RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 TNFRSF21O75509 655 aa12.02□□□□□ -0.49
CPSF6-204ENST00000547486 SMNDC1O75940 238 aaKnown RBP eCLIP12.02□□□□□ -0.49
CPSF6-204ENST00000547486 KCNH1O95259 989 aa12.02□□□□□ -0.49
CPSF6-204ENST00000547486 ATE1O95260 518 aa12.02□□□□□ -0.49
CPSF6-204ENST00000547486 ACP2P11117 423 aa12.02□□□□□ -0.49
CPSF6-204ENST00000547486 BCKDHAP12694 445 aa12.02□□□□□ -0.49
CPSF6-204ENST00000547486 KLK2P20151 261 aa12.02□□□□□ -0.49
CPSF6-204ENST00000547486 ARRB2P32121 409 aa12.02□□□□□ -0.49
CPSF6-204ENST00000547486 GPC1P35052 558 aa12.02□□□□□ -0.49
CPSF6-204ENST00000547486 CLK3P49761 638 aaKnown RBP12.02□□□□□ -0.49
CPSF6-204ENST00000547486 MANFP55145 182 aaKnown RBP12.02□□□□□ -0.49
CPSF6-204ENST00000547486 RPL38P63173 70 aaKnown RBP12.02□□□□□ -0.49
CPSF6-204ENST00000547486 EEF1A1P68104 462 aaKnown RBP12.02□□□□□ -0.49
CPSF6-204ENST00000547486 C17orf67Q0P5P2 114 aa12.02□□□□□ -0.49
CPSF6-204ENST00000547486 GANABQ14697 944 aaKnown RBP12.02□□□□□ -0.49
CPSF6-204ENST00000547486 GALNTL6Q49A17 601 aa12.02□□□□□ -0.49
CPSF6-204ENST00000547486 EEF1A1P5Q5VTE0 462 aa12.02□□□□□ -0.49
CPSF6-204ENST00000547486 FIGNL1Q6PIW4 674 aa12.02□□□□□ -0.49
CPSF6-204ENST00000547486 ZNF474Q6S9Z5 364 aaPredicted RBP12.02□□□□□ -0.49
CPSF6-204ENST00000547486 PAMR1Q6UXH9 720 aa12.02□□□□□ -0.49
CPSF6-204ENST00000547486 TRABD2AQ86V40 505 aa12.02□□□□□ -0.49
CPSF6-204ENST00000547486 MEIOBQ8N635 442 aa12.02□□□□□ -0.49
CPSF6-204ENST00000547486 CNEP1R1Q8N9A8 125 aa12.02□□□□□ -0.49
CPSF6-204ENST00000547486 FBXO30Q8TB52 745 aa12.02□□□□□ -0.49
CPSF6-204ENST00000547486 FAM110BQ8TC76 370 aa12.02□□□□□ -0.49
CPSF6-204ENST00000547486 SLC9A6Q92581 669 aa12.02□□□□□ -0.49
CPSF6-204ENST00000547486 MBD6Q96DN6 1003 aa12.02□□□□□ -0.49
CPSF6-204ENST00000547486 OTUB1Q96FW1 271 aaPredicted RBP12.02□□□□□ -0.49
CPSF6-204ENST00000547486 APOPT1Q96IL0 206 aa12.02□□□□□ -0.49
CPSF6-204ENST00000547486 FAM111AQ96PZ2 611 aa12.02□□□□□ -0.49
CPSF6-204ENST00000547486 KLHDC3Q9BQ90 382 aa12.02□□□□□ -0.49
CPSF6-204ENST00000547486 TRMOQ9BU70 441 aa12.02□□□□□ -0.49
CPSF6-204ENST00000547486 PINK1Q9BXM7 581 aa12.02□□□□□ -0.49
CPSF6-204ENST00000547486 TBL1XR1Q9BZK7 514 aa12.02□□□□□ -0.49
CPSF6-204ENST00000547486 OPN3Q9H1Y3 402 aaPredicted RBP12.02□□□□□ -0.49
CPSF6-204ENST00000547486 C3orf14Q9HBI5 128 aa12.02□□□□□ -0.49
CPSF6-204ENST00000547486 MKS1Q9NXB0 559 aa12.02□□□□□ -0.49
CPSF6-204ENST00000547486 MAP1AP78559 2803 aaPredicted RBP12.01□□□□□ -0.49
CPSF6-204ENST00000547486 TTC36A6NLP5 189 aa12.01□□□□□ -0.49
CPSF6-204ENST00000547486 LINC01387J3KSC0 135 aa12.01□□□□□ -0.49
CPSF6-204ENST00000547486 MSTNO14793 375 aa12.01□□□□□ -0.49
CPSF6-204ENST00000547486 PIP5K1BO14986 540 aa12.01□□□□□ -0.49
CPSF6-204ENST00000547486 NPHS1O60500 1241 aa12.01□□□□□ -0.49
CPSF6-204ENST00000547486 DIAPH2O60879 1101 aa12.01□□□□□ -0.49
CPSF6-204ENST00000547486 SPAG7O75391 227 aa12.01□□□□□ -0.49
CPSF6-204ENST00000547486 KCNK2O95069 426 aa12.01□□□□□ -0.49
CPSF6-204ENST00000547486 CGAP01215 116 aa12.01□□□□□ -0.49
CPSF6-204ENST00000547486 CRHP06850 196 aa12.01□□□□□ -0.49
CPSF6-204ENST00000547486 CREB1P16220 341 aa12.01□□□□□ -0.49
CPSF6-204ENST00000547486 CPOXP36551 454 aa12.01□□□□□ -0.49
CPSF6-204ENST00000547486 PSMD4P55036 377 aaKnown RBP12.01□□□□□ -0.49
CPSF6-204ENST00000547486 DIO3P55073 304 aa12.01□□□□□ -0.49
CPSF6-204ENST00000547486 EEFSECP57772 596 aaKnown RBP12.01□□□□□ -0.49
CPSF6-204ENST00000547486 ADAM8P78325 824 aa12.01□□□□□ -0.49
CPSF6-204ENST00000547486 PON3Q15166 354 aa12.01□□□□□ -0.49
CPSF6-204ENST00000547486 DUSP5Q16690 384 aa12.01□□□□□ -0.49
CPSF6-204ENST00000547486 GLYR1Q49A26 553 aaPredicted RBP12.01□□□□□ -0.49
CPSF6-204ENST00000547486 EXOSC6Q5RKV6 272 aaKnown RBP12.01□□□□□ -0.49
CPSF6-204ENST00000547486 OR2A2Q6IF42 318 aa12.01□□□□□ -0.49
CPSF6-204ENST00000547486 MFSD12Q6NUT3 480 aa12.01□□□□□ -0.49
CPSF6-204ENST00000547486 GGNQ86UU5 652 aa12.01□□□□□ -0.49
CPSF6-204ENST00000547486 DDIASQ8IXT1 998 aa12.01□□□□□ -0.49
CPSF6-204ENST00000547486 CDRT4Q8N9R6 151 aa12.01□□□□□ -0.49
CPSF6-204ENST00000547486 GATSQ8NAP1 163 aa12.01□□□□□ -0.49
CPSF6-204ENST00000547486 CHDHQ8NE62 594 aaPredicted RBP12.01□□□□□ -0.49
CPSF6-204ENST00000547486 OR7A2PQ8NGA2 310 aa12.01□□□□□ -0.49
CPSF6-204ENST00000547486 CEP70Q8NHQ1 597 aa12.01□□□□□ -0.49
CPSF6-204ENST00000547486 FNDC9Q8TBE3 224 aa12.01□□□□□ -0.49
CPSF6-204ENST00000547486 TWIST2Q8WVJ9 160 aa12.01□□□□□ -0.49
CPSF6-204ENST00000547486 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.01□□□□□ -0.49
CPSF6-204ENST00000547486 TRIM44Q96DX7 344 aaPredicted RBP12.01□□□□□ -0.49
CPSF6-204ENST00000547486 ZBED6CLQ96FA7 236 aaPredicted RBP12.01□□□□□ -0.49
CPSF6-204ENST00000547486 PGM2Q96G03 612 aa12.01□□□□□ -0.49
CPSF6-204ENST00000547486 C3orf30Q96M34 536 aa12.01□□□□□ -0.49
CPSF6-204ENST00000547486 WFIKKN1Q96NZ8 548 aa12.01□□□□□ -0.49
CPSF6-204ENST00000547486 ALPK1Q96QP1 1244 aa12.01□□□□□ -0.49
CPSF6-204ENST00000547486 PIGQQ9BRB3 760 aa12.01□□□□□ -0.49
CPSF6-204ENST00000547486 RNF122Q9H9V4 155 aa12.01□□□□□ -0.49
CPSF6-204ENST00000547486 ACSS1Q9NUB1 689 aaPredicted RBP12.01□□□□□ -0.49
CPSF6-204ENST00000547486 MID2Q9UJV3 735 aa12.01□□□□□ -0.49
CPSF6-204ENST00000547486 VDAC3Q9Y277 283 aa12.01□□□□□ -0.49
CPSF6-204ENST00000547486 TMED5Q9Y3A6 229 aa12.01□□□□□ -0.49
CPSF6-204ENST00000547486 AP4B1Q9Y6B7 739 aa12.01□□□□□ -0.49
CPSF6-204ENST00000547486 SETD2Q9BYW2 2564 aaPredicted RBP12□□□□□ -0.49
CPSF6-204ENST00000547486 ALG1L2C9J202 215 aa12□□□□□ -0.49
CPSF6-204ENST00000547486 SIAH2O43255 324 aa12□□□□□ -0.49
CPSF6-204ENST00000547486 PEX11AO75192 247 aa12□□□□□ -0.49
CPSF6-204ENST00000547486 AQP8O94778 261 aa12□□□□□ -0.49
CPSF6-204ENST00000547486 OXSR1O95747 527 aaPredicted RBP12□□□□□ -0.49
CPSF6-204ENST00000547486 CHEK2O96017 543 aa12□□□□□ -0.49
CPSF6-204ENST00000547486 OPN1LWP04000 364 aa12□□□□□ -0.49
CPSF6-204ENST00000547486 RAF1P04049 648 aa12□□□□□ -0.49
CPSF6-204ENST00000547486 NEFHP12036 1026 aa12□□□□□ -0.49
CPSF6-204ENST00000547486 TBXA2RP21731 343 aa12□□□□□ -0.49
CPSF6-204ENST00000547486 SLC6A8P48029 635 aa12□□□□□ -0.49
CPSF6-204ENST00000547486 VSNL1P62760 191 aa12□□□□□ -0.49
CPSF6-204ENST00000547486 SIRPAP78324 504 aa12□□□□□ -0.49
CPSF6-204ENST00000547486 FOXD4Q12950 439 aaPredicted RBP12□□□□□ -0.49
CPSF6-204ENST00000547486 GUSBP1Q15486 140 aa12□□□□□ -0.49
CPSF6-204ENST00000547486 DEFB113Q30KQ7 82 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms