RNA–Protein interactions for RNA: ENST00000552215.5

CHPT1-208, Transcript of choline phosphotransferase 1, humanhuman

TSL 1 (best)

Gene CHPT1, Length 4,342 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPT1-208ENST00000552215 LSM11P83369 360 aaKnown RBP eCLIP7.56□□□□□ -1.2
CHPT1-208ENST00000552215 PCDH1Q08174 1060 aa7.56□□□□□ -1.2
CHPT1-208ENST00000552215 ELAVL1Q15717 326 aaKnown RBP7.56□□□□□ -1.2
CHPT1-208ENST00000552215 SNAPC1Q16533 368 aa7.56□□□□□ -1.2
CHPT1-208ENST00000552215 C9orf135Q5VTT2 229 aa7.56□□□□□ -1.2
CHPT1-208ENST00000552215 OVCH1Q7RTY7 1134 aa7.56□□□□□ -1.2
CHPT1-208ENST00000552215 DPP10Q8N608 796 aa7.56□□□□□ -1.2
CHPT1-208ENST00000552215 ZNF527Q8NB42 609 aa7.56□□□□□ -1.2
CHPT1-208ENST00000552215 CYB561A3Q8NBI2 242 aa7.56□□□□□ -1.2
CHPT1-208ENST00000552215 OR5L2Q8NGL0 311 aa7.56□□□□□ -1.2
CHPT1-208ENST00000552215 GEMIN6Q8WXD5 167 aaKnown RBP7.56□□□□□ -1.2
CHPT1-208ENST00000552215 SDF2Q99470 211 aa7.56□□□□□ -1.2
CHPT1-208ENST00000552215 ZNF184Q99676 751 aaPredicted RBP7.56□□□□□ -1.2
CHPT1-208ENST00000552215 DGCR6LQ9BY27 220 aa7.56□□□□□ -1.2
CHPT1-208ENST00000552215 SH3D21A4FU49 640 aa7.56□□□□□ -1.2
CHPT1-208ENST00000552215 H0YIG0 161 aa7.56□□□□□ -1.2
CHPT1-208ENST00000552215 TGFBR3LH3BV60 316 aa7.56□□□□□ -1.2
CHPT1-208ENST00000552215 SOCS2O14508 198 aa7.56□□□□□ -1.2
CHPT1-208ENST00000552215 UTS2O95399 124 aa7.56□□□□□ -1.2
CHPT1-208ENST00000552215 IGFBP1P08833 259 aaPredicted RBP7.56□□□□□ -1.2
CHPT1-208ENST00000552215 EIF1AXP47813 144 aaKnown RBP7.56□□□□□ -1.2
CHPT1-208ENST00000552215 LSM3P62310 102 aaKnown RBP7.56□□□□□ -1.2
CHPT1-208ENST00000552215 MAPK14Q16539 360 aa7.56□□□□□ -1.2
CHPT1-208ENST00000552215 WLSQ5T9L3 541 aa7.56□□□□□ -1.2
CHPT1-208ENST00000552215 PTOV1Q86YD1 416 aa7.56□□□□□ -1.2
CHPT1-208ENST00000552215 LILRA2Q8N149 483 aa7.56□□□□□ -1.2
CHPT1-208ENST00000552215 OR10G3Q8NGC4 313 aa7.56□□□□□ -1.2
CHPT1-208ENST00000552215 TSPEARQ8WU66 669 aa7.56□□□□□ -1.2
CHPT1-208ENST00000552215 LCORQ96JN0 433 aaPredicted RBP7.56□□□□□ -1.2
CHPT1-208ENST00000552215 DPH1Q9BZG8 443 aa7.56□□□□□ -1.2
CHPT1-208ENST00000552215 DEFB127Q9H1M4 99 aa7.56□□□□□ -1.2
CHPT1-208ENST00000552215 DSN1Q9H410 356 aa7.56□□□□□ -1.2
CHPT1-208ENST00000552215 MTHFD2LQ9H903 347 aaPredicted RBP7.56□□□□□ -1.2
CHPT1-208ENST00000552215 TCFL5Q9UL49 500 aa7.56□□□□□ -1.2
CHPT1-208ENST00000552215 MGAQ8IWI9 3026 aa7.56□□□□□ -1.2
CHPT1-208ENST00000552215 KCNK2O95069 426 aa7.56□□□□□ -1.2
CHPT1-208ENST00000552215 GPIP06744 558 aa7.56□□□□□ -1.2
CHPT1-208ENST00000552215 GSTM2P28161 218 aa7.56□□□□□ -1.2
CHPT1-208ENST00000552215 CAPZA2P47755 286 aa7.56□□□□□ -1.2
CHPT1-208ENST00000552215 CDH15P55291 814 aa7.56□□□□□ -1.2
CHPT1-208ENST00000552215 TRA2BP62995 288 aaKnown RBP7.56□□□□□ -1.2
CHPT1-208ENST00000552215 MADCAM1Q13477 382 aa7.56□□□□□ -1.2
CHPT1-208ENST00000552215 IL11RAQ14626 422 aa7.56□□□□□ -1.2
CHPT1-208ENST00000552215 TMEM154Q6P9G4 183 aa7.56□□□□□ -1.2
CHPT1-208ENST00000552215 ADGRG5Q8IZF4 528 aa7.56□□□□□ -1.2
CHPT1-208ENST00000552215 SLC5A8Q8N695 610 aa7.56□□□□□ -1.2
CHPT1-208ENST00000552215 NEURL3Q96EH8 262 aa7.56□□□□□ -1.2
CHPT1-208ENST00000552215 ZNF578Q96N58 590 aaPredicted RBP7.56□□□□□ -1.2
CHPT1-208ENST00000552215 BARD1Q99728 777 aaKnown RBP7.56□□□□□ -1.2
CHPT1-208ENST00000552215 ZNF385DQ9H6B1 395 aa7.56□□□□□ -1.2
CHPT1-208ENST00000552215 SIRT3Q9NTG7 399 aaPredicted RBP7.56□□□□□ -1.2
CHPT1-208ENST00000552215 GPR55Q9Y2T6 319 aaPredicted RBP7.56□□□□□ -1.2
CHPT1-208ENST00000552215 MED13Q9UHV7 2174 aa7.55□□□□□ -1.2
CHPT1-208ENST00000552215 MGRN1O60291 552 aa7.55□□□□□ -1.2
CHPT1-208ENST00000552215 TNFRSF21O75509 655 aa7.55□□□□□ -1.2
CHPT1-208ENST00000552215 GP1BBP13224 206 aa7.55□□□□□ -1.2
CHPT1-208ENST00000552215 RNF4P78317 190 aa7.55□□□□□ -1.2
CHPT1-208ENST00000552215 CBLN3Q6UW01 205 aa7.55□□□□□ -1.2
CHPT1-208ENST00000552215 BMP8AQ7Z5Y6 402 aa7.55□□□□□ -1.2
CHPT1-208ENST00000552215 LACC1Q8IV20 430 aa7.55□□□□□ -1.2
CHPT1-208ENST00000552215 BCORP1Q8N888 145 aa7.55□□□□□ -1.2
CHPT1-208ENST00000552215 OR6K6Q8NGW6 343 aa7.55□□□□□ -1.2
CHPT1-208ENST00000552215 TEX12Q9BXU0 123 aa7.55□□□□□ -1.2
CHPT1-208ENST00000552215 TRIM2Q9C040 744 aa7.55□□□□□ -1.2
CHPT1-208ENST00000552215 OR11A1Q9GZK7 315 aa7.55□□□□□ -1.2
CHPT1-208ENST00000552215 C19orf53Q9UNZ5 99 aaPredicted RBP7.55□□□□□ -1.2
CHPT1-208ENST00000552215 NPFFR2Q9Y5X5 522 aa7.55□□□□□ -1.2
CHPT1-208ENST00000552215 TRAV27A0A087WT01 109 aa7.55□□□□□ -1.2
CHPT1-208ENST00000552215 FAM20BO75063 409 aa7.55□□□□□ -1.2
CHPT1-208ENST00000552215 CBX7O95931 251 aa7.55□□□□□ -1.2
CHPT1-208ENST00000552215 F8A1P23610 371 aa7.55□□□□□ -1.2
CHPT1-208ENST00000552215 GDF1P27539 372 aa7.55□□□□□ -1.2
CHPT1-208ENST00000552215 GRPRP30550 384 aa7.55□□□□□ -1.2
CHPT1-208ENST00000552215 SOX3P41225 446 aa7.55□□□□□ -1.2
CHPT1-208ENST00000552215 STT3AP46977 705 aa7.55□□□□□ -1.2
CHPT1-208ENST00000552215 EMDP50402 254 aa7.55□□□□□ -1.2
CHPT1-208ENST00000552215 ZNF41P51814 821 aaPredicted RBP7.55□□□□□ -1.2
CHPT1-208ENST00000552215 SELENOWP63302 87 aa7.55□□□□□ -1.2
CHPT1-208ENST00000552215 NHLH1Q02575 133 aa7.55□□□□□ -1.2
CHPT1-208ENST00000552215 ZNF528Q3MIS6 628 aa7.55□□□□□ -1.2
CHPT1-208ENST00000552215 SLC36A3Q495N2 470 aa7.55□□□□□ -1.2
CHPT1-208ENST00000552215 LRRC69Q6ZNQ3 347 aa7.55□□□□□ -1.2
CHPT1-208ENST00000552215 SLITRK4Q8IW52 837 aa7.55□□□□□ -1.2
CHPT1-208ENST00000552215 ZSCAN1Q8NBB4 408 aa7.55□□□□□ -1.2
CHPT1-208ENST00000552215 B3GNT7Q8NFL0 401 aa7.55□□□□□ -1.2
CHPT1-208ENST00000552215 GPR119Q8TDV5 335 aa7.55□□□□□ -1.2
CHPT1-208ENST00000552215 G6PC3Q9BUM1 346 aa7.55□□□□□ -1.2
CHPT1-208ENST00000552215 NMNAT1Q9HAN9 279 aaPredicted RBP7.55□□□□□ -1.2
CHPT1-208ENST00000552215 RIMS3Q9UJD0 308 aa7.55□□□□□ -1.2
CHPT1-208ENST00000552215 KCND3Q9UK17 655 aa7.55□□□□□ -1.2
CHPT1-208ENST00000552215 RALYQ9UKM9 306 aaKnown RBP7.55□□□□□ -1.2
CHPT1-208ENST00000552215 MED13LQ71F56 2210 aa7.55□□□□□ -1.2
CHPT1-208ENST00000552215 LY6G6EA0A0G2JKS1 128 aa7.55□□□□□ -1.2
CHPT1-208ENST00000552215 TRBV4-1A0A0J9YWV2 114 aa7.55□□□□□ -1.2
CHPT1-208ENST00000552215 AQP12BA6NM10 295 aa7.55□□□□□ -1.2
CHPT1-208ENST00000552215 TMX2-CTNND1H3BSU7 103 aa7.55□□□□□ -1.2
CHPT1-208ENST00000552215 IGHV3-9P01782 118 aa7.55□□□□□ -1.2
CHPT1-208ENST00000552215 HSD17B1P14061 328 aa7.55□□□□□ -1.2
CHPT1-208ENST00000552215 GK3PQ14409 553 aa7.55□□□□□ -1.2
CHPT1-208ENST00000552215 ODF4Q2M2E3 257 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms