RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 APOC2P02655 101 aa4.57□□□□□ -1.68
CKAP4-203ENST00000553039 SERPING1P05155 500 aa4.57□□□□□ -1.68
CKAP4-203ENST00000553039 F13BP05160 661 aa4.57□□□□□ -1.68
CKAP4-203ENST00000553039 C8GP07360 202 aa4.57□□□□□ -1.68
CKAP4-203ENST00000553039 PABPC4LP0CB38 370 aaKnown RBP4.57□□□□□ -1.68
CKAP4-203ENST00000553039 ANPEPP15144 967 aa4.57□□□□□ -1.68
CKAP4-203ENST00000553039 DDX5P17844 614 aaKnown RBP4.57□□□□□ -1.68
CKAP4-203ENST00000553039 PTAFRP25105 342 aa4.57□□□□□ -1.68
CKAP4-203ENST00000553039 APEX1P27695 318 aaKnown RBP4.57□□□□□ -1.68
CKAP4-203ENST00000553039 GSTM2P28161 218 aa4.57□□□□□ -1.68
CKAP4-203ENST00000553039 TLX1P31314 330 aaPredicted RBP4.57□□□□□ -1.68
CKAP4-203ENST00000553039 APOBEC3AP31941 199 aaPredicted RBP4.57□□□□□ -1.68
CKAP4-203ENST00000553039 CETN2P41208 172 aa4.57□□□□□ -1.68
CKAP4-203ENST00000553039 LIM2P55344 173 aa4.57□□□□□ -1.68
CKAP4-203ENST00000553039 EIF3EP60228 445 aaKnown RBP4.57□□□□□ -1.68
CKAP4-203ENST00000553039 RPS13P62277 151 aaKnown RBP4.57□□□□□ -1.68
CKAP4-203ENST00000553039 KCNJ11Q14654 390 aa4.57□□□□□ -1.68
CKAP4-203ENST00000553039 PON3Q15166 354 aa4.57□□□□□ -1.68
CKAP4-203ENST00000553039 CD276Q5ZPR3 534 aa4.57□□□□□ -1.68
CKAP4-203ENST00000553039 DUPD1Q68J44 220 aa4.57□□□□□ -1.68
CKAP4-203ENST00000553039 BICRALQ6AI39 1079 aa4.57□□□□□ -1.68
CKAP4-203ENST00000553039 FAHD2BQ6P2I3 314 aaPredicted RBP4.57□□□□□ -1.68
CKAP4-203ENST00000553039 SLC22A25Q6T423 547 aa4.57□□□□□ -1.68
CKAP4-203ENST00000553039 KLHL17Q6TDP4 642 aa4.57□□□□□ -1.68
CKAP4-203ENST00000553039 TMEM108Q6UXF1 575 aa4.57□□□□□ -1.68
CKAP4-203ENST00000553039 PPP1R21Q6ZMI0 780 aa4.57□□□□□ -1.68
CKAP4-203ENST00000553039 CYHR1Q6ZMK1 362 aa4.57□□□□□ -1.68
CKAP4-203ENST00000553039 Q6ZSR9 355 aa4.57□□□□□ -1.68
CKAP4-203ENST00000553039 MOGAT3Q86VF5 341 aa4.57□□□□□ -1.68
CKAP4-203ENST00000553039 FAM90A1Q86YD7 464 aa4.57□□□□□ -1.68
CKAP4-203ENST00000553039 PLCZ1Q86YW0 608 aa4.57□□□□□ -1.68
CKAP4-203ENST00000553039 KLHDC8BQ8IXV7 354 aa4.57□□□□□ -1.68
CKAP4-203ENST00000553039 KLHDC8AQ8IYD2 350 aa4.57□□□□□ -1.68
CKAP4-203ENST00000553039 UBQLNLQ8IYU4 475 aa4.57□□□□□ -1.68
CKAP4-203ENST00000553039 BPIFB2Q8N4F0 458 aa4.57□□□□□ -1.68
CKAP4-203ENST00000553039 SPATA6LQ8N4H0 392 aa4.57□□□□□ -1.68
CKAP4-203ENST00000553039 NKAIN3Q8N8D7 197 aa4.57□□□□□ -1.68
CKAP4-203ENST00000553039 GBP7Q8N8V2 638 aaPredicted RBP4.57□□□□□ -1.68
CKAP4-203ENST00000553039 ANKS4BQ8N8V4 417 aa4.57□□□□□ -1.68
CKAP4-203ENST00000553039 FAM47BQ8NA70 645 aa4.57□□□□□ -1.68
CKAP4-203ENST00000553039 FNDC9Q8TBE3 224 aa4.57□□□□□ -1.68
CKAP4-203ENST00000553039 HTRA1Q92743 480 aa4.57□□□□□ -1.68
CKAP4-203ENST00000553039 TANKQ92844 425 aa4.57□□□□□ -1.68
CKAP4-203ENST00000553039 RIT1Q92963 219 aa4.57□□□□□ -1.68
CKAP4-203ENST00000553039 TMCO6Q96DC7 493 aa4.57□□□□□ -1.68
CKAP4-203ENST00000553039 FAHD2AQ96GK7 314 aa4.57□□□□□ -1.68
CKAP4-203ENST00000553039 RSRC1Q96IZ7 334 aaKnown RBP4.57□□□□□ -1.68
CKAP4-203ENST00000553039 SNX22Q96L94 193 aa4.57□□□□□ -1.68
CKAP4-203ENST00000553039 BIRC8Q96P09 236 aa4.57□□□□□ -1.68
CKAP4-203ENST00000553039 SOX7Q9BT81 388 aa4.57□□□□□ -1.68
CKAP4-203ENST00000553039 BTBD2Q9BX70 525 aa4.57□□□□□ -1.68
CKAP4-203ENST00000553039 RSPO3Q9BXY4 272 aaPredicted RBP4.57□□□□□ -1.68
CKAP4-203ENST00000553039 WWTR1Q9GZV5 400 aa4.57□□□□□ -1.68
CKAP4-203ENST00000553039 CCDC68Q9H2F9 335 aa4.57□□□□□ -1.68
CKAP4-203ENST00000553039 COPS7BQ9H9Q2 264 aaPredicted RBP4.57□□□□□ -1.68
CKAP4-203ENST00000553039 PARVBQ9HBI1 364 aa4.57□□□□□ -1.68
CKAP4-203ENST00000553039 LYRM4Q9HD34 91 aa4.57□□□□□ -1.68
CKAP4-203ENST00000553039 FBXO34Q9NWN3 711 aa4.57□□□□□ -1.68
CKAP4-203ENST00000553039 MS4A12Q9NXJ0 267 aa4.57□□□□□ -1.68
CKAP4-203ENST00000553039 PAQR5Q9NXK6 330 aaPredicted RBP4.57□□□□□ -1.68
CKAP4-203ENST00000553039 KLRF1Q9NZS2 232 aa4.57□□□□□ -1.68
CKAP4-203ENST00000553039 XPR1Q9UBH6 696 aa4.57□□□□□ -1.68
CKAP4-203ENST00000553039 SLC2A6Q9UGQ3 507 aa4.57□□□□□ -1.68
CKAP4-203ENST00000553039 MED16Q9Y2X0 877 aa4.57□□□□□ -1.68
CKAP4-203ENST00000553039 KCNE2Q9Y6J6 123 aa4.57□□□□□ -1.68
CKAP4-203ENST00000553039 YLPM1P49750 1951 aaKnown RBP4.56□□□□□ -1.68
CKAP4-203ENST00000553039 VWFP04275 2813 aa4.56□□□□□ -1.68
CKAP4-203ENST00000553039 A0A087X0M5 115 aa4.56□□□□□ -1.68
CKAP4-203ENST00000553039 A0A087X0T9 212 aa4.56□□□□□ -1.68
CKAP4-203ENST00000553039 NPIPA5A0A0B4J1W7 369 aa4.56□□□□□ -1.68
CKAP4-203ENST00000553039 A0A1B0GX30 115 aa4.56□□□□□ -1.68
CKAP4-203ENST00000553039 ANKDD1BA6NHY2 528 aa4.56□□□□□ -1.68
CKAP4-203ENST00000553039 A6NLC8 198 aa4.56□□□□□ -1.68
CKAP4-203ENST00000553039 E7EQL1 145 aa4.56□□□□□ -1.68
CKAP4-203ENST00000553039 NPIPA7E9PJI5 369 aa4.56□□□□□ -1.68
CKAP4-203ENST00000553039 AP3B1O00203 1094 aa4.56□□□□□ -1.68
CKAP4-203ENST00000553039 ABCD4O14678 606 aa4.56□□□□□ -1.68
CKAP4-203ENST00000553039 ERI3O43414 337 aaKnown RBP4.56□□□□□ -1.68
CKAP4-203ENST00000553039 SPOPO43791 374 aa4.56□□□□□ -1.68
CKAP4-203ENST00000553039 ZIC3O60481 467 aa4.56□□□□□ -1.68
CKAP4-203ENST00000553039 MFAP3LO75121 409 aa4.56□□□□□ -1.68
CKAP4-203ENST00000553039 NIPSNAP2O75323 286 aa4.56□□□□□ -1.68
CKAP4-203ENST00000553039 PRKRAO75569 313 aaKnown RBP4.56□□□□□ -1.68
CKAP4-203ENST00000553039 MT-ND5P03915 603 aa4.56□□□□□ -1.68
CKAP4-203ENST00000553039 GYPCP04921 128 aa4.56□□□□□ -1.68
CKAP4-203ENST00000553039 ERCC1P07992 297 aaPredicted RBP4.56□□□□□ -1.68
CKAP4-203ENST00000553039 ABCB1P08183 1280 aaPredicted RBP4.56□□□□□ -1.68
CKAP4-203ENST00000553039 FAM228BP0C875 321 aa4.56□□□□□ -1.68
CKAP4-203ENST00000553039 NPIPA8P0DM63 369 aa4.56□□□□□ -1.68
CKAP4-203ENST00000553039 GALNSP34059 522 aa4.56□□□□□ -1.68
CKAP4-203ENST00000553039 HNRNPFP52597 415 aaKnown RBP4.56□□□□□ -1.68
CKAP4-203ENST00000553039 PLA2G16P53816 162 aa4.56□□□□□ -1.68
CKAP4-203ENST00000553039 CDH15P55291 814 aa4.56□□□□□ -1.68
CKAP4-203ENST00000553039 DSCR4P56555 118 aaPredicted RBP4.56□□□□□ -1.68
CKAP4-203ENST00000553039 CLDN15P56746 228 aa4.56□□□□□ -1.68
CKAP4-203ENST00000553039 SLC37A1P57057 533 aa4.56□□□□□ -1.68
CKAP4-203ENST00000553039 UBA52P62987 128 aaKnown RBP4.56□□□□□ -1.68
CKAP4-203ENST00000553039 PLIN5Q00G26 463 aa4.56□□□□□ -1.68
CKAP4-203ENST00000553039 ITGADQ13349 1161 aa4.56□□□□□ -1.68
CKAP4-203ENST00000553039 PPA1Q15181 289 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms