RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 CFL2Q9Y281 166 aa18.08■□□□□ 0.49
RBFOX1-215ENST00000553186 OR10H1Q9Y4A9 318 aa18.08■□□□□ 0.49
RBFOX1-215ENST00000553186 SH3PXD2BA1X283 911 aa18.08■□□□□ 0.48
RBFOX1-215ENST00000553186 UGT2B11O75310 529 aa18.08■□□□□ 0.48
RBFOX1-215ENST00000553186 GPR143P51810 404 aa18.08■□□□□ 0.48
RBFOX1-215ENST00000553186 ZNF691Q5VV52 312 aa18.08■□□□□ 0.48
RBFOX1-215ENST00000553186 FAAH2Q6GMR7 532 aa18.08■□□□□ 0.48
RBFOX1-215ENST00000553186 THAP5Q7Z6K1 395 aa18.08■□□□□ 0.48
RBFOX1-215ENST00000553186 C8orf59Q8N0T1 100 aaPredicted RBP18.08■□□□□ 0.48
RBFOX1-215ENST00000553186 OR1N1Q8NGS0 311 aa18.08■□□□□ 0.48
RBFOX1-215ENST00000553186 LMF1Q96S06 567 aa18.08■□□□□ 0.48
RBFOX1-215ENST00000553186 SPSB2Q99619 263 aa18.08■□□□□ 0.48
RBFOX1-215ENST00000553186 MESP1Q9BRJ9 268 aa18.08■□□□□ 0.48
RBFOX1-215ENST00000553186 TMEM9BQ9NQ34 198 aa18.08■□□□□ 0.48
RBFOX1-215ENST00000553186 NDRG4Q9ULP0 352 aaKnown RBP18.08■□□□□ 0.48
RBFOX1-215ENST00000553186 MYRFQ9Y2G1 1151 aa18.08■□□□□ 0.48
RBFOX1-215ENST00000553186 PCDHGA10Q9Y5H3 936 aa18.08■□□□□ 0.48
RBFOX1-215ENST00000553186 BCKDKO14874 412 aa18.07■□□□□ 0.48
RBFOX1-215ENST00000553186 OXSR1O95747 527 aaPredicted RBP18.07■□□□□ 0.48
RBFOX1-215ENST00000553186 RNF144AP50876 292 aaPredicted RBP18.07■□□□□ 0.48
RBFOX1-215ENST00000553186 ISL1P61371 349 aa18.07■□□□□ 0.48
RBFOX1-215ENST00000553186 IL18R1Q13478 541 aa18.07■□□□□ 0.48
RBFOX1-215ENST00000553186 ZNF141Q15928 474 aa18.07■□□□□ 0.48
RBFOX1-215ENST00000553186 CPEB4Q17RY0 729 aaKnown RBP eCLIP18.07■□□□□ 0.48
RBFOX1-215ENST00000553186 ENTPD8Q5MY95 495 aa18.07■□□□□ 0.48
RBFOX1-215ENST00000553186 PDZK1Q5T2W1 519 aa18.07■□□□□ 0.48
RBFOX1-215ENST00000553186 MRPL14Q6P1L8 145 aaKnown RBP18.07■□□□□ 0.48
RBFOX1-215ENST00000553186 PODNL1Q6PEZ8 512 aa18.07■□□□□ 0.48
RBFOX1-215ENST00000553186 TTC33Q6PID6 262 aaPredicted RBP18.07■□□□□ 0.48
RBFOX1-215ENST00000553186 C9orf40Q8IXQ3 194 aa18.07■□□□□ 0.48
RBFOX1-215ENST00000553186 ADAMTS16Q8TE57 1224 aa18.07■□□□□ 0.48
RBFOX1-215ENST00000553186 NR4A3Q92570 626 aa18.07■□□□□ 0.48
RBFOX1-215ENST00000553186 ART5Q96L15 291 aa18.07■□□□□ 0.48
RBFOX1-215ENST00000553186 NXF5Q9H1B4 397 aaKnown RBP18.07■□□□□ 0.48
RBFOX1-215ENST00000553186 SEMA4GQ9NTN9 838 aa18.07■□□□□ 0.48
RBFOX1-215ENST00000553186 POFUT2Q9Y2G5 429 aa18.07■□□□□ 0.48
RBFOX1-215ENST00000553186 NTNG1Q9Y2I2 539 aa18.07■□□□□ 0.48
RBFOX1-215ENST00000553186 RALGAPA1Q6GYQ0 2036 aa18.07■□□□□ 0.48
RBFOX1-215ENST00000553186 CPSF4LA6NMK7 179 aaKnown RBP18.07■□□□□ 0.48
RBFOX1-215ENST00000553186 TNFRSF10AO00220 468 aa18.07■□□□□ 0.48
RBFOX1-215ENST00000553186 HEXBP07686 556 aa18.07■□□□□ 0.48
RBFOX1-215ENST00000553186 CCNYL3P0C7X3 344 aa18.07■□□□□ 0.48
RBFOX1-215ENST00000553186 PRG2P13727 222 aa18.07■□□□□ 0.48
RBFOX1-215ENST00000553186 POU2F1P14859 743 aa18.07■□□□□ 0.48
RBFOX1-215ENST00000553186 DRD5P21918 477 aa18.07■□□□□ 0.48
RBFOX1-215ENST00000553186 TAS2R41P59536 307 aa18.07■□□□□ 0.48
RBFOX1-215ENST00000553186 RAPSNQ13702 412 aa18.07■□□□□ 0.48
RBFOX1-215ENST00000553186 KEAP1Q14145 624 aa18.07■□□□□ 0.48
RBFOX1-215ENST00000553186 EBPQ15125 230 aaKnown RBP18.07■□□□□ 0.48
RBFOX1-215ENST00000553186 ANKRD37Q7Z713 158 aa18.07■□□□□ 0.48
RBFOX1-215ENST00000553186 ZNF786Q8N393 782 aa18.07■□□□□ 0.48
RBFOX1-215ENST00000553186 MORN4Q8NDC4 146 aa18.07■□□□□ 0.48
RBFOX1-215ENST00000553186 MCHR1Q99705 422 aa18.07■□□□□ 0.48
RBFOX1-215ENST00000553186 CMKLR1Q99788 373 aa18.07■□□□□ 0.48
RBFOX1-215ENST00000553186 FRG2CA6NGY1 282 aa18.06■□□□□ 0.48
RBFOX1-215ENST00000553186 B4E171 279 aa18.06■□□□□ 0.48
RBFOX1-215ENST00000553186 AP3D1O14617 1153 aa18.06■□□□□ 0.48
RBFOX1-215ENST00000553186 ALOX12BO75342 701 aa18.06■□□□□ 0.48
RBFOX1-215ENST00000553186 CYP7B1O75881 506 aa18.06■□□□□ 0.48
RBFOX1-215ENST00000553186 THY1P04216 161 aa18.06■□□□□ 0.48
RBFOX1-215ENST00000553186 TSPAN7P41732 249 aa18.06■□□□□ 0.48
RBFOX1-215ENST00000553186 LSM11P83369 360 aaKnown RBP eCLIP18.06■□□□□ 0.48
RBFOX1-215ENST00000553186 PARP8Q8N3A8 854 aa18.06■□□□□ 0.48
RBFOX1-215ENST00000553186 AMER2Q8N7J2 671 aa18.06■□□□□ 0.48
RBFOX1-215ENST00000553186 GTPBP3Q969Y2 492 aaKnown RBP18.06■□□□□ 0.48
RBFOX1-215ENST00000553186 LRFN5Q96NI6 719 aa18.06■□□□□ 0.48
RBFOX1-215ENST00000553186 IGHV3-20A0A0C4DH32 117 aa18.06■□□□□ 0.48
RBFOX1-215ENST00000553186 TRIM64A6NGJ6 449 aa18.06■□□□□ 0.48
RBFOX1-215ENST00000553186 GKN3PP0CG01 181 aa18.06■□□□□ 0.48
RBFOX1-215ENST00000553186 RYKP34925 604 aa18.06■□□□□ 0.48
RBFOX1-215ENST00000553186 ATP12AP54707 1039 aa18.06■□□□□ 0.48
RBFOX1-215ENST00000553186 PGBD2Q6P3X8 592 aa18.06■□□□□ 0.48
RBFOX1-215ENST00000553186 OR4C3Q8NH37 302 aa18.06■□□□□ 0.48
RBFOX1-215ENST00000553186 LCORQ96JN0 433 aaPredicted RBP18.06■□□□□ 0.48
RBFOX1-215ENST00000553186 PITX2Q99697 317 aa18.06■□□□□ 0.48
RBFOX1-215ENST00000553186 ZNF556Q9HAH1 456 aa18.06■□□□□ 0.48
RBFOX1-215ENST00000553186 SLC39A1Q9NY26 324 aa18.06■□□□□ 0.48
RBFOX1-215ENST00000553186 C2orf92A0A1B0GVN3 265 aa18.05■□□□□ 0.48
RBFOX1-215ENST00000553186 A6NHS1 94 aa18.05■□□□□ 0.48
RBFOX1-215ENST00000553186 OR10H3O60404 316 aa18.05■□□□□ 0.48
RBFOX1-215ENST00000553186 ADAP00813 363 aa18.05■□□□□ 0.48
RBFOX1-215ENST00000553186 AGXTP21549 392 aa18.05■□□□□ 0.48
RBFOX1-215ENST00000553186 EMP2P54851 167 aa18.05■□□□□ 0.48
RBFOX1-215ENST00000553186 RPP38P78345 283 aaKnown RBP18.05■□□□□ 0.48
RBFOX1-215ENST00000553186 INSM1Q01101 510 aaPredicted RBP18.05■□□□□ 0.48
RBFOX1-215ENST00000553186 CD47Q08722 323 aa18.05■□□□□ 0.48
RBFOX1-215ENST00000553186 ST3GAL3Q11203 375 aa18.05■□□□□ 0.48
RBFOX1-215ENST00000553186 CTU2Q2VPK5 515 aaKnown RBP18.05■□□□□ 0.48
RBFOX1-215ENST00000553186 KCTD21Q4G0X4 260 aa18.05■□□□□ 0.48
RBFOX1-215ENST00000553186 CCDC157Q569K6 752 aa18.05■□□□□ 0.48
RBFOX1-215ENST00000553186 KLHL17Q6TDP4 642 aa18.05■□□□□ 0.48
RBFOX1-215ENST00000553186 GRAMD2AQ8IUY3 354 aa18.05■□□□□ 0.48
RBFOX1-215ENST00000553186 CCDC71Q8IV32 467 aaPredicted RBP18.05■□□□□ 0.48
RBFOX1-215ENST00000553186 FBLIM1Q8WUP2 373 aa18.05■□□□□ 0.48
RBFOX1-215ENST00000553186 HRASLS5Q96KN8 279 aa18.05■□□□□ 0.48
RBFOX1-215ENST00000553186 ARMC7Q9H6L4 198 aa18.05■□□□□ 0.48
RBFOX1-215ENST00000553186 COPS7AQ9UBW8 275 aa18.05■□□□□ 0.48
RBFOX1-215ENST00000553186 MGAT4BQ9UQ53 548 aa18.05■□□□□ 0.48
RBFOX1-215ENST00000553186 DPPA5A6NC42 116 aa18.04■□□□□ 0.48
RBFOX1-215ENST00000553186 C4orf47A7E2U8 309 aa18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms