RNA–Protein interactions for RNA: ENST00000550893.2

SCAF11-214, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 507 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-214ENST00000550893 PPIEQ9UNP9 301 aaKnown RBP4.49□□□□□ -1.69
SCAF11-214ENST00000550893 SLC22A14Q9Y267 594 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 NAALAD2Q9Y3Q0 740 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 COPG1Q9Y678 874 aaKnown RBP4.49□□□□□ -1.69
SCAF11-214ENST00000550893 SLC22A7Q9Y694 548 aa4.49□□□□□ -1.69
SCAF11-214ENST00000550893 INTS1Q8N201 2190 aaKnown RBP4.48□□□□□ -1.69
SCAF11-214ENST00000550893 MED12LQ86YW9 2145 aa4.48□□□□□ -1.69
SCAF11-214ENST00000550893 LRIT2A6NDA9 550 aa4.48□□□□□ -1.69
SCAF11-214ENST00000550893 NCF1BA6NI72 391 aaPredicted RBP4.48□□□□□ -1.69
SCAF11-214ENST00000550893 WASHC1A8K0Z3 465 aa4.48□□□□□ -1.69
SCAF11-214ENST00000550893 NCF1CA8MVU1 366 aaPredicted RBP4.48□□□□□ -1.69
SCAF11-214ENST00000550893 MCIDASD6RGH6 385 aa4.48□□□□□ -1.69
SCAF11-214ENST00000550893 RTCAO00442 366 aaKnown RBP4.48□□□□□ -1.69
SCAF11-214ENST00000550893 OR7A17O14581 309 aa4.48□□□□□ -1.69
SCAF11-214ENST00000550893 NDUFS4O43181 175 aa4.48□□□□□ -1.69
SCAF11-214ENST00000550893 CHST10O43529 356 aa4.48□□□□□ -1.69
SCAF11-214ENST00000550893 KERAO60938 352 aa4.48□□□□□ -1.69
SCAF11-214ENST00000550893 PRKRAO75569 313 aaKnown RBP4.48□□□□□ -1.69
SCAF11-214ENST00000550893 CDC123O75794 336 aaPredicted RBP4.48□□□□□ -1.69
SCAF11-214ENST00000550893 SIX3O95343 332 aaPredicted RBP4.48□□□□□ -1.69
SCAF11-214ENST00000550893 CCDC166P0CW27 439 aa4.48□□□□□ -1.69
SCAF11-214ENST00000550893 SFTPCP11686 197 aa4.48□□□□□ -1.69
SCAF11-214ENST00000550893 NCF1P14598 390 aaPredicted RBP4.48□□□□□ -1.69
SCAF11-214ENST00000550893 MAOAP21397 527 aa4.48□□□□□ -1.69
SCAF11-214ENST00000550893 AHRP35869 848 aa4.48□□□□□ -1.69
SCAF11-214ENST00000550893 HSD17B2P37059 387 aa4.48□□□□□ -1.69
SCAF11-214ENST00000550893 GP5P40197 560 aa4.48□□□□□ -1.69
SCAF11-214ENST00000550893 CASP2P42575 452 aa4.48□□□□□ -1.69
SCAF11-214ENST00000550893 TSFMP43897 325 aaKnown RBP4.48□□□□□ -1.69
SCAF11-214ENST00000550893 TNFSF10P50591 281 aa4.48□□□□□ -1.69
SCAF11-214ENST00000550893 SLC26A5P58743 744 aa4.48□□□□□ -1.69
SCAF11-214ENST00000550893 RAB10P61026 200 aa4.48□□□□□ -1.69
SCAF11-214ENST00000550893 IGLV3-21P80748 117 aaPredicted RBP4.48□□□□□ -1.69
SCAF11-214ENST00000550893 PMPCAQ10713 525 aa4.48□□□□□ -1.69
SCAF11-214ENST00000550893 AIMP2Q13155 320 aaKnown RBP4.48□□□□□ -1.69
SCAF11-214ENST00000550893 DOC2AQ14183 400 aa4.48□□□□□ -1.69
SCAF11-214ENST00000550893 DEFB134Q4QY38 66 aa4.48□□□□□ -1.69
SCAF11-214ENST00000550893 ARL13AQ5H913 290 aaPredicted RBP4.48□□□□□ -1.69
SCAF11-214ENST00000550893 ENTPD8Q5MY95 495 aa4.48□□□□□ -1.69
SCAF11-214ENST00000550893 CES4AQ5XG92 561 aa4.48□□□□□ -1.69
SCAF11-214ENST00000550893 CAPN13Q6MZZ7 669 aaPredicted RBP4.48□□□□□ -1.69
SCAF11-214ENST00000550893 LRRC8EQ6NSJ5 796 aa4.48□□□□□ -1.69
SCAF11-214ENST00000550893 C16orf47Q6ZP98 133 aaPredicted RBP4.48□□□□□ -1.69
SCAF11-214ENST00000550893 NCCRP1Q6ZVX7 275 aaPredicted RBP4.48□□□□□ -1.69
SCAF11-214ENST00000550893 ADAMTSL2Q86TH1 951 aa4.48□□□□□ -1.69
SCAF11-214ENST00000550893 C17orf64Q86WR6 236 aa4.48□□□□□ -1.69
SCAF11-214ENST00000550893 CRLF3Q8IUI8 442 aa4.48□□□□□ -1.69
SCAF11-214ENST00000550893 TTC29Q8NA56 475 aaPredicted RBP4.48□□□□□ -1.69
SCAF11-214ENST00000550893 OR51Q1Q8NH59 317 aa4.48□□□□□ -1.69
SCAF11-214ENST00000550893 WDR20Q8TBZ3 569 aa4.48□□□□□ -1.69
SCAF11-214ENST00000550893 ELP5Q8TE02 316 aa4.48□□□□□ -1.69
SCAF11-214ENST00000550893 ZNF473Q8WTR7 871 aaKnown RBP4.48□□□□□ -1.69
SCAF11-214ENST00000550893 SLC44A1Q8WWI5 657 aa4.48□□□□□ -1.69
SCAF11-214ENST00000550893 NXNL1Q96CM4 212 aa4.48□□□□□ -1.69
SCAF11-214ENST00000550893 MMABQ96EY8 250 aaPredicted RBP4.48□□□□□ -1.69
SCAF11-214ENST00000550893 SCMH1Q96GD3 660 aa4.48□□□□□ -1.69
SCAF11-214ENST00000550893 FOPNLQ96NB1 174 aa4.48□□□□□ -1.69
SCAF11-214ENST00000550893 RUNDC3BQ96NL0 473 aa4.48□□□□□ -1.69
SCAF11-214ENST00000550893 CYTH2Q99418 400 aa4.48□□□□□ -1.69
SCAF11-214ENST00000550893 CPNE1Q99829 537 aa4.48□□□□□ -1.69
SCAF11-214ENST00000550893 LHPPQ9H008 270 aa4.48□□□□□ -1.69
SCAF11-214ENST00000550893 RHBGQ9H310 441 aa4.48□□□□□ -1.69
SCAF11-214ENST00000550893 ALG9Q9H6U8 611 aa4.48□□□□□ -1.69
SCAF11-214ENST00000550893 MKKSQ9NPJ1 570 aaPredicted RBP4.48□□□□□ -1.69
SCAF11-214ENST00000550893 TXLNGQ9NUQ3 528 aa4.48□□□□□ -1.69
SCAF11-214ENST00000550893 ABCF3Q9NUQ8 709 aa4.48□□□□□ -1.69
SCAF11-214ENST00000550893 C14orf105Q9NVL8 296 aa4.48□□□□□ -1.69
SCAF11-214ENST00000550893 ARL15Q9NXU5 204 aa4.48□□□□□ -1.69
SCAF11-214ENST00000550893 C5AR2Q9P296 337 aa4.48□□□□□ -1.69
SCAF11-214ENST00000550893 CTNNAL1Q9UBT7 734 aa4.48□□□□□ -1.69
SCAF11-214ENST00000550893 ZNF282Q9UDV7 671 aaPredicted RBP4.48□□□□□ -1.69
SCAF11-214ENST00000550893 NXT1Q9UKK6 140 aaKnown RBP4.48□□□□□ -1.69
SCAF11-214ENST00000550893 PADI2Q9Y2J8 665 aa4.48□□□□□ -1.69
SCAF11-214ENST00000550893 ANKHD1Q8IWZ3 2542 aaKnown RBP4.48□□□□□ -1.69
SCAF11-214ENST00000550893 CCDC168Q8NDH2 2452 aa4.48□□□□□ -1.69
SCAF11-214ENST00000550893 PRR14LQ5THK1 2151 aa4.47□□□□□ -1.69
SCAF11-214ENST00000550893 ITPR3Q14573 2671 aa4.47□□□□□ -1.69
SCAF11-214ENST00000550893 PINLYPA6NC86 204 aa4.47□□□□□ -1.69
SCAF11-214ENST00000550893 ASPDHA6ND91 283 aa4.47□□□□□ -1.69
SCAF11-214ENST00000550893 AGAP5A6NIR3 686 aa4.47□□□□□ -1.69
SCAF11-214ENST00000550893 MAGEB17A8MXT2 336 aa4.47□□□□□ -1.69
SCAF11-214ENST00000550893 GTPBP1O00178 669 aaKnown RBP4.47□□□□□ -1.69
SCAF11-214ENST00000550893 NDC80O14777 642 aa4.47□□□□□ -1.69
SCAF11-214ENST00000550893 OR1F1O43749 312 aa4.47□□□□□ -1.69
SCAF11-214ENST00000550893 EEDO75530 441 aaKnown RBP4.47□□□□□ -1.69
SCAF11-214ENST00000550893 CCNDBP1O95273 360 aa4.47□□□□□ -1.69
SCAF11-214ENST00000550893 NADKO95544 446 aaPredicted RBP4.47□□□□□ -1.69
SCAF11-214ENST00000550893 DDAH2O95865 285 aa4.47□□□□□ -1.69
SCAF11-214ENST00000550893 WDPCPO95876 746 aa4.47□□□□□ -1.69
SCAF11-214ENST00000550893 SERPINA7P05543 415 aa4.47□□□□□ -1.69
SCAF11-214ENST00000550893 C2P06681 752 aa4.47□□□□□ -1.69
SCAF11-214ENST00000550893 FHP07954 510 aa4.47□□□□□ -1.69
SCAF11-214ENST00000550893 SERPINA6P08185 405 aa4.47□□□□□ -1.69
SCAF11-214ENST00000550893 CYC1P08574 325 aa4.47□□□□□ -1.69
SCAF11-214ENST00000550893 RPS17P08708 135 aaKnown RBP4.47□□□□□ -1.69
SCAF11-214ENST00000550893 T-ENOLP0DO92 83 aa4.47□□□□□ -1.69
SCAF11-214ENST00000550893 ALOX12P18054 663 aa4.47□□□□□ -1.69
SCAF11-214ENST00000550893 SAT1P21673 171 aa4.47□□□□□ -1.69
SCAF11-214ENST00000550893 SERPINB3P29508 390 aa4.47□□□□□ -1.69
SCAF11-214ENST00000550893 RGS4P49798 205 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms