RNA–Protein interactions for RNA: ENST00000547263.1

GCN1-202, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-202ENST00000547263 PNPLA3Q9NST1 481 aa9.94□□□□□ -0.82
GCN1-202ENST00000547263 PCNX1Q96RV3 2341 aa9.94□□□□□ -0.82
GCN1-202ENST00000547263 SPTBN1Q01082 2364 aaKnown RBP9.93□□□□□ -0.82
GCN1-202ENST00000547263 MED12Q93074 2177 aa9.93□□□□□ -0.82
GCN1-202ENST00000547263 UQCRHLA0A096LP55 91 aa9.93□□□□□ -0.82
GCN1-202ENST00000547263 FAM234BA2RU67 622 aa9.93□□□□□ -0.82
GCN1-202ENST00000547263 PRAMEF27A3QJZ7 478 aa9.93□□□□□ -0.82
GCN1-202ENST00000547263 DUXAA6NLW8 204 aa9.93□□□□□ -0.82
GCN1-202ENST00000547263 NPIPA2E9PIF3 369 aa9.93□□□□□ -0.82
GCN1-202ENST00000547263 NPIPA3F8WFD2 350 aa9.93□□□□□ -0.82
GCN1-202ENST00000547263 ACTL6AO96019 429 aa9.93□□□□□ -0.82
GCN1-202ENST00000547263 C1QCP02747 245 aa9.93□□□□□ -0.82
GCN1-202ENST00000547263 TPOP07202 933 aa9.93□□□□□ -0.82
GCN1-202ENST00000547263 GP1BBP13224 206 aa9.93□□□□□ -0.82
GCN1-202ENST00000547263 GABRA1P14867 456 aa9.93□□□□□ -0.82
GCN1-202ENST00000547263 BMP7P18075 431 aa9.93□□□□□ -0.82
GCN1-202ENST00000547263 CHMP24386 653 aa9.93□□□□□ -0.82
GCN1-202ENST00000547263 PTGER4P35408 488 aa9.93□□□□□ -0.82
GCN1-202ENST00000547263 ADH7P40394 386 aa9.93□□□□□ -0.82
GCN1-202ENST00000547263 CDKN2CP42773 168 aa9.93□□□□□ -0.82
GCN1-202ENST00000547263 AQP5P55064 265 aa9.93□□□□□ -0.82
GCN1-202ENST00000547263 CASP6P55212 293 aa9.93□□□□□ -0.82
GCN1-202ENST00000547263 DSCR4P56555 118 aaPredicted RBP9.93□□□□□ -0.82
GCN1-202ENST00000547263 C17orf67Q0P5P2 114 aa9.93□□□□□ -0.82
GCN1-202ENST00000547263 FUT5Q11128 374 aa9.93□□□□□ -0.82
GCN1-202ENST00000547263 ART3Q13508 389 aa9.93□□□□□ -0.82
GCN1-202ENST00000547263 TP53BP2Q13625 1128 aa9.93□□□□□ -0.82
GCN1-202ENST00000547263 GANABQ14697 944 aaKnown RBP9.93□□□□□ -0.82
GCN1-202ENST00000547263 ZNF141Q15928 474 aa9.93□□□□□ -0.82
GCN1-202ENST00000547263 ARHGAP11BQ3KRB8 267 aa9.93□□□□□ -0.82
GCN1-202ENST00000547263 EIPR1Q53HC9 387 aa9.93□□□□□ -0.82
GCN1-202ENST00000547263 DCST1Q5T197 706 aa9.93□□□□□ -0.82
GCN1-202ENST00000547263 DCST2Q5T1A1 773 aa9.93□□□□□ -0.82
GCN1-202ENST00000547263 FIGNL1Q6PIW4 674 aa9.93□□□□□ -0.82
GCN1-202ENST00000547263 XKRXQ6PP77 449 aa9.93□□□□□ -0.82
GCN1-202ENST00000547263 SEM1Q6ZVN7 128 aa9.93□□□□□ -0.82
GCN1-202ENST00000547263 ACAD11Q709F0 780 aa9.93□□□□□ -0.82
GCN1-202ENST00000547263 MAMDC2Q7Z304 686 aaPredicted RBP9.93□□□□□ -0.82
GCN1-202ENST00000547263 MISPQ8IVT2 679 aa9.93□□□□□ -0.82
GCN1-202ENST00000547263 MIER2Q8N344 545 aa9.93□□□□□ -0.82
GCN1-202ENST00000547263 RPRMLQ8N4K4 120 aa9.93□□□□□ -0.82
GCN1-202ENST00000547263 OR4A15Q8NGL6 344 aa9.93□□□□□ -0.82
GCN1-202ENST00000547263 FBXO30Q8TB52 745 aa9.93□□□□□ -0.82
GCN1-202ENST00000547263 ADAMTS15Q8TE58 950 aa9.93□□□□□ -0.82
GCN1-202ENST00000547263 DYDC1Q8WWB3 177 aa9.93□□□□□ -0.82
GCN1-202ENST00000547263 DTNBP1Q96EV8 351 aa9.93□□□□□ -0.82
GCN1-202ENST00000547263 WDYHV1Q96HA8 205 aa9.93□□□□□ -0.82
GCN1-202ENST00000547263 JSRP1Q96MG2 331 aaPredicted RBP9.93□□□□□ -0.82
GCN1-202ENST00000547263 OR52E6Q96RD3 313 aa9.93□□□□□ -0.82
GCN1-202ENST00000547263 YIPF4Q9BSR8 244 aa9.93□□□□□ -0.82
GCN1-202ENST00000547263 INPP5KQ9BT40 448 aa9.93□□□□□ -0.82
GCN1-202ENST00000547263 UGT2B28Q9BY64 529 aa9.93□□□□□ -0.82
GCN1-202ENST00000547263 NMUR2Q9GZQ4 415 aa9.93□□□□□ -0.82
GCN1-202ENST00000547263 POLE3Q9NRF9 147 aa9.93□□□□□ -0.82
GCN1-202ENST00000547263 SDHAF3Q9NRP4 125 aa9.93□□□□□ -0.82
GCN1-202ENST00000547263 SLC6A13Q9NSD5 602 aa9.93□□□□□ -0.82
GCN1-202ENST00000547263 SUCOQ9UBS9 1254 aaKnown RBP9.93□□□□□ -0.82
GCN1-202ENST00000547263 PCDHGB4Q9UN71 923 aa9.93□□□□□ -0.82
GCN1-202ENST00000547263 FAF1Q9UNN5 650 aaPredicted RBP9.93□□□□□ -0.82
GCN1-202ENST00000547263 KLF2Q9Y5W3 355 aaPredicted RBP9.93□□□□□ -0.82
GCN1-202ENST00000547263 SNX8Q9Y5X2 465 aa9.93□□□□□ -0.82
GCN1-202ENST00000547263 KIAA1549Q9HCM3 1950 aa9.93□□□□□ -0.82
GCN1-202ENST00000547263 CACNA1CQ13936 2221 aa9.92□□□□□ -0.82
GCN1-202ENST00000547263 COL12A1Q99715 3063 aa9.92□□□□□ -0.82
GCN1-202ENST00000547263 TRBV5-3A0A0A0MS03 114 aa9.92□□□□□ -0.82
GCN1-202ENST00000547263 C7orf72A4D263 438 aa9.92□□□□□ -0.82
GCN1-202ENST00000547263 FIGNL2A6NMB9 653 aa9.92□□□□□ -0.82
GCN1-202ENST00000547263 AHRRA9YTQ3 701 aa9.92□□□□□ -0.82
GCN1-202ENST00000547263 C9JVG2 144 aa9.92□□□□□ -0.82
GCN1-202ENST00000547263 ETV2O00321 342 aaPredicted RBP9.92□□□□□ -0.82
GCN1-202ENST00000547263 POLR3GO15318 223 aaPredicted RBP9.92□□□□□ -0.82
GCN1-202ENST00000547263 CFLARO15519 480 aa9.92□□□□□ -0.82
GCN1-202ENST00000547263 ANGPTL1O95841 491 aa9.92□□□□□ -0.82
GCN1-202ENST00000547263 AGR2O95994 175 aa9.92□□□□□ -0.82
GCN1-202ENST00000547263 BMP2P12643 396 aa9.92□□□□□ -0.82
GCN1-202ENST00000547263 MATN1P21941 496 aa9.92□□□□□ -0.82
GCN1-202ENST00000547263 PSMA4P25789 261 aaKnown RBP9.92□□□□□ -0.82
GCN1-202ENST00000547263 ACVR2AP27037 513 aa9.92□□□□□ -0.82
GCN1-202ENST00000547263 TRPC1P48995 793 aa9.92□□□□□ -0.82
GCN1-202ENST00000547263 LHX2P50458 406 aa9.92□□□□□ -0.82
GCN1-202ENST00000547263 POLR2JP52435 117 aaKnown RBP9.92□□□□□ -0.82
GCN1-202ENST00000547263 CDSNQ15517 529 aa9.92□□□□□ -0.82
GCN1-202ENST00000547263 MAPK11Q15759 364 aa9.92□□□□□ -0.82
GCN1-202ENST00000547263 CD226Q15762 336 aa9.92□□□□□ -0.82
GCN1-202ENST00000547263 BCL2A1Q16548 175 aa9.92□□□□□ -0.82
GCN1-202ENST00000547263 WIPI1Q5MNZ9 446 aaPredicted RBP9.92□□□□□ -0.82
GCN1-202ENST00000547263 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.92□□□□□ -0.82
GCN1-202ENST00000547263 LRIF1Q5T3J3 769 aa9.92□□□□□ -0.82
GCN1-202ENST00000547263 CCNJQ5T5M9 372 aa9.92□□□□□ -0.82
GCN1-202ENST00000547263 WLSQ5T9L3 541 aa9.92□□□□□ -0.82
GCN1-202ENST00000547263 NXNQ6DKJ4 435 aa9.92□□□□□ -0.82
GCN1-202ENST00000547263 TMEM211Q6ICI0 200 aa9.92□□□□□ -0.82
GCN1-202ENST00000547263 CGB2Q6NT52 195 aa9.92□□□□□ -0.82
GCN1-202ENST00000547263 BLOC1S3Q6QNY0 202 aa9.92□□□□□ -0.82
GCN1-202ENST00000547263 NCCRP1Q6ZVX7 275 aaPredicted RBP9.92□□□□□ -0.82
GCN1-202ENST00000547263 SZRD1Q7Z422 152 aa9.92□□□□□ -0.82
GCN1-202ENST00000547263 MTERF4Q7Z6M4 381 aaKnown RBP9.92□□□□□ -0.82
GCN1-202ENST00000547263 MARCH3Q86UD3 253 aa9.92□□□□□ -0.82
GCN1-202ENST00000547263 ULK2Q8IYT8 1036 aa9.92□□□□□ -0.82
GCN1-202ENST00000547263 CLEC4FQ8N1N0 589 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms