RNA–Protein interactions for RNA: ENST00000547764.1

PRPF40B-206, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-206ENST00000547764 TBL1XR1Q9BZK7 514 aa17.04■□□□□ 0.32
PRPF40B-206ENST00000547764 OR2B2Q9GZK3 357 aa17.04■□□□□ 0.32
PRPF40B-206ENST00000547764 DSN1Q9H410 356 aa17.04■□□□□ 0.32
PRPF40B-206ENST00000547764 PCDHGB3Q9Y5G1 929 aa17.04■□□□□ 0.32
PRPF40B-206ENST00000547764 FIGNL2A6NMB9 653 aa17.03■□□□□ 0.32
PRPF40B-206ENST00000547764 OXSR1O95747 527 aaPredicted RBP17.03■□□□□ 0.32
PRPF40B-206ENST00000547764 ANGPTL1O95841 491 aa17.03■□□□□ 0.32
PRPF40B-206ENST00000547764 IL6P05231 212 aa17.03■□□□□ 0.32
PRPF40B-206ENST00000547764 NGFRP08138 427 aa17.03■□□□□ 0.32
PRPF40B-206ENST00000547764 GP1BBP13224 206 aa17.03■□□□□ 0.32
PRPF40B-206ENST00000547764 BMP7P18075 431 aa17.03■□□□□ 0.32
PRPF40B-206ENST00000547764 TBXA2RP21731 343 aa17.03■□□□□ 0.32
PRPF40B-206ENST00000547764 ACVR2AP27037 513 aa17.03■□□□□ 0.32
PRPF40B-206ENST00000547764 LCN1P31025 176 aa17.03■□□□□ 0.32
PRPF40B-206ENST00000547764 SRD5A2P31213 254 aa17.03■□□□□ 0.32
PRPF40B-206ENST00000547764 ZFP36L2P47974 494 aaKnown RBP17.03■□□□□ 0.32
PRPF40B-206ENST00000547764 SMSP52788 366 aa17.03■□□□□ 0.32
PRPF40B-206ENST00000547764 NHSL2Q5HYW2 709 aa17.03■□□□□ 0.32
PRPF40B-206ENST00000547764 DCST2Q5T1A1 773 aa17.03■□□□□ 0.32
PRPF40B-206ENST00000547764 VASNQ6EMK4 673 aa17.03■□□□□ 0.32
PRPF40B-206ENST00000547764 MAMDC2Q7Z304 686 aaPredicted RBP17.03■□□□□ 0.32
PRPF40B-206ENST00000547764 MIER2Q8N344 545 aa17.03■□□□□ 0.32
PRPF40B-206ENST00000547764 ZNF808Q8N4W9 903 aaPredicted RBP17.03■□□□□ 0.32
PRPF40B-206ENST00000547764 FADS6Q8N9I5 356 aa17.03■□□□□ 0.32
PRPF40B-206ENST00000547764 OR2M3Q8NG83 312 aa17.03■□□□□ 0.32
PRPF40B-206ENST00000547764 OR4K17Q8NGC6 315 aa17.03■□□□□ 0.32
PRPF40B-206ENST00000547764 OR9I1Q8NGQ6 314 aa17.03■□□□□ 0.32
PRPF40B-206ENST00000547764 OR14L1PQ8NHC6 308 aa17.03■□□□□ 0.32
PRPF40B-206ENST00000547764 SLC35G5Q96KT7 338 aa17.03■□□□□ 0.32
PRPF40B-206ENST00000547764 TIMP4Q99727 224 aa17.03■□□□□ 0.32
PRPF40B-206ENST00000547764 INPP5KQ9BT40 448 aa17.03■□□□□ 0.32
PRPF40B-206ENST00000547764 CCDC28BQ9BUN5 200 aa17.03■□□□□ 0.32
PRPF40B-206ENST00000547764 ALKBH4Q9NXW9 302 aa17.03■□□□□ 0.32
PRPF40B-206ENST00000547764 TAS2R10Q9NYW0 307 aa17.03■□□□□ 0.32
PRPF40B-206ENST00000547764 MED11Q9P086 117 aa17.03■□□□□ 0.32
PRPF40B-206ENST00000547764 NCOA6Q14686 2063 aaPredicted RBP17.03■□□□□ 0.32
PRPF40B-206ENST00000547764 SETXQ7Z333 2677 aaKnown RBP17.03■□□□□ 0.32
PRPF40B-206ENST00000547764 MED12Q93074 2177 aa17.02■□□□□ 0.32
PRPF40B-206ENST00000547764 ALG1L2C9J202 215 aa17.02■□□□□ 0.32
PRPF40B-206ENST00000547764 WDR1O75083 606 aa17.02■□□□□ 0.32
PRPF40B-206ENST00000547764 DPP4P27487 766 aa17.02■□□□□ 0.32
PRPF40B-206ENST00000547764 CDKN2CP42773 168 aa17.02■□□□□ 0.32
PRPF40B-206ENST00000547764 CASP9P55211 416 aa17.02■□□□□ 0.32
PRPF40B-206ENST00000547764 C17orf67Q0P5P2 114 aa17.02■□□□□ 0.32
PRPF40B-206ENST00000547764 LRRC74AQ0VAA2 488 aa17.02■□□□□ 0.32
PRPF40B-206ENST00000547764 SAXO2Q658L1 398 aa17.02■□□□□ 0.32
PRPF40B-206ENST00000547764 RTL6Q6ICC9 239 aa17.02■□□□□ 0.32
PRPF40B-206ENST00000547764 TMEM211Q6ICI0 200 aa17.02■□□□□ 0.32
PRPF40B-206ENST00000547764 MIPOL1Q8TD10 442 aa17.02■□□□□ 0.32
PRPF40B-206ENST00000547764 ABTB1Q969K4 478 aaPredicted RBP17.02■□□□□ 0.32
PRPF40B-206ENST00000547764 DTNBP1Q96EV8 351 aa17.02■□□□□ 0.32
PRPF40B-206ENST00000547764 THOC1Q96FV9 657 aaKnown RBP17.02■□□□□ 0.32
PRPF40B-206ENST00000547764 PANX1Q96RD7 426 aa17.02■□□□□ 0.32
PRPF40B-206ENST00000547764 SLC35A5Q9BS91 424 aa17.02■□□□□ 0.32
PRPF40B-206ENST00000547764 UGT2B28Q9BY64 529 aa17.02■□□□□ 0.32
PRPF40B-206ENST00000547764 UBQLN4Q9NRR5 601 aa17.02■□□□□ 0.32
PRPF40B-206ENST00000547764 DKKL1Q9UK85 242 aa17.02■□□□□ 0.32
PRPF40B-206ENST00000547764 MRPS18CQ9Y3D5 142 aaKnown RBP17.02■□□□□ 0.32
PRPF40B-206ENST00000547764 FAM215AQ9Y5M1 114 aa17.02■□□□□ 0.32
PRPF40B-206ENST00000547764 CCDC154A6NI56 674 aa17.01■□□□□ 0.31
PRPF40B-206ENST00000547764 DUXAA6NLW8 204 aa17.01■□□□□ 0.31
PRPF40B-206ENST00000547764 ZIC3O60481 467 aa17.01■□□□□ 0.31
PRPF40B-206ENST00000547764 EDF1O60869 148 aaKnown RBP17.01■□□□□ 0.31
PRPF40B-206ENST00000547764 C1QCP02747 245 aa17.01■□□□□ 0.31
PRPF40B-206ENST00000547764 ATP6V1C1P21283 382 aa17.01■□□□□ 0.31
PRPF40B-206ENST00000547764 CHI3L1P36222 383 aaPredicted RBP17.01■□□□□ 0.31
PRPF40B-206ENST00000547764 MRPL19P49406 292 aaKnown RBP17.01■□□□□ 0.31
PRPF40B-206ENST00000547764 POLR2JP52435 117 aaKnown RBP17.01■□□□□ 0.31
PRPF40B-206ENST00000547764 DSCR4P56555 118 aaPredicted RBP17.01■□□□□ 0.31
PRPF40B-206ENST00000547764 HSP90B2PQ58FF3 399 aa17.01■□□□□ 0.31
PRPF40B-206ENST00000547764 DCST1Q5T197 706 aa17.01■□□□□ 0.31
PRPF40B-206ENST00000547764 XKRXQ6PP77 449 aa17.01■□□□□ 0.31
PRPF40B-206ENST00000547764 ULK2Q8IYT8 1036 aa17.01■□□□□ 0.31
PRPF40B-206ENST00000547764 NEURL3Q96EH8 262 aa17.01■□□□□ 0.31
PRPF40B-206ENST00000547764 OR51I1Q9H343 314 aa17.01■□□□□ 0.31
PRPF40B-206ENST00000547764 IGLV3-32A0A0A0MS00 114 aa17■□□□□ 0.31
PRPF40B-206ENST00000547764 FAM234BA2RU67 622 aa17■□□□□ 0.31
PRPF40B-206ENST00000547764 SCDO00767 359 aa17■□□□□ 0.31
PRPF40B-206ENST00000547764 NDUFB5O43674 189 aa17■□□□□ 0.31
PRPF40B-206ENST00000547764 ACTL6AO96019 429 aa17■□□□□ 0.31
PRPF40B-206ENST00000547764 GSNP06396 782 aa17■□□□□ 0.31
PRPF40B-206ENST00000547764 GABRA1P14867 456 aa17■□□□□ 0.31
PRPF40B-206ENST00000547764 HPGDP15428 266 aa17■□□□□ 0.31
PRPF40B-206ENST00000547764 AGAP20933 346 aa17■□□□□ 0.31
PRPF40B-206ENST00000547764 TCEA1P23193 301 aaKnown RBP17■□□□□ 0.31
PRPF40B-206ENST00000547764 GCKP35557 465 aa17■□□□□ 0.31
PRPF40B-206ENST00000547764 GFRA1P56159 465 aa17■□□□□ 0.31
PRPF40B-206ENST00000547764 NUP107P57740 925 aa17■□□□□ 0.31
PRPF40B-206ENST00000547764 STX1BP61266 288 aa17■□□□□ 0.31
PRPF40B-206ENST00000547764 PMPCAQ10713 525 aa17■□□□□ 0.31
PRPF40B-206ENST00000547764 C1orf185Q5T7R7 199 aa17■□□□□ 0.31
PRPF40B-206ENST00000547764 HIST2H2BCQ6DN03 193 aa17■□□□□ 0.31
PRPF40B-206ENST00000547764 TNFAIP8L2Q6P589 184 aaPredicted RBP17■□□□□ 0.31
PRPF40B-206ENST00000547764 B3GNT6Q6ZMB0 384 aa17■□□□□ 0.31
PRPF40B-206ENST00000547764 ZNF621Q6ZSS3 439 aa17■□□□□ 0.31
PRPF40B-206ENST00000547764 IFNEQ86WN2 208 aa17■□□□□ 0.31
PRPF40B-206ENST00000547764 ARFGAP2Q8N6H7 521 aa17■□□□□ 0.31
PRPF40B-206ENST00000547764 TRIML2Q8N7C3 387 aa17■□□□□ 0.31
PRPF40B-206ENST00000547764 GATSQ8NAP1 163 aa17■□□□□ 0.31
PRPF40B-206ENST00000547764 CHDHQ8NE62 594 aaPredicted RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms