RNA–Protein interactions for RNA: ENST00000549505.5

RAB5B-206, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 1 (best)

Gene RAB5B, Length 3,148 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-206ENST00000549505 SYT14P1Q58G82 188 aa9.26□□□□□ -0.93
RAB5B-206ENST00000549505 TUBA3EQ6PEY2 450 aa9.26□□□□□ -0.93
RAB5B-206ENST00000549505 DGAT2L6Q6ZPD8 337 aa9.26□□□□□ -0.93
RAB5B-206ENST00000549505 WDR5BQ86VZ2 330 aa9.26□□□□□ -0.93
RAB5B-206ENST00000549505 FAM160A2Q8N612 972 aaPredicted RBP9.26□□□□□ -0.93
RAB5B-206ENST00000549505 TMCO5AQ8N6Q1 288 aa9.26□□□□□ -0.93
RAB5B-206ENST00000549505 LIPHQ8WWY8 451 aa9.26□□□□□ -0.93
RAB5B-206ENST00000549505 CLIP3Q96DZ5 547 aa9.26□□□□□ -0.93
RAB5B-206ENST00000549505 ZNF582Q96NG8 517 aaPredicted RBP9.26□□□□□ -0.93
RAB5B-206ENST00000549505 MCHR1Q99705 422 aa9.26□□□□□ -0.93
RAB5B-206ENST00000549505 MAP3K3Q99759 626 aa9.26□□□□□ -0.93
RAB5B-206ENST00000549505 CCDC3Q9BQI4 270 aa9.26□□□□□ -0.93
RAB5B-206ENST00000549505 SLIRPQ9GZT3 109 aaKnown RBP9.26□□□□□ -0.93
RAB5B-206ENST00000549505 EXOSC3Q9NQT5 275 aaKnown RBP9.26□□□□□ -0.93
RAB5B-206ENST00000549505 GPR83Q9NYM4 423 aa9.26□□□□□ -0.93
RAB5B-206ENST00000549505 AASSQ9UDR5 926 aa9.26□□□□□ -0.93
RAB5B-206ENST00000549505 CDH10Q9Y6N8 788 aa9.26□□□□□ -0.93
RAB5B-206ENST00000549505 B4DGG1 531 aa9.26□□□□□ -0.93
RAB5B-206ENST00000549505 STK25O00506 426 aa9.26□□□□□ -0.93
RAB5B-206ENST00000549505 PRODHO43272 600 aa9.26□□□□□ -0.93
RAB5B-206ENST00000549505 PRAMEF2O60811 474 aa9.26□□□□□ -0.93
RAB5B-206ENST00000549505 RDH16O75452 317 aa9.26□□□□□ -0.93
RAB5B-206ENST00000549505 STSP08842 583 aa9.26□□□□□ -0.93
RAB5B-206ENST00000549505 CCNYL3P0C7X3 344 aa9.26□□□□□ -0.93
RAB5B-206ENST00000549505 ALPPL2P10696 532 aa9.26□□□□□ -0.93
RAB5B-206ENST00000549505 GLB1P16278 677 aa9.26□□□□□ -0.93
RAB5B-206ENST00000549505 GALP22466 123 aa9.26□□□□□ -0.93
RAB5B-206ENST00000549505 HTR2AP28223 471 aa9.26□□□□□ -0.93
RAB5B-206ENST00000549505 ACAA2P42765 397 aaKnown RBP9.26□□□□□ -0.93
RAB5B-206ENST00000549505 RGS6P49758 472 aa9.26□□□□□ -0.93
RAB5B-206ENST00000549505 GRM7Q14831 915 aa9.26□□□□□ -0.93
RAB5B-206ENST00000549505 SLC27A4Q6P1M0 643 aa9.26□□□□□ -0.93
RAB5B-206ENST00000549505 GALNT12Q8IXK2 581 aa9.26□□□□□ -0.93
RAB5B-206ENST00000549505 SIMC1Q8NDZ2 872 aa9.26□□□□□ -0.93
RAB5B-206ENST00000549505 FLCNQ8NFG4 579 aa9.26□□□□□ -0.93
RAB5B-206ENST00000549505 OR9A4Q8NGU2 314 aa9.26□□□□□ -0.93
RAB5B-206ENST00000549505 LMX1AQ8TE12 382 aa9.26□□□□□ -0.93
RAB5B-206ENST00000549505 S100ZQ8WXG8 99 aa9.26□□□□□ -0.93
RAB5B-206ENST00000549505 PDE7BQ9NP56 450 aa9.26□□□□□ -0.93
RAB5B-206ENST00000549505 PMF1-BGLAPU3KQ54 211 aa9.26□□□□□ -0.93
RAB5B-206ENST00000549505 IGHV1OR21-1A0A087WYE8 117 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 A0A0B4J2E0 115 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 A0A1B0GX12 115 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 FAM227AF5H4B4 570 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 SOX1O00570 391 aaPredicted RBP9.25□□□□□ -0.93
RAB5B-206ENST00000549505 TO15178 435 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 SURF4O15260 269 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 PTP4A3O75365 173 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 IGHA1P01876 353 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 LCKP06239 509 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 NGFRP08138 427 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 ZNF182P17025 639 aaPredicted RBP9.25□□□□□ -0.93
RAB5B-206ENST00000549505 C21orf33P30042 268 aaPredicted RBP9.25□□□□□ -0.93
RAB5B-206ENST00000549505 AVPR1BP47901 424 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 AFF3P51826 1226 aaKnown RBP9.25□□□□□ -0.93
RAB5B-206ENST00000549505 MLLT10P55197 1068 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 IL1RL1Q01638 556 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 ZNF91Q05481 1191 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 C1orf61Q13536 156 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 KLHL22Q53GT1 634 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 ZNF542PQ5EBM4 170 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 WDR45BQ5MNZ6 344 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 SLITRK4Q8IW52 837 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 OR8D4Q8NGM9 314 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 LGALS12Q96DT0 336 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 ZNF649Q9BS31 505 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 G6PC3Q9BUM1 346 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 TBC1D17Q9HA65 648 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 C12orf10Q9HB07 376 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 RNF215Q9Y6U7 377 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 CHP2O43745 196 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 PRKYO43930 277 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 FADS2O95864 444 aaKnown RBP9.25□□□□□ -0.93
RAB5B-206ENST00000549505 PTHP01270 115 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 CTSBP07858 339 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 TBXA2RP21731 343 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 MLLT11Q13015 90 aaPredicted RBP9.25□□□□□ -0.93
RAB5B-206ENST00000549505 TIGD6Q17RP2 521 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 ISXQ2M1V0 245 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 C6orf183Q5T699 404 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 ACSM5Q6NUN0 579 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 CASP12Q6UXS9 341 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 ZNF440Q8IYI8 595 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 C17orf47Q8NEP4 570 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 OR52R1Q8NGF1 315 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 C17orf50Q8WW18 174 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 RLN3Q8WXF3 142 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 TPSD1Q9BZJ3 242 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 TGIF2Q9GZN2 237 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 HOXD1Q9GZZ0 328 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 ZNF768Q9H5H4 540 aaKnown RBP9.25□□□□□ -0.93
RAB5B-206ENST00000549505 ANKRA2Q9H9E1 313 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 DNAJB12Q9NXW2 375 aaKnown RBP9.25□□□□□ -0.93
RAB5B-206ENST00000549505 PAIP2BQ9ULR5 123 aaKnown RBP9.25□□□□□ -0.93
RAB5B-206ENST00000549505 ICAM5Q9UMF0 924 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 BAIAP2Q9UQB8 552 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 IGHV5-51A0A0C4DH38 117 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 EFCAB7A8K855 629 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 TMX2-CTNND1H3BSU7 103 aa9.25□□□□□ -0.93
RAB5B-206ENST00000549505 CLDN4O14493 209 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 73.1 ms