554604 G3V3Y1 287 aa11.43□□□□□ -0.58
SHMT2-214ENST00000554604 ZNHIT1O43257 154 aa11.43□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms