RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 GPR50Q13585 617 aa8.33□□□□□ -1.08
TMEM116-209ENST00000550020 FZD2Q14332 565 aa8.33□□□□□ -1.08
TMEM116-209ENST00000550020 GAS6Q14393 721 aa8.33□□□□□ -1.08
TMEM116-209ENST00000550020 SSX1Q16384 188 aa8.33□□□□□ -1.08
TMEM116-209ENST00000550020 PRICKLE4Q2TBC4 344 aa8.33□□□□□ -1.08
TMEM116-209ENST00000550020 PLK5Q496M5 336 aa8.33□□□□□ -1.08
TMEM116-209ENST00000550020 TCTE1Q5JU00 501 aa8.33□□□□□ -1.08
TMEM116-209ENST00000550020 PERM1Q5SV97 790 aa8.33□□□□□ -1.08
TMEM116-209ENST00000550020 AGAP7PQ5VUJ5 663 aa8.33□□□□□ -1.08
TMEM116-209ENST00000550020 ACSM5Q6NUN0 579 aa8.33□□□□□ -1.08
TMEM116-209ENST00000550020 HSDL2Q6YN16 418 aa8.33□□□□□ -1.08
TMEM116-209ENST00000550020 ZNF550Q7Z398 422 aa8.33□□□□□ -1.08
TMEM116-209ENST00000550020 BMP8AQ7Z5Y6 402 aa8.33□□□□□ -1.08
TMEM116-209ENST00000550020 COMTD1Q86VU5 262 aa8.33□□□□□ -1.08
TMEM116-209ENST00000550020 KIF18BQ86Y91 864 aa8.33□□□□□ -1.08
TMEM116-209ENST00000550020 PHC2Q8IXK0 858 aa8.33□□□□□ -1.08
TMEM116-209ENST00000550020 GALNT12Q8IXK2 581 aa8.33□□□□□ -1.08
TMEM116-209ENST00000550020 NRMQ8IXM6 262 aa8.33□□□□□ -1.08
TMEM116-209ENST00000550020 ZNF440Q8IYI8 595 aa8.33□□□□□ -1.08
TMEM116-209ENST00000550020 OR4N4Q8N0Y3 316 aa8.33□□□□□ -1.08
TMEM116-209ENST00000550020 CLIP4Q8N3C7 705 aa8.33□□□□□ -1.08
TMEM116-209ENST00000550020 C19orf47Q8N9M1 422 aaKnown RBP8.33□□□□□ -1.08
TMEM116-209ENST00000550020 POGLUT1Q8NBL1 392 aa8.33□□□□□ -1.08
TMEM116-209ENST00000550020 TSTD1Q8NFU3 115 aa8.33□□□□□ -1.08
TMEM116-209ENST00000550020 TMEM239Q8WW34 195 aa8.33□□□□□ -1.08
TMEM116-209ENST00000550020 TMCO6Q96DC7 493 aa8.33□□□□□ -1.08
TMEM116-209ENST00000550020 MRPL48Q96GC5 212 aaKnown RBP8.33□□□□□ -1.08
TMEM116-209ENST00000550020 TOE1Q96GM8 510 aaKnown RBP8.33□□□□□ -1.08
TMEM116-209ENST00000550020 RBM18Q96H35 190 aaKnown RBP8.33□□□□□ -1.08
TMEM116-209ENST00000550020 FCRL4Q96PJ5 515 aa8.33□□□□□ -1.08
TMEM116-209ENST00000550020 GDF15Q99988 308 aa8.33□□□□□ -1.08
TMEM116-209ENST00000550020 WFDC6Q9BQY6 131 aa8.33□□□□□ -1.08
TMEM116-209ENST00000550020 LMF2Q9BU23 707 aaKnown RBP8.33□□□□□ -1.08
TMEM116-209ENST00000550020 QRSL1Q9H0R6 528 aaKnown RBP8.33□□□□□ -1.08
TMEM116-209ENST00000550020 SMURF1Q9HCE7 757 aa8.33□□□□□ -1.08
TMEM116-209ENST00000550020 CTPS2Q9NRF8 586 aa8.33□□□□□ -1.08
TMEM116-209ENST00000550020 GPR27Q9NS67 375 aa8.33□□□□□ -1.08
TMEM116-209ENST00000550020 WSB2Q9NYS7 404 aaPredicted RBP8.33□□□□□ -1.08
TMEM116-209ENST00000550020 TAS2R16Q9NYV7 291 aa8.33□□□□□ -1.08
TMEM116-209ENST00000550020 MAT2BQ9NZL9 334 aa8.33□□□□□ -1.08
TMEM116-209ENST00000550020 CNIH4Q9P003 139 aa8.33□□□□□ -1.08
TMEM116-209ENST00000550020 DOLKQ9UPQ8 538 aa8.33□□□□□ -1.08
TMEM116-209ENST00000550020 TRAPPC4Q9Y296 219 aa8.33□□□□□ -1.08
TMEM116-209ENST00000550020 EXOGQ9Y2C4 368 aaKnown RBP8.33□□□□□ -1.08
TMEM116-209ENST00000550020 GPR55Q9Y2T6 319 aaPredicted RBP8.33□□□□□ -1.08
TMEM116-209ENST00000550020 SPIN1Q9Y657 262 aaPredicted RBP8.33□□□□□ -1.08
TMEM116-209ENST00000550020 KIAA0100Q14667 2235 aaKnown RBP8.33□□□□□ -1.08
TMEM116-209ENST00000550020 KRBA1A5PL33 1030 aa8.32□□□□□ -1.08
TMEM116-209ENST00000550020 LILRA5A6NI73 299 aa8.32□□□□□ -1.08
TMEM116-209ENST00000550020 RIIAD1A6NNX1 92 aa8.32□□□□□ -1.08
TMEM116-209ENST00000550020 DYRK3O43781 588 aa8.32□□□□□ -1.08
TMEM116-209ENST00000550020 FGF17O60258 216 aa8.32□□□□□ -1.08
TMEM116-209ENST00000550020 PRAMEF2O60811 474 aa8.32□□□□□ -1.08
TMEM116-209ENST00000550020 CTNSO60931 367 aa8.32□□□□□ -1.08
TMEM116-209ENST00000550020 GPX5O75715 221 aa8.32□□□□□ -1.08
TMEM116-209ENST00000550020 IFNGP01579 166 aa8.32□□□□□ -1.08
TMEM116-209ENST00000550020 IGFBP1P08833 259 aaPredicted RBP8.32□□□□□ -1.08
TMEM116-209ENST00000550020 SRFP11831 508 aa8.32□□□□□ -1.08
TMEM116-209ENST00000550020 CKMT1AP12532 417 aa8.32□□□□□ -1.08
TMEM116-209ENST00000550020 GNSP15586 552 aa8.32□□□□□ -1.08
TMEM116-209ENST00000550020 CD53P19397 219 aa8.32□□□□□ -1.08
TMEM116-209ENST00000550020 FUT4P22083 530 aa8.32□□□□□ -1.08
TMEM116-209ENST00000550020 TGM1P22735 817 aa8.32□□□□□ -1.08
TMEM116-209ENST00000550020 FGF9P31371 208 aaPredicted RBP8.32□□□□□ -1.08
TMEM116-209ENST00000550020 GABRA5P31644 462 aa8.32□□□□□ -1.08
TMEM116-209ENST00000550020 GALNSP34059 522 aa8.32□□□□□ -1.08
TMEM116-209ENST00000550020 GABRA3P34903 492 aa8.32□□□□□ -1.08
TMEM116-209ENST00000550020 TRHRP34981 398 aaPredicted RBP8.32□□□□□ -1.08
TMEM116-209ENST00000550020 LTBRP36941 435 aa8.32□□□□□ -1.08
TMEM116-209ENST00000550020 SOX3P41225 446 aa8.32□□□□□ -1.08
TMEM116-209ENST00000550020 GCGRP47871 477 aa8.32□□□□□ -1.08
TMEM116-209ENST00000550020 SLC9A3P48764 834 aa8.32□□□□□ -1.08
TMEM116-209ENST00000550020 TAS2R43P59537 309 aa8.32□□□□□ -1.08
TMEM116-209ENST00000550020 POU4F2Q12837 409 aa8.32□□□□□ -1.08
TMEM116-209ENST00000550020 STX4Q12846 297 aa8.32□□□□□ -1.08
TMEM116-209ENST00000550020 SERTAD2Q14140 314 aa8.32□□□□□ -1.08
TMEM116-209ENST00000550020 FAM53BQ14153 422 aa8.32□□□□□ -1.08
TMEM116-209ENST00000550020 OR1Q1Q15612 314 aa8.32□□□□□ -1.08
TMEM116-209ENST00000550020 TRAM1Q15629 374 aa8.32□□□□□ -1.08
TMEM116-209ENST00000550020 AMZ1Q400G9 498 aa8.32□□□□□ -1.08
TMEM116-209ENST00000550020 TRMT12Q53H54 448 aaKnown RBP8.32□□□□□ -1.08
TMEM116-209ENST00000550020 MRPL2Q5T653 305 aaKnown RBP8.32□□□□□ -1.08
TMEM116-209ENST00000550020 AADACL4Q5VUY2 407 aa8.32□□□□□ -1.08
TMEM116-209ENST00000550020 TMPRSS11FQ6ZWK6 438 aa8.32□□□□□ -1.08
TMEM116-209ENST00000550020 CXXC5Q7LFL8 322 aaKnown RBP8.32□□□□□ -1.08
TMEM116-209ENST00000550020 CCDC190Q86UF4 302 aa8.32□□□□□ -1.08
TMEM116-209ENST00000550020 SLC22A16Q86VW1 577 aa8.32□□□□□ -1.08
TMEM116-209ENST00000550020 GRAMD2AQ8IUY3 354 aa8.32□□□□□ -1.08
TMEM116-209ENST00000550020 LYSMD2Q8IV50 215 aa8.32□□□□□ -1.08
TMEM116-209ENST00000550020 MCATQ8IVS2 390 aaKnown RBP8.32□□□□□ -1.08
TMEM116-209ENST00000550020 OR4N5Q8IXE1 308 aa8.32□□□□□ -1.08
TMEM116-209ENST00000550020 CARFQ8N187 725 aa8.32□□□□□ -1.08
TMEM116-209ENST00000550020 PARP16Q8N5Y8 322 aa8.32□□□□□ -1.08
TMEM116-209ENST00000550020 POC5Q8NA72 575 aa8.32□□□□□ -1.08
TMEM116-209ENST00000550020 FANK1Q8TC84 345 aa8.32□□□□□ -1.08
TMEM116-209ENST00000550020 SLC2A12Q8TD20 617 aa8.32□□□□□ -1.08
TMEM116-209ENST00000550020 HOXB13Q92826 284 aaPredicted RBP8.32□□□□□ -1.08
TMEM116-209ENST00000550020 FGF11Q92914 225 aa8.32□□□□□ -1.08
TMEM116-209ENST00000550020 CTHRC1Q96CG8 243 aa8.32□□□□□ -1.08
TMEM116-209ENST00000550020 C1GALT1C1Q96EU7 318 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms