RNA–Protein interactions for RNA: ENST00000549162.5

SCAF11-212, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 1 (best) BASIC

Gene SCAF11, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-212ENST00000549162 ADH4P08319 380 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 ASAH2BP0C7U1 165 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 TSPAN8P19075 237 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 ATP6V1C1P21283 382 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 CD40P25942 277 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 ALDH3A2P51648 485 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 EFNA3P52797 238 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 UCNP55089 124 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 RNF4P78317 190 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 MFSD13AQ14CX5 517 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 TRIM40Q6P9F5 258 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 DEGS2Q6QHC5 323 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 RBM44Q6ZP01 1051 aaKnown RBP4.5□□□□□ -1.69
SCAF11-212ENST00000549162 LHFPL3Q86UP9 236 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 ZDHHC21Q8IVQ6 265 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 CLEC4FQ8N1N0 589 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 KCNE4Q8WWG9 221 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 FCGR1BQ92637 280 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 FANCD2OSQ96PS1 177 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 EBF4Q9BQW3 602 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 POLDIP3Q9BY77 421 aaKnown RBP4.5□□□□□ -1.69
SCAF11-212ENST00000549162 POFUT1Q9H488 388 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 MID1IP1Q9NPA3 183 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 SLAMF7Q9NQ25 335 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 ANGPTL2Q9UKU9 493 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 STUB1Q9UNE7 303 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 DLGAP4Q9Y2H0 992 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 ENPP4Q9Y6X5 453 aa4.5□□□□□ -1.69
SCAF11-212ENST00000549162 SNRNP200O75643 2136 aaKnown RBP4.49□□□□□ -1.69
SCAF11-212ENST00000549162 OR14I1A6ND48 311 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 OR6C65A6NJZ3 312 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 USP12O75317 370 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 VIPP01282 170 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 UMODP07911 640 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 KIR3DL1P43629 444 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 ARRB1P49407 418 aaPredicted RBP4.49□□□□□ -1.69
SCAF11-212ENST00000549162 SYTL3Q4VX76 610 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 IRGCQ6NXR0 463 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 UGT2A3Q6UWM9 527 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 SEZ6L2Q6UXD5 910 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 UNQ9370/PRO34162Q6UXP9 181 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 PRR23CQ6ZRP0 262 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 ATG4DQ86TL0 474 aaPredicted RBP4.49□□□□□ -1.69
SCAF11-212ENST00000549162 ZNF740Q8NDX6 193 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 SCAMP4Q969E2 229 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 CNRIP1Q96F85 164 aaPredicted RBP4.49□□□□□ -1.69
SCAF11-212ENST00000549162 MRPL1Q9BYD6 325 aaKnown RBP4.49□□□□□ -1.69
SCAF11-212ENST00000549162 FANCEQ9HB96 536 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 TMEM160Q9NX00 188 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 CRIM1Q9NZV1 1036 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 SLC17A6Q9P2U8 582 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 SCN3AQ9NY46 2000 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 RTCAO00442 366 aaKnown RBP4.49□□□□□ -1.69
SCAF11-212ENST00000549162 PHGDHO43175 533 aaKnown RBP4.49□□□□□ -1.69
SCAF11-212ENST00000549162 CHP2O43745 196 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 NDUFS6O75380 124 aaKnown RBP4.49□□□□□ -1.69
SCAF11-212ENST00000549162 WISP2O76076 250 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 SNX4O95219 450 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 ANXA6P08133 673 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 PRSS56P0CW18 603 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 NR2F6P10588 404 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 PNMTP11086 282 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 PORP16435 677 aaPredicted RBP4.49□□□□□ -1.69
SCAF11-212ENST00000549162 UGT1A6P19224 532 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 ITIH1P19827 911 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 UGT1A1P22309 533 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 GJC1P36383 396 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 OMPP47874 163 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 HTR6P50406 440 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 CNPY1Q3B7I2 92 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 REEP3Q6NUK4 255 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 FAM122BQ7Z309 247 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 GALNTL5Q7Z4T8 443 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 TSPYL5Q86VY4 417 aaPredicted RBP4.49□□□□□ -1.69
SCAF11-212ENST00000549162 C4orf33Q8N1A6 199 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 C9orf43Q8TAL5 461 aaPredicted RBP4.49□□□□□ -1.69
SCAF11-212ENST00000549162 ZNF519Q8TB69 540 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 RNF166Q96A37 237 aaPredicted RBP4.49□□□□□ -1.69
SCAF11-212ENST00000549162 HBEGFQ99075 208 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 PIGQQ9BRB3 760 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 ARL15Q9NXU5 204 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 MRPL39Q9NYK5 338 aaKnown RBP4.49□□□□□ -1.69
SCAF11-212ENST00000549162 P2RX2Q9UBL9 471 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 NUDT5Q9UKK9 219 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 SNX11Q9Y5W9 270 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 ATP23Q9Y6H3 246 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 SH3PXD2BA1X283 911 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 PRAMEF25A6NGN4 478 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 DLL1O00548 723 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 LAMTOR5O43504 91 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 DIAPH2O60879 1101 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 CT45A8P0DMV1 189 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 CT45A9P0DMV2 189 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 ACP2P11117 423 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 ANXA8P13928 327 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 ELAVL4P26378 380 aaKnown RBP4.49□□□□□ -1.69
SCAF11-212ENST00000549162 AVPR1BP47901 424 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 GSK3BP49841 420 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 BLVRAP53004 296 aa4.49□□□□□ -1.69
SCAF11-212ENST00000549162 ARPP19P56211 112 aa4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 88.4 ms