RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, human

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB3-223	ENST00000552480	LINC00471	Q8N535	108 aa		11.74	□□□□□ -0.53
CACNB3-223	ENST00000552480	OIT3	Q8WWZ8	545 aa		11.74	□□□□□ -0.53
CACNB3-223	ENST00000552480	DIO2	Q92813	273 aa		11.74	□□□□□ -0.53
CACNB3-223	ENST00000552480	PMEPA1	Q969W9	287 aa		11.74	□□□□□ -0.53
CACNB3-223	ENST00000552480	ADIPOR1	Q96A54	375 aa		11.74	□□□□□ -0.53
CACNB3-223	ENST00000552480	LIN37	Q96GY3	246 aa	Predicted RBP	11.74	□□□□□ -0.53
CACNB3-223	ENST00000552480	LCOR	Q96JN0	433 aa	Predicted RBP	11.74	□□□□□ -0.53
CACNB3-223	ENST00000552480	FEV	Q99581	238 aa		11.74	□□□□□ -0.53
CACNB3-223	ENST00000552480	ZPBP	Q9BS86	351 aa		11.74	□□□□□ -0.53
CACNB3-223	ENST00000552480	FUZ	Q9BT04	418 aa		11.74	□□□□□ -0.53
CACNB3-223	ENST00000552480	ULBP3	Q9BZM4	244 aa		11.74	□□□□□ -0.53
CACNB3-223	ENST00000552480	RIBC2	Q9H4K1	309 aa		11.74	□□□□□ -0.53
CACNB3-223	ENST00000552480	PARD6A	Q9NPB6	346 aa		11.74	□□□□□ -0.53
CACNB3-223	ENST00000552480	C19orf25	Q9UFG5	118 aa	Predicted RBP	11.74	□□□□□ -0.53
CACNB3-223	ENST00000552480	POFUT2	Q9Y2G5	429 aa		11.74	□□□□□ -0.53
CACNB3-223	ENST00000552480	PCDHGB5	Q9Y5G0	923 aa		11.74	□□□□□ -0.53
CACNB3-223	ENST00000552480	RALGAPA1	Q6GYQ0	2036 aa		11.74	□□□□□ -0.53
CACNB3-223	ENST00000552480	C2orf92	A0A1B0GVN3	265 aa		11.73	□□□□□ -0.53
CACNB3-223	ENST00000552480	CDHR4	A6H8M9	788 aa		11.73	□□□□□ -0.53
CACNB3-223	ENST00000552480	CLDN24	A6NM45	220 aa		11.73	□□□□□ -0.53
CACNB3-223	ENST00000552480		C9J4A7	227 aa		11.73	□□□□□ -0.53
CACNB3-223	ENST00000552480	OR5F1	O95221	314 aa		11.73	□□□□□ -0.53
CACNB3-223	ENST00000552480	IL33	O95760	270 aa		11.73	□□□□□ -0.53
CACNB3-223	ENST00000552480	FUT4	P22083	530 aa		11.73	□□□□□ -0.53
CACNB3-223	ENST00000552480	CBL	P22681	906 aa		11.73	□□□□□ -0.53
CACNB3-223	ENST00000552480	LCN1	P31025	176 aa		11.73	□□□□□ -0.53
CACNB3-223	ENST00000552480	IFNA8	P32881	189 aa		11.73	□□□□□ -0.53
CACNB3-223	ENST00000552480	ZNF136	P52737	540 aa		11.73	□□□□□ -0.53
CACNB3-223	ENST00000552480	ATP12A	P54707	1039 aa		11.73	□□□□□ -0.53
CACNB3-223	ENST00000552480	TAS2R41	P59536	307 aa		11.73	□□□□□ -0.53
CACNB3-223	ENST00000552480	PSPH	P78330	225 aa		11.73	□□□□□ -0.53
CACNB3-223	ENST00000552480	MYBPC1	Q00872	1141 aa		11.73	□□□□□ -0.53
CACNB3-223	ENST00000552480	IL1RL1	Q01638	556 aa		11.73	□□□□□ -0.53
CACNB3-223	ENST00000552480	IL18R1	Q13478	541 aa		11.73	□□□□□ -0.53
CACNB3-223	ENST00000552480	BLMH	Q13867	455 aa		11.73	□□□□□ -0.53
CACNB3-223	ENST00000552480	ISX	Q2M1V0	245 aa		11.73	□□□□□ -0.53
CACNB3-223	ENST00000552480	DCAF12	Q5T6F0	453 aa		11.73	□□□□□ -0.53
CACNB3-223	ENST00000552480	HLA-DQA1	Q5Y7H0	255 aa		11.73	□□□□□ -0.53
CACNB3-223	ENST00000552480	ZNF770	Q6IQ21	691 aa	Predicted RBP	11.73	□□□□□ -0.53
CACNB3-223	ENST00000552480	PLEKHM3	Q6ZWE6	761 aa		11.73	□□□□□ -0.53
CACNB3-223	ENST00000552480	PIP4P1	Q86T03	277 aa		11.73	□□□□□ -0.53
CACNB3-223	ENST00000552480	TSPYL5	Q86VY4	417 aa	Predicted RBP	11.73	□□□□□ -0.53
CACNB3-223	ENST00000552480	GRAMD2A	Q8IUY3	354 aa		11.73	□□□□□ -0.53
CACNB3-223	ENST00000552480	CMIP	Q8IY22	773 aa		11.73	□□□□□ -0.53
CACNB3-223	ENST00000552480	NFAM1	Q8NET5	270 aa	Predicted RBP	11.73	□□□□□ -0.53
CACNB3-223	ENST00000552480	OR9Q2	Q8NGE9	314 aa		11.73	□□□□□ -0.53
CACNB3-223	ENST00000552480	MR1	Q95460	341 aa		11.73	□□□□□ -0.53
CACNB3-223	ENST00000552480	SLC35B4	Q969S0	331 aa		11.73	□□□□□ -0.53
CACNB3-223	ENST00000552480	MCHR1	Q99705	422 aa		11.73	□□□□□ -0.53
CACNB3-223	ENST00000552480	LRFN3	Q9BTN0	628 aa		11.73	□□□□□ -0.53
CACNB3-223	ENST00000552480	CRB3	Q9BUF7	120 aa		11.73	□□□□□ -0.53
CACNB3-223	ENST00000552480	GABARAPL3	Q9BY60	117 aa		11.73	□□□□□ -0.53
CACNB3-223	ENST00000552480	SEMA4C	Q9C0C4	833 aa		11.73	□□□□□ -0.53
CACNB3-223	ENST00000552480	WWTR1	Q9GZV5	400 aa		11.73	□□□□□ -0.53
CACNB3-223	ENST00000552480	HOXD1	Q9GZZ0	328 aa		11.73	□□□□□ -0.53
CACNB3-223	ENST00000552480	NXF5	Q9H1B4	397 aa	Known RBP	11.73	□□□□□ -0.53
CACNB3-223	ENST00000552480	ANKRD19P	Q9H560	264 aa		11.73	□□□□□ -0.53
CACNB3-223	ENST00000552480	ZNF696	Q9H7X3	374 aa		11.73	□□□□□ -0.53
CACNB3-223	ENST00000552480	ZNF556	Q9HAH1	456 aa		11.73	□□□□□ -0.53
CACNB3-223	ENST00000552480	PAPOLB	Q9NRJ5	636 aa	Known RBP	11.73	□□□□□ -0.53
CACNB3-223	ENST00000552480	ST6GALNAC1	Q9NSC7	600 aa	Predicted RBP	11.73	□□□□□ -0.53
CACNB3-223	ENST00000552480	MAN2C1	Q9NTJ4	1040 aa		11.73	□□□□□ -0.53
CACNB3-223	ENST00000552480	RLIM	Q9NVW2	624 aa		11.73	□□□□□ -0.53
CACNB3-223	ENST00000552480	SCOC	Q9UIL1	159 aa		11.73	□□□□□ -0.53
CACNB3-223	ENST00000552480	MRTO4	Q9UKD2	239 aa	Known RBP	11.73	□□□□□ -0.53
CACNB3-223	ENST00000552480	PPIE	Q9UNP9	301 aa	Known RBP	11.73	□□□□□ -0.53
CACNB3-223	ENST00000552480	MGAT4B	Q9UQ53	548 aa		11.73	□□□□□ -0.53
CACNB3-223	ENST00000552480	LOC100130705	A0A1B0GUX0	176 aa		11.72	□□□□□ -0.53
CACNB3-223	ENST00000552480	SH3PXD2B	A1X283	911 aa		11.72	□□□□□ -0.53
CACNB3-223	ENST00000552480	CPSF4L	A6NMK7	179 aa	Known RBP	11.72	□□□□□ -0.53
CACNB3-223	ENST00000552480		E9PQ18	207 aa		11.72	□□□□□ -0.53
CACNB3-223	ENST00000552480	BCKDK	O14874	412 aa		11.72	□□□□□ -0.53
CACNB3-223	ENST00000552480	T	O15178	435 aa		11.72	□□□□□ -0.53
CACNB3-223	ENST00000552480	FOXD2	O60548	495 aa	Predicted RBP	11.72	□□□□□ -0.53
CACNB3-223	ENST00000552480	TPST2	O60704	377 aa		11.72	□□□□□ -0.53
CACNB3-223	ENST00000552480	FMO6P	O60774	539 aa		11.72	□□□□□ -0.53
CACNB3-223	ENST00000552480	CS	O75390	466 aa	Known RBP	11.72	□□□□□ -0.53
CACNB3-223	ENST00000552480	CLIC3	O95833	236 aa		11.72	□□□□□ -0.53
CACNB3-223	ENST00000552480	MT-CO3	P00414	261 aa		11.72	□□□□□ -0.53
CACNB3-223	ENST00000552480	ADA	P00813	363 aa		11.72	□□□□□ -0.53
CACNB3-223	ENST00000552480	ITIH1	P19827	911 aa		11.72	□□□□□ -0.53
CACNB3-223	ENST00000552480	ETV5	P41161	510 aa		11.72	□□□□□ -0.53
CACNB3-223	ENST00000552480	GPR143	P51810	404 aa		11.72	□□□□□ -0.53
CACNB3-223	ENST00000552480	RPS6KA3	P51812	740 aa		11.72	□□□□□ -0.53
CACNB3-223	ENST00000552480	FOXL2	P58012	376 aa		11.72	□□□□□ -0.53
CACNB3-223	ENST00000552480	ST3GAL3	Q11203	375 aa		11.72	□□□□□ -0.53
CACNB3-223	ENST00000552480	KEAP1	Q14145	624 aa		11.72	□□□□□ -0.53
CACNB3-223	ENST00000552480	FGFBP1	Q14512	234 aa		11.72	□□□□□ -0.53
CACNB3-223	ENST00000552480	TRAM2	Q15035	370 aa		11.72	□□□□□ -0.53
CACNB3-223	ENST00000552480	SEC23B	Q15437	767 aa		11.72	□□□□□ -0.53
CACNB3-223	ENST00000552480	ENTPD8	Q5MY95	495 aa		11.72	□□□□□ -0.53
CACNB3-223	ENST00000552480	TMEM154	Q6P9G4	183 aa		11.72	□□□□□ -0.53
CACNB3-223	ENST00000552480	ZNF517	Q6ZMY9	492 aa	Predicted RBP	11.72	□□□□□ -0.53
CACNB3-223	ENST00000552480	RAB11FIP2	Q7L804	512 aa		11.72	□□□□□ -0.53
CACNB3-223	ENST00000552480	CPEB2	Q7Z5Q1	589 aa	Known RBP	11.72	□□□□□ -0.53
CACNB3-223	ENST00000552480	C8orf59	Q8N0T1	100 aa	Predicted RBP	11.72	□□□□□ -0.53
CACNB3-223	ENST00000552480	ZNF441	Q8N8Z8	693 aa		11.72	□□□□□ -0.53
CACNB3-223	ENST00000552480	AQP11	Q8NBQ7	271 aa		11.72	□□□□□ -0.53
CACNB3-223	ENST00000552480	C17orf47	Q8NEP4	570 aa		11.72	□□□□□ -0.53
CACNB3-223	ENST00000552480	B3GNT7	Q8NFL0	401 aa		11.72	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms