RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 CCNJQ5T5M9 372 aa9.69□□□□□ -0.86
SHMT2-213ENST00000554600 RAET1LQ5VY80 246 aa9.69□□□□□ -0.86
SHMT2-213ENST00000554600 ZCCHC12Q6PEW1 402 aa9.69□□□□□ -0.86
SHMT2-213ENST00000554600 MEX3BQ6ZN04 569 aaKnown RBP9.69□□□□□ -0.86
SHMT2-213ENST00000554600 ANKRD46Q86W74 232 aa9.69□□□□□ -0.86
SHMT2-213ENST00000554600 MCEMP1Q8IX19 187 aa9.69□□□□□ -0.86
SHMT2-213ENST00000554600 CLECL1Q8IZS7 167 aa9.69□□□□□ -0.86
SHMT2-213ENST00000554600 GATSQ8NAP1 163 aa9.69□□□□□ -0.86
SHMT2-213ENST00000554600 OR4A15Q8NGL6 344 aa9.69□□□□□ -0.86
SHMT2-213ENST00000554600 RAB3IL1Q8TBN0 382 aa9.69□□□□□ -0.86
SHMT2-213ENST00000554600 SFXN5Q8TD22 340 aa9.69□□□□□ -0.86
SHMT2-213ENST00000554600 CDS1Q92903 461 aa9.69□□□□□ -0.86
SHMT2-213ENST00000554600 MOAP1Q96BY2 351 aa9.69□□□□□ -0.86
SHMT2-213ENST00000554600 NTNG2Q96CW9 530 aa9.69□□□□□ -0.86
SHMT2-213ENST00000554600 BTBD2Q9BX70 525 aa9.69□□□□□ -0.86
SHMT2-213ENST00000554600 ACTRT3Q9BYD9 372 aa9.69□□□□□ -0.86
SHMT2-213ENST00000554600 PRDM14Q9GZV8 571 aa9.69□□□□□ -0.86
SHMT2-213ENST00000554600 MEAF6Q9HAF1 191 aa9.69□□□□□ -0.86
SHMT2-213ENST00000554600 NTMQ9P121 344 aa9.69□□□□□ -0.86
SHMT2-213ENST00000554600 Q9UFV3 132 aa9.69□□□□□ -0.86
SHMT2-213ENST00000554600 HAO1Q9UJM8 370 aa9.69□□□□□ -0.86
SHMT2-213ENST00000554600 PCDHGB3Q9Y5G1 929 aa9.69□□□□□ -0.86
SHMT2-213ENST00000554600 POLQO75417 2590 aa9.69□□□□□ -0.86
SHMT2-213ENST00000554600 LRBAP50851 2863 aa9.68□□□□□ -0.86
SHMT2-213ENST00000554600 RNF103-CHMP3A0A140T963 221 aa9.68□□□□□ -0.86
SHMT2-213ENST00000554600 HSPB2A8KAH6 182 aa9.68□□□□□ -0.86
SHMT2-213ENST00000554600 SDHDO14521 159 aa9.68□□□□□ -0.86
SHMT2-213ENST00000554600 HDAC3O15379 428 aa9.68□□□□□ -0.86
SHMT2-213ENST00000554600 NDUFB5O43674 189 aa9.68□□□□□ -0.86
SHMT2-213ENST00000554600 ANGPTL1O95841 491 aa9.68□□□□□ -0.86
SHMT2-213ENST00000554600 EPPINO95925 133 aa9.68□□□□□ -0.86
SHMT2-213ENST00000554600 IL2RAP01589 272 aa9.68□□□□□ -0.86
SHMT2-213ENST00000554600 EPHA3P29320 983 aa9.68□□□□□ -0.86
SHMT2-213ENST00000554600 CLNS1AP54105 237 aaKnown RBP9.68□□□□□ -0.86
SHMT2-213ENST00000554600 GAS1P54826 345 aa9.68□□□□□ -0.86
SHMT2-213ENST00000554600 DSCR4P56555 118 aaPredicted RBP9.68□□□□□ -0.86
SHMT2-213ENST00000554600 HBA1P69905 142 aa9.68□□□□□ -0.86
SHMT2-213ENST00000554600 HSPB2Q16082 182 aa9.68□□□□□ -0.86
SHMT2-213ENST00000554600 NHSL2Q5HYW2 709 aa9.68□□□□□ -0.86
SHMT2-213ENST00000554600 RIPPLY2Q5TAB7 128 aa9.68□□□□□ -0.86
SHMT2-213ENST00000554600 AAGABQ6PD74 315 aa9.68□□□□□ -0.86
SHMT2-213ENST00000554600 BHLHB9Q6PI77 547 aa9.68□□□□□ -0.86
SHMT2-213ENST00000554600 ZAR1Q86SH2 424 aa9.68□□□□□ -0.86
SHMT2-213ENST00000554600 LACC1Q8IV20 430 aa9.68□□□□□ -0.86
SHMT2-213ENST00000554600 WDR75Q8IWA0 830 aaKnown RBP9.68□□□□□ -0.86
SHMT2-213ENST00000554600 UBQLNLQ8IYU4 475 aa9.68□□□□□ -0.86
SHMT2-213ENST00000554600 ZNF614Q8N883 585 aa9.68□□□□□ -0.86
SHMT2-213ENST00000554600 VPS37AQ8NEZ2 397 aa9.68□□□□□ -0.86
SHMT2-213ENST00000554600 TNIP2Q8NFZ5 429 aa9.68□□□□□ -0.86
SHMT2-213ENST00000554600 OR2M3Q8NG83 312 aa9.68□□□□□ -0.86
SHMT2-213ENST00000554600 DYDC1Q8WWB3 177 aa9.68□□□□□ -0.86
SHMT2-213ENST00000554600 WDYHV1Q96HA8 205 aa9.68□□□□□ -0.86
SHMT2-213ENST00000554600 SLC35G5Q96KT7 338 aa9.68□□□□□ -0.86
SHMT2-213ENST00000554600 ATP6V1G3Q96LB4 118 aa9.68□□□□□ -0.86
SHMT2-213ENST00000554600 G6PC3Q9BUM1 346 aa9.68□□□□□ -0.86
SHMT2-213ENST00000554600 WDR55Q9H6Y2 383 aaPredicted RBP9.68□□□□□ -0.86
SHMT2-213ENST00000554600 FBXO34Q9NWN3 711 aa9.68□□□□□ -0.86
SHMT2-213ENST00000554600 GIN1Q9NXP7 522 aa9.68□□□□□ -0.86
SHMT2-213ENST00000554600 SPG11Q96JI7 2443 aa9.68□□□□□ -0.86
SHMT2-213ENST00000554600 APCP25054 2843 aa9.68□□□□□ -0.86
SHMT2-213ENST00000554600 ABCA4P78363 2273 aa9.67□□□□□ -0.86
SHMT2-213ENST00000554600 NPIPA5A0A0B4J1W7 369 aa9.67□□□□□ -0.86
SHMT2-213ENST00000554600 KDM4EB2RXH2 506 aaPredicted RBP9.67□□□□□ -0.86
SHMT2-213ENST00000554600 NPIPA7E9PJI5 369 aa9.67□□□□□ -0.86
SHMT2-213ENST00000554600 SLCO1B7G3V0H7 640 aa9.67□□□□□ -0.86
SHMT2-213ENST00000554600 SCDO00767 359 aa9.67□□□□□ -0.86
SHMT2-213ENST00000554600 SNNO75324 88 aaPredicted RBP9.67□□□□□ -0.86
SHMT2-213ENST00000554600 OXSR1O95747 527 aaPredicted RBP9.67□□□□□ -0.86
SHMT2-213ENST00000554600 NPIPA8P0DM63 369 aa9.67□□□□□ -0.86
SHMT2-213ENST00000554600 POU3F2P20265 443 aaPredicted RBP9.67□□□□□ -0.86
SHMT2-213ENST00000554600 BMP5P22003 454 aa9.67□□□□□ -0.86
SHMT2-213ENST00000554600 S100A3P33764 101 aa9.67□□□□□ -0.86
SHMT2-213ENST00000554600 MAP3K8P41279 467 aa9.67□□□□□ -0.86
SHMT2-213ENST00000554600 RNF144AP50876 292 aaPredicted RBP9.67□□□□□ -0.86
SHMT2-213ENST00000554600 DGKQP52824 942 aa9.67□□□□□ -0.86
SHMT2-213ENST00000554600 C21orf58P58505 322 aa9.67□□□□□ -0.86
SHMT2-213ENST00000554600 RPS26P62854 115 aaKnown RBP9.67□□□□□ -0.86
SHMT2-213ENST00000554600 C17orf67Q0P5P2 114 aa9.67□□□□□ -0.86
SHMT2-213ENST00000554600 FAM174BQ3ZCQ3 159 aa9.67□□□□□ -0.86
SHMT2-213ENST00000554600 SPANXN4Q5MJ08 99 aa9.67□□□□□ -0.86
SHMT2-213ENST00000554600 DCST2Q5T1A1 773 aa9.67□□□□□ -0.86
SHMT2-213ENST00000554600 ANXA8L1Q5VT79 327 aa9.67□□□□□ -0.86
SHMT2-213ENST00000554600 CDC73Q6P1J9 531 aa9.67□□□□□ -0.86
SHMT2-213ENST00000554600 CHMP1BQ7LBR1 199 aa9.67□□□□□ -0.86
SHMT2-213ENST00000554600 HDXQ7Z353 690 aa9.67□□□□□ -0.86
SHMT2-213ENST00000554600 GDF7Q7Z4P5 450 aa9.67□□□□□ -0.86
SHMT2-213ENST00000554600 C6orf120Q7Z4R8 191 aa9.67□□□□□ -0.86
SHMT2-213ENST00000554600 SPATA19Q7Z5L4 167 aa9.67□□□□□ -0.86
SHMT2-213ENST00000554600 CAMKMTQ7Z624 323 aa9.67□□□□□ -0.86
SHMT2-213ENST00000554600 CLEC4FQ8N1N0 589 aa9.67□□□□□ -0.86
SHMT2-213ENST00000554600 FADS6Q8N9I5 356 aa9.67□□□□□ -0.86
SHMT2-213ENST00000554600 OR5M1Q8NGP8 315 aa9.67□□□□□ -0.86
SHMT2-213ENST00000554600 OR4C3Q8NH37 302 aa9.67□□□□□ -0.86
SHMT2-213ENST00000554600 PSMA8Q8TAA3 256 aa9.67□□□□□ -0.86
SHMT2-213ENST00000554600 LRRC8CQ8TDW0 803 aa9.67□□□□□ -0.86
SHMT2-213ENST00000554600 RNF138Q8WVD3 245 aa9.67□□□□□ -0.86
SHMT2-213ENST00000554600 SMPDL3BQ92485 455 aa9.67□□□□□ -0.86
SHMT2-213ENST00000554600 ZNF75CPQ92670 426 aaPredicted RBP9.67□□□□□ -0.86
SHMT2-213ENST00000554600 SH3YL1Q96HL8 342 aaPredicted RBP9.67□□□□□ -0.86
SHMT2-213ENST00000554600 MARK4Q96L34 752 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms