RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 TYRP14679 529 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 GALP22466 123 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 NR4A1P22736 598 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 CPN2P22792 545 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 XPAP23025 273 aaPredicted RBP5.55□□□□□ -1.52
VPS33B-203ENST00000554264 CHMP24386 653 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 ITPKBP27987 946 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 EIF2S3P41091 472 aaKnown RBP5.55□□□□□ -1.52
VPS33B-203ENST00000554264 CAPZA2P47755 286 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 MTNR1BP49286 362 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 TPMTP51580 245 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 LSM3P62310 102 aaKnown RBP5.55□□□□□ -1.52
VPS33B-203ENST00000554264 KCNJ10P78508 379 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 ST3GAL4Q11206 333 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 COX10Q12887 443 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 MLLT11Q13015 90 aaPredicted RBP5.55□□□□□ -1.52
VPS33B-203ENST00000554264 SLC13A2Q13183 592 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 E2F2Q14209 437 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 RGNQ15493 299 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 HSD17B12Q53GQ0 312 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 MPP7Q5T2T1 576 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 DDI2Q5TDH0 399 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 OR4F3Q6IEY1 312 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 FAM111BQ6SJ93 734 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 ZNF621Q6ZSS3 439 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 USP45Q70EL2 814 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 GDPD3Q7L5L3 318 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 DSG4Q86SJ6 1040 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 TMEM25Q86YD3 366 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 SYTL1Q8IYJ3 562 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 ZNF843Q8N446 348 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 ZNF808Q8N4W9 903 aaPredicted RBP5.55□□□□□ -1.52
VPS33B-203ENST00000554264 KRTCAP2Q8N6L1 136 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 PROKR2Q8NFJ6 384 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 OR7D4Q8NG98 312 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 OR4C15Q8NGM1 316 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 PIH1D2Q8WWB5 315 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 ASZ1Q8WWH4 475 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 SGCDQ92629 289 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 ZNF764Q96H86 408 aaPredicted RBP5.55□□□□□ -1.52
VPS33B-203ENST00000554264 TMEM80Q96HE8 168 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 MED30Q96HR3 178 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 RAX2Q96IS3 184 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 TSSK3Q96PN8 268 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 FEVQ99581 238 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 PIP5K1AQ99755 562 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 BBS2Q9BXC9 721 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 CHST8Q9H2A9 424 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 TP63Q9H3D4 680 aaPredicted RBP5.55□□□□□ -1.52
VPS33B-203ENST00000554264 MARCH7Q9H992 704 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 FZD3Q9NPG1 666 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 ITM2CQ9NQX7 267 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 RASSF1Q9NS23 344 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 DDX28Q9NUL7 540 aaKnown RBP5.55□□□□□ -1.52
VPS33B-203ENST00000554264 NDUFB11Q9NX14 153 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 ELOVL2Q9NXB9 296 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 VNN3Q9NY84 501 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 SH3BP4Q9P0V3 963 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 LHX3Q9UBR4 397 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 ATP6V1HQ9UI12 483 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 LSM7Q9UK45 103 aaKnown RBP5.55□□□□□ -1.52
VPS33B-203ENST00000554264 TMCC3Q9ULS5 477 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 FZD4Q9ULV1 537 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.55□□□□□ -1.52
VPS33B-203ENST00000554264 SSR3Q9UNL2 185 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 MGAT4BQ9UQ53 548 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 PPIL1Q9Y3C6 166 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 CMAHPQ9Y471 501 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 PCDHGA1Q9Y5H4 931 aa5.55□□□□□ -1.52
VPS33B-203ENST00000554264 ANAPC1Q9H1A4 1944 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 HELZ2Q9BYK8 2649 aaKnown RBP5.54□□□□□ -1.52
VPS33B-203ENST00000554264 LOC100506127A0A0U1RQW1 187 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 HYKKA2RU49 373 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 ZAR1LA6NP61 321 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 PRRT4C9JH25 899 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 hCG_2039718K7EN88 272 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 FOXE1O00358 373 aaPredicted RBP5.54□□□□□ -1.52
VPS33B-203ENST00000554264 FAAHO00519 579 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 MYL12BO14950 172 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 CHST10O43529 356 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 TBX19O60806 448 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 HLA-DQB1P01920 261 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 CATP04040 527 aaKnown RBP5.54□□□□□ -1.52
VPS33B-203ENST00000554264 IFNW1P05000 195 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 C1SP09871 688 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 IRF1P10914 325 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 IL7P13232 177 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 ZNF30P17039 623 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 GSTM3P21266 225 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 CBLP22681 906 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 CTSSP25774 331 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 ALDH4A1P30038 563 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 PKLRP30613 574 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 SLC6A4P31645 630 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 SDC2P34741 201 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 CA5AP35218 305 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 CASRP41180 1078 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 XCR1P46094 333 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 RGRP47804 291 aa5.54□□□□□ -1.52
VPS33B-203ENST00000554264 PGFP49763 221 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms