RNA–Protein interactions for RNA: ENST00000553602.1

TMEM55B-204, humanhuman

TSL 2

Gene TMEM55B, Length 382 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-204ENST00000553602 FZD5Q13467 585 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 IL18Q14116 193 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 SLC9A5Q14940 896 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 GRIN2CQ14957 1233 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 ARHGEF6Q15052 776 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 COL28A1Q2UY09 1125 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 HNRNPA1L2Q32P51 320 aaKnown RBP4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 CCDC58Q4VC31 144 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 EXOSC6Q5RKV6 272 aaKnown RBP4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 LY6G5CQ5SRR4 150 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 SPOUT1Q5T280 376 aaKnown RBP4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 ZBTB37Q5TC79 503 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 NDUFAF5Q5TEU4 345 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 RAET1GQ6H3X3 334 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 SIGIRRQ6IA17 410 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 LAMTOR1Q6IAA8 161 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 OR4C11Q6IEV9 310 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 SLC48A1Q6P1K1 146 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 NIPAL3Q6P499 406 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 SMARCD3Q6STE5 483 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 PAMR1Q6UXH9 720 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 TMEM91Q6ZNR0 172 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 FGD2Q7Z6J4 655 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 PXKQ7Z7A4 578 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 LRRTM4Q86VH4 590 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 MARCH9Q86YJ5 346 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 RBM45Q8IUH3 476 aaKnown RBP4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 RNF113BQ8IZP6 322 aaKnown RBP4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 MMP21Q8N119 569 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 C9orf62Q8N4C0 152 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 HDDC3Q8N4P3 179 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 EID2Q8N6I1 236 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 ACBD7Q8N6N7 88 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 CELF5Q8N6W0 485 aaKnown RBP4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 SYT14Q8NB59 555 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 TP53I13Q8NBR0 393 aaPredicted RBP4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 KREMEN2Q8NCW0 462 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 OR2T33Q8NG76 320 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 OR2L5Q8NG80 312 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 OR13H1Q8NG92 308 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 OR5AR1Q8NGP9 310 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 OR2L8Q8NGY9 312 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 OR4Q3Q8NH05 313 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 HAVCR2Q8TDQ0 301 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 GANCQ8TET4 914 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 UBASH3BQ8TF42 649 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 XAGE5Q8WWM1 108 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 DEDD2Q8WXF8 326 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 GATAD2BQ8WXI9 593 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 OR8D1Q8WZ84 308 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 PHYHIPQ92561 330 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 TFGQ92734 400 aaPredicted RBP4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 RFT1Q96AA3 541 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 EXOSC8Q96B26 276 aaKnown RBP4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 ZFYVE19Q96K21 471 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 MS4A4EQ96PG1 132 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 F2RL3Q96RI0 385 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 DCLRE1CQ96SD1 692 aaKnown RBP4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 GPA33Q99795 319 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 TM9SF2Q99805 663 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 DHRS9Q9BPW9 319 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 TIMM29Q9BSF4 260 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 DPH7Q9BTV6 452 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 SORBS1Q9BX66 1292 aaKnown RBP4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 HDAC8Q9BY41 377 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 GSX2Q9BZM3 304 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 ACTR6Q9GZN1 396 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 TWSG1Q9GZX9 223 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 ABCG4Q9H172 646 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 GHITMQ9H3K2 345 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 OSGEPL1Q9H4B0 414 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 RANBP3Q9H6Z4 567 aaPredicted RBP4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 SLC28A3Q9HAS3 691 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 ATP13A2Q9NQ11 1180 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 PLSCR3Q9NRY6 295 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 C14orf105Q9NVL8 296 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 MCUBQ9NWR8 336 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 LYARQ9NX58 379 aaKnown RBP4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 HAO2Q9NYQ3 351 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 TAC3Q9UHF0 121 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 SLC13A4Q9UKG4 626 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 FBXL21Q9UKT6 434 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 ELF5Q9UKW6 265 aaPredicted RBP4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 NUP50Q9UKX7 468 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 CES1P1Q9UKY3 287 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 TBX21Q9UL17 535 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 SATB2Q9UPW6 733 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 NPFFR2Q9Y5X5 522 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 NUBP2Q9Y5Y2 271 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 TET1Q8NFU7 2136 aa4.91□□□□□ -1.62
TMEM55B-204ENST00000553602 TBC1D3KA0A087X1G2 549 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 SHISA3A0PJX4 238 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 TBC1D3BA6NDS4 549 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 TBC1D3FA6NER0 549 aaPredicted RBP4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 A8MV72 311 aaPredicted RBP4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 ISM1B1AKI9 464 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 B8ZZF3 427 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 C1QTNF3-AMACRE9PGA6 284 aa4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 KPNA3O00505 521 aaPredicted RBP4.9□□□□□ -1.63
TMEM55B-204ENST00000553602 RNF13O43567 381 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms