RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 PCDH8O95206 1070 aa11.48□□□□□ -0.57
SHMT2-207ENST00000553837 BCHEP06276 602 aa11.48□□□□□ -0.57
SHMT2-207ENST00000553837 OSMP13725 252 aa11.48□□□□□ -0.57
SHMT2-207ENST00000553837 SLC6A1P30531 599 aa11.48□□□□□ -0.57
SHMT2-207ENST00000553837 PTGER1P34995 402 aa11.48□□□□□ -0.57
SHMT2-207ENST00000553837 HOXA1P49639 335 aaPredicted RBP11.48□□□□□ -0.57
SHMT2-207ENST00000553837 ZNF91Q05481 1191 aa11.48□□□□□ -0.57
SHMT2-207ENST00000553837 ADAM15Q13444 863 aa11.48□□□□□ -0.57
SHMT2-207ENST00000553837 OCLNQ16625 522 aa11.48□□□□□ -0.57
SHMT2-207ENST00000553837 CRTC2Q53ET0 693 aaPredicted RBP11.48□□□□□ -0.57
SHMT2-207ENST00000553837 FCRLBQ6BAA4 426 aa11.48□□□□□ -0.57
SHMT2-207ENST00000553837 OLIG3Q7RTU3 272 aa11.48□□□□□ -0.57
SHMT2-207ENST00000553837 COMTD1Q86VU5 262 aa11.48□□□□□ -0.57
SHMT2-207ENST00000553837 RBM45Q8IUH3 476 aaKnown RBP11.48□□□□□ -0.57
SHMT2-207ENST00000553837 OR4D11Q8NGI4 311 aa11.48□□□□□ -0.57
SHMT2-207ENST00000553837 OR8K3Q8NH51 312 aa11.48□□□□□ -0.57
SHMT2-207ENST00000553837 TM9SF4Q92544 642 aa11.48□□□□□ -0.57
SHMT2-207ENST00000553837 EXOSC8Q96B26 276 aaKnown RBP11.48□□□□□ -0.57
SHMT2-207ENST00000553837 RADILQ96JH8 1075 aa11.48□□□□□ -0.57
SHMT2-207ENST00000553837 TEFMQ96QE5 360 aaKnown RBP11.48□□□□□ -0.57
SHMT2-207ENST00000553837 INSM2Q96T92 566 aaPredicted RBP11.48□□□□□ -0.57
SHMT2-207ENST00000553837 MACROD1Q9BQ69 325 aa11.48□□□□□ -0.57
SHMT2-207ENST00000553837 AIF1LQ9BQI0 150 aa11.48□□□□□ -0.57
SHMT2-207ENST00000553837 TSSK6Q9BXA6 273 aa11.48□□□□□ -0.57
SHMT2-207ENST00000553837 NLNQ9BYT8 704 aa11.48□□□□□ -0.57
SHMT2-207ENST00000553837 NMNAT1Q9HAN9 279 aaPredicted RBP11.48□□□□□ -0.57
SHMT2-207ENST00000553837 CD93Q9NPY3 652 aa11.48□□□□□ -0.57
SHMT2-207ENST00000553837 CPNE7Q9UBL6 633 aa11.48□□□□□ -0.57
SHMT2-207ENST00000553837 NDOR1Q9UHB4 597 aa11.48□□□□□ -0.57
SHMT2-207ENST00000553837 ZFR2Q9UPR6 939 aaKnown RBP11.48□□□□□ -0.57
SHMT2-207ENST00000553837 ANGPT4Q9Y264 503 aa11.48□□□□□ -0.57
SHMT2-207ENST00000553837 RNF215Q9Y6U7 377 aa11.48□□□□□ -0.57
SHMT2-207ENST00000553837 DSPPQ9NZW4 1301 aa11.47□□□□□ -0.57
SHMT2-207ENST00000553837 TRBV4-1A0A0J9YWV2 114 aa11.47□□□□□ -0.57
SHMT2-207ENST00000553837 SMIM30A4D0T7 59 aa11.47□□□□□ -0.57
SHMT2-207ENST00000553837 C4orf51C9J302 202 aa11.47□□□□□ -0.57
SHMT2-207ENST00000553837 CASKO14936 926 aa11.47□□□□□ -0.57
SHMT2-207ENST00000553837 PRKRAO75569 313 aaKnown RBP11.47□□□□□ -0.57
SHMT2-207ENST00000553837 KAT7O95251 611 aa11.47□□□□□ -0.57
SHMT2-207ENST00000553837 CCR8P51685 355 aa11.47□□□□□ -0.57
SHMT2-207ENST00000553837 MANFP55145 182 aaKnown RBP11.47□□□□□ -0.57
SHMT2-207ENST00000553837 CSNK1G2P78368 415 aa11.47□□□□□ -0.57
SHMT2-207ENST00000553837 FLI1Q01543 452 aaPredicted RBP11.47□□□□□ -0.57
SHMT2-207ENST00000553837 ILKQ13418 452 aa11.47□□□□□ -0.57
SHMT2-207ENST00000553837 ARHGAP19Q14CB8 494 aa11.47□□□□□ -0.57
SHMT2-207ENST00000553837 IRF4Q15306 451 aa11.47□□□□□ -0.57
SHMT2-207ENST00000553837 C6orf132Q5T0Z8 1188 aa11.47□□□□□ -0.57
SHMT2-207ENST00000553837 ZNF770Q6IQ21 691 aaPredicted RBP11.47□□□□□ -0.57
SHMT2-207ENST00000553837 REEP3Q6NUK4 255 aa11.47□□□□□ -0.57
SHMT2-207ENST00000553837 PAQR6Q6TCH4 344 aa11.47□□□□□ -0.57
SHMT2-207ENST00000553837 TRILQ7L0X0 811 aa11.47□□□□□ -0.57
SHMT2-207ENST00000553837 ZBTB44Q8NCP5 570 aa11.47□□□□□ -0.57
SHMT2-207ENST00000553837 OR8J1Q8NGP2 316 aa11.47□□□□□ -0.57
SHMT2-207ENST00000553837 OR5P2Q8WZ92 322 aa11.47□□□□□ -0.57
SHMT2-207ENST00000553837 RAB7BQ96AH8 199 aa11.47□□□□□ -0.57
SHMT2-207ENST00000553837 TMEM19Q96HH6 336 aa11.47□□□□□ -0.57
SHMT2-207ENST00000553837 ZNF416Q9BWM5 594 aa11.47□□□□□ -0.57
SHMT2-207ENST00000553837 TEX101Q9BY14 249 aa11.47□□□□□ -0.57
SHMT2-207ENST00000553837 SYNPO2LQ9H987 977 aa11.47□□□□□ -0.57
SHMT2-207ENST00000553837 SLC35C2Q9NQQ7 365 aa11.47□□□□□ -0.57
SHMT2-207ENST00000553837 RDH8Q9NYR8 311 aa11.47□□□□□ -0.57
SHMT2-207ENST00000553837 PRKAG2Q9UGJ0 569 aa11.47□□□□□ -0.57
SHMT2-207ENST00000553837 MKL2Q9ULH7 1088 aa11.47□□□□□ -0.57
SHMT2-207ENST00000553837 TMEM5Q9Y2B1 443 aa11.47□□□□□ -0.57
SHMT2-207ENST00000553837 NINQ8N4C6 2090 aa11.47□□□□□ -0.57
SHMT2-207ENST00000553837 ATG2BQ96BY7 2078 aa11.47□□□□□ -0.57
SHMT2-207ENST00000553837 SPTBN5Q9NRC6 3674 aaKnown RBP11.47□□□□□ -0.57
SHMT2-207ENST00000553837 TUBAL3A6NHL2 446 aa11.47□□□□□ -0.57
SHMT2-207ENST00000553837 HMGN4O00479 90 aa11.47□□□□□ -0.57
SHMT2-207ENST00000553837 SCAMP1O15126 338 aa11.47□□□□□ -0.57
SHMT2-207ENST00000553837 OR1F1O43749 312 aa11.47□□□□□ -0.57
SHMT2-207ENST00000553837 SLC19A2O60779 497 aa11.47□□□□□ -0.57
SHMT2-207ENST00000553837 RAB36O95755 333 aa11.47□□□□□ -0.57
SHMT2-207ENST00000553837 PAK4O96013 591 aaPredicted RBP11.47□□□□□ -0.57
SHMT2-207ENST00000553837 ADAP00813 363 aa11.47□□□□□ -0.57
SHMT2-207ENST00000553837 IGFBP1P08833 259 aaPredicted RBP11.47□□□□□ -0.57
SHMT2-207ENST00000553837 ACP5P13686 325 aa11.47□□□□□ -0.57
SHMT2-207ENST00000553837 RHCEP18577 417 aa11.47□□□□□ -0.57
SHMT2-207ENST00000553837 FGF9P31371 208 aaPredicted RBP11.47□□□□□ -0.57
SHMT2-207ENST00000553837 FRKP42685 505 aaPredicted RBP11.47□□□□□ -0.57
SHMT2-207ENST00000553837 AGFG1P52594 562 aaKnown RBP11.47□□□□□ -0.57
SHMT2-207ENST00000553837 BTN1A1Q13410 526 aa11.47□□□□□ -0.57
SHMT2-207ENST00000553837 RUNX3Q13761 415 aa11.47□□□□□ -0.57
SHMT2-207ENST00000553837 GPR176Q14439 515 aa11.47□□□□□ -0.57
SHMT2-207ENST00000553837 HEPACAMQ14CZ8 416 aa11.47□□□□□ -0.57
SHMT2-207ENST00000553837 PDGFRLQ15198 375 aa11.47□□□□□ -0.57
SHMT2-207ENST00000553837 SEC23BQ15437 767 aa11.47□□□□□ -0.57
SHMT2-207ENST00000553837 CCDC85BQ15834 202 aaPredicted RBP11.47□□□□□ -0.57
SHMT2-207ENST00000553837 CD276Q5ZPR3 534 aa11.47□□□□□ -0.57
SHMT2-207ENST00000553837 ZNF793Q6ZN11 406 aa11.47□□□□□ -0.57
SHMT2-207ENST00000553837 RTL4Q6ZR62 310 aa11.47□□□□□ -0.57
SHMT2-207ENST00000553837 QSOX2Q6ZRP7 698 aa11.47□□□□□ -0.57
SHMT2-207ENST00000553837 C6orf120Q7Z4R8 191 aa11.47□□□□□ -0.57
SHMT2-207ENST00000553837 OR11H4Q8NGC9 324 aa11.47□□□□□ -0.57
SHMT2-207ENST00000553837 SMPDL3AQ92484 453 aa11.47□□□□□ -0.57
SHMT2-207ENST00000553837 ATF6BQ99941 703 aa11.47□□□□□ -0.57
SHMT2-207ENST00000553837 GSX2Q9BZM3 304 aa11.47□□□□□ -0.57
SHMT2-207ENST00000553837 PITHD1Q9GZP4 211 aaPredicted RBP11.47□□□□□ -0.57
SHMT2-207ENST00000553837 HDHD2Q9H0R4 259 aa11.47□□□□□ -0.57
SHMT2-207ENST00000553837 KLHL31Q9H511 634 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms