RNA–Protein interactions for RNA: ENST00000548823.1

CTDSP2-204, Transcript of CTD small phosphatase 2, humanhuman

TSL 1 (best) BASIC

Gene CTDSP2, Length 1,368 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP2-204ENST00000548823 ELP4Q96EB1 424 aa18.47■□□□□ 0.55
CTDSP2-204ENST00000548823 TMEM19Q96HH6 336 aa18.47■□□□□ 0.55
CTDSP2-204ENST00000548823 OR51I1Q9H343 314 aa18.47■□□□□ 0.55
CTDSP2-204ENST00000548823 SERHL2Q9H4I8 314 aa18.47■□□□□ 0.55
CTDSP2-204ENST00000548823 BCL2L10Q9HD36 194 aa18.47■□□□□ 0.55
CTDSP2-204ENST00000548823 FAM60AQ9NP50 221 aa18.47■□□□□ 0.55
CTDSP2-204ENST00000548823 PCDHGB3Q9Y5G1 929 aa18.47■□□□□ 0.55
CTDSP2-204ENST00000548823 PGM3O95394 542 aa18.46■□□□□ 0.55
CTDSP2-204ENST00000548823 SNAP29O95721 258 aa18.46■□□□□ 0.55
CTDSP2-204ENST00000548823 AQP1P29972 269 aa18.46■□□□□ 0.55
CTDSP2-204ENST00000548823 FEN1P39748 380 aaKnown RBP18.46■□□□□ 0.55
CTDSP2-204ENST00000548823 RAD23AP54725 363 aa18.46■□□□□ 0.55
CTDSP2-204ENST00000548823 SNRPNP63162 240 aaKnown RBP18.46■□□□□ 0.55
CTDSP2-204ENST00000548823 MAPK11Q15759 364 aa18.46■□□□□ 0.55
CTDSP2-204ENST00000548823 TTC23Q5W5X9 447 aa18.46■□□□□ 0.55
CTDSP2-204ENST00000548823 TMEM179BQ7Z7N9 219 aa18.46■□□□□ 0.55
CTDSP2-204ENST00000548823 LGI4Q8N135 537 aa18.46■□□□□ 0.55
CTDSP2-204ENST00000548823 ZNF607Q96SK3 696 aa18.46■□□□□ 0.55
CTDSP2-204ENST00000548823 YTHDF1Q9BYJ9 559 aaKnown RBP18.46■□□□□ 0.55
CTDSP2-204ENST00000548823 REEP1Q9H902 201 aa18.46■□□□□ 0.55
CTDSP2-204ENST00000548823 C3orf18Q9UK00 162 aa18.46■□□□□ 0.55
CTDSP2-204ENST00000548823 MRPS2Q9Y399 296 aaKnown RBP18.46■□□□□ 0.55
CTDSP2-204ENST00000548823 hCG_2039718K7EN88 272 aa18.45■□□□□ 0.54
CTDSP2-204ENST00000548823 CYR61O00622 381 aa18.45■□□□□ 0.54
CTDSP2-204ENST00000548823 ADAMDEC1O15204 470 aa18.45■□□□□ 0.54
CTDSP2-204ENST00000548823 EIF2S1P05198 315 aaKnown RBP18.45■□□□□ 0.54
CTDSP2-204ENST00000548823 PPP2R1BP30154 601 aa18.45■□□□□ 0.54
CTDSP2-204ENST00000548823 GABRA4P48169 554 aa18.45■□□□□ 0.54
CTDSP2-204ENST00000548823 IST1P53990 364 aa18.45■□□□□ 0.54
CTDSP2-204ENST00000548823 EMP3P54852 163 aa18.45■□□□□ 0.54
CTDSP2-204ENST00000548823 RAB38P57729 211 aa18.45■□□□□ 0.54
CTDSP2-204ENST00000548823 NDUFA9Q16795 377 aa18.45■□□□□ 0.54
CTDSP2-204ENST00000548823 GARNL3Q5VVW2 1013 aa18.45■□□□□ 0.54
CTDSP2-204ENST00000548823 TSEN54Q7Z6J9 526 aaKnown RBP18.45■□□□□ 0.54
CTDSP2-204ENST00000548823 CA13Q8N1Q1 262 aa18.45■□□□□ 0.54
CTDSP2-204ENST00000548823 BBS10Q8TAM1 723 aa18.45■□□□□ 0.54
CTDSP2-204ENST00000548823 NACC2Q96BF6 587 aa18.45■□□□□ 0.54
CTDSP2-204ENST00000548823 ANKHQ9HCJ1 492 aa18.45■□□□□ 0.54
CTDSP2-204ENST00000548823 VNN3Q9NY84 501 aa18.45■□□□□ 0.54
CTDSP2-204ENST00000548823 NDUFAF4Q9P032 175 aa18.45■□□□□ 0.54
CTDSP2-204ENST00000548823 PTGFRNQ9P2B2 879 aa18.45■□□□□ 0.54
CTDSP2-204ENST00000548823 NDOR1Q9UHB4 597 aa18.45■□□□□ 0.54
CTDSP2-204ENST00000548823 PLCL2Q9UPR0 1127 aa18.45■□□□□ 0.54
CTDSP2-204ENST00000548823 SERPINB7O75635 380 aa18.44■□□□□ 0.54
CTDSP2-204ENST00000548823 MFN2O95140 757 aa18.44■□□□□ 0.54
CTDSP2-204ENST00000548823 H6PDO95479 791 aa18.44■□□□□ 0.54
CTDSP2-204ENST00000548823 AGR2O95994 175 aa18.44■□□□□ 0.54
CTDSP2-204ENST00000548823 BCHEP06276 602 aa18.44■□□□□ 0.54
CTDSP2-204ENST00000548823 C8orf89P0DMQ9 161 aa18.44■□□□□ 0.54
CTDSP2-204ENST00000548823 ETS2P15036 469 aa18.44■□□□□ 0.54
CTDSP2-204ENST00000548823 PORP16435 677 aaPredicted RBP18.44■□□□□ 0.54
CTDSP2-204ENST00000548823 CD247P20963 164 aa18.44■□□□□ 0.54
CTDSP2-204ENST00000548823 XKP51811 444 aa18.44■□□□□ 0.54
CTDSP2-204ENST00000548823 RPS6KA3P51812 740 aa18.44■□□□□ 0.54
CTDSP2-204ENST00000548823 RPS26P62854 115 aaKnown RBP18.44■□□□□ 0.54
CTDSP2-204ENST00000548823 FAM53BQ14153 422 aa18.44■□□□□ 0.54
CTDSP2-204ENST00000548823 GFRALQ6UXV0 394 aa18.44■□□□□ 0.54
CTDSP2-204ENST00000548823 NUP43Q8NFH3 380 aa18.44■□□□□ 0.54
CTDSP2-204ENST00000548823 SPPL2AQ8TCT8 520 aa18.44■□□□□ 0.54
CTDSP2-204ENST00000548823 ADAMTS18Q8TE60 1221 aa18.44■□□□□ 0.54
CTDSP2-204ENST00000548823 CYGBQ8WWM9 190 aa18.44■□□□□ 0.54
CTDSP2-204ENST00000548823 NR4A3Q92570 626 aa18.44■□□□□ 0.54
CTDSP2-204ENST00000548823 RAB8BQ92930 207 aa18.44■□□□□ 0.54
CTDSP2-204ENST00000548823 ZNF300Q96RE9 604 aaPredicted RBP18.44■□□□□ 0.54
CTDSP2-204ENST00000548823 SPATA5L1Q9BVQ7 753 aa18.44■□□□□ 0.54
CTDSP2-204ENST00000548823 BTBD2Q9BX70 525 aa18.44■□□□□ 0.54
CTDSP2-204ENST00000548823 MRPS26Q9BYN8 205 aaKnown RBP18.44■□□□□ 0.54
CTDSP2-204ENST00000548823 MCCC2Q9HCC0 563 aa18.44■□□□□ 0.54
CTDSP2-204ENST00000548823 LIPT1Q9Y234 373 aa18.44■□□□□ 0.54
CTDSP2-204ENST00000548823 MYRFQ9Y2G1 1151 aa18.44■□□□□ 0.54
CTDSP2-204ENST00000548823 NAALAD2Q9Y3Q0 740 aa18.44■□□□□ 0.54
CTDSP2-204ENST00000548823 MAGED1Q9Y5V3 778 aaPredicted RBP18.44■□□□□ 0.54
CTDSP2-204ENST00000548823 GPC6Q9Y625 555 aaPredicted RBP18.44■□□□□ 0.54
CTDSP2-204ENST00000548823 DPPA5A6NC42 116 aa18.43■□□□□ 0.54
CTDSP2-204ENST00000548823 A8MVJ9 347 aa18.43■□□□□ 0.54
CTDSP2-204ENST00000548823 H3BNH8 94 aa18.43■□□□□ 0.54
CTDSP2-204ENST00000548823 HMGN2P05204 90 aaKnown RBP18.43■□□□□ 0.54
CTDSP2-204ENST00000548823 UMODP07911 640 aa18.43■□□□□ 0.54
CTDSP2-204ENST00000548823 SMIM18P0DKX4 95 aa18.43■□□□□ 0.54
CTDSP2-204ENST00000548823 OR12D1P0DN82 309 aa18.43■□□□□ 0.54
CTDSP2-204ENST00000548823 CPMP14384 443 aa18.43■□□□□ 0.54
CTDSP2-204ENST00000548823 AGAP20933 346 aa18.43■□□□□ 0.54
CTDSP2-204ENST00000548823 CA7P43166 264 aa18.43■□□□□ 0.54
CTDSP2-204ENST00000548823 MAN2A2P49641 1150 aa18.43■□□□□ 0.54
CTDSP2-204ENST00000548823 CRISP3P54108 245 aa18.43■□□□□ 0.54
CTDSP2-204ENST00000548823 DCDP81605 110 aaKnown RBP18.43■□□□□ 0.54
CTDSP2-204ENST00000548823 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.43■□□□□ 0.54
CTDSP2-204ENST00000548823 ZNF750Q32MQ0 723 aa18.43■□□□□ 0.54
CTDSP2-204ENST00000548823 TCTE1Q5JU00 501 aa18.43■□□□□ 0.54
CTDSP2-204ENST00000548823 TMEM107Q6UX40 140 aa18.43■□□□□ 0.54
CTDSP2-204ENST00000548823 KRT73Q86Y46 540 aa18.43■□□□□ 0.54
CTDSP2-204ENST00000548823 GPR135Q8IZ08 494 aa18.43■□□□□ 0.54
CTDSP2-204ENST00000548823 OR9A2Q8NGT5 310 aa18.43■□□□□ 0.54
CTDSP2-204ENST00000548823 CSF3RQ99062 836 aa18.43■□□□□ 0.54
CTDSP2-204ENST00000548823 SMURF2Q9HAU4 748 aa18.43■□□□□ 0.54
CTDSP2-204ENST00000548823 CALML5Q9NZT1 146 aa18.43■□□□□ 0.54
CTDSP2-204ENST00000548823 TMEFF2Q9UIK5 374 aaPredicted RBP18.43■□□□□ 0.54
CTDSP2-204ENST00000548823 SAMHD1Q9Y3Z3 626 aaKnown RBP18.43■□□□□ 0.54
CTDSP2-204ENST00000548823 PCDHGB5Q9Y5G0 923 aa18.43■□□□□ 0.54
CTDSP2-204ENST00000548823 ORC6Q9Y5N6 252 aa18.43■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms