RNA–Protein interactions for RNA: ENST00000545998.1

HMGA2-211, Transcript of high mobility group AT-hook 2, humanhuman

TSL 1 (best)

Gene HMGA2, Length 1,584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-211ENST00000545998 ROPN1LQ96C74 230 aa18.71■□□□□ 0.59
HMGA2-211ENST00000545998 CGREF1Q99674 301 aa18.71■□□□□ 0.59
HMGA2-211ENST00000545998 CPPED1Q9BRF8 314 aaPredicted RBP18.71■□□□□ 0.59
HMGA2-211ENST00000545998 TSPAN10Q9H1Z9 355 aaPredicted RBP18.71■□□□□ 0.59
HMGA2-211ENST00000545998 IKZF5Q9H5V7 419 aa18.71■□□□□ 0.59
HMGA2-211ENST00000545998 NIPSNAP3AQ9UFN0 247 aaPredicted RBP18.71■□□□□ 0.59
HMGA2-211ENST00000545998 LIPT1Q9Y234 373 aa18.71■□□□□ 0.59
HMGA2-211ENST00000545998 POLEQ07864 2286 aa18.71■□□□□ 0.59
HMGA2-211ENST00000545998 ALG1L2C9J202 215 aa18.7■□□□□ 0.58
HMGA2-211ENST00000545998 NPIPB9F8W1W9 429 aa18.7■□□□□ 0.58
HMGA2-211ENST00000545998 ACOT7O00154 380 aa18.7■□□□□ 0.58
HMGA2-211ENST00000545998 SNPHO15079 494 aa18.7■□□□□ 0.58
HMGA2-211ENST00000545998 SCO2O43819 266 aa18.7■□□□□ 0.58
HMGA2-211ENST00000545998 FCMRO60667 390 aa18.7■□□□□ 0.58
HMGA2-211ENST00000545998 MASP1P48740 699 aa18.7■□□□□ 0.58
HMGA2-211ENST00000545998 CLK3P49761 638 aaKnown RBP18.7■□□□□ 0.58
HMGA2-211ENST00000545998 FOXK1P85037 733 aa18.7■□□□□ 0.58
HMGA2-211ENST00000545998 FADDQ13158 208 aa18.7■□□□□ 0.58
HMGA2-211ENST00000545998 STX5Q13190 355 aa18.7■□□□□ 0.58
HMGA2-211ENST00000545998 IGFBP7Q16270 282 aa18.7■□□□□ 0.58
HMGA2-211ENST00000545998 SYPL1Q16563 259 aa18.7■□□□□ 0.58
HMGA2-211ENST00000545998 TRMT5Q32P41 509 aaKnown RBP18.7■□□□□ 0.58
HMGA2-211ENST00000545998 MMEL1Q495T6 779 aa18.7■□□□□ 0.58
HMGA2-211ENST00000545998 GKAP1Q5VSY0 366 aaPredicted RBP18.7■□□□□ 0.58
HMGA2-211ENST00000545998 BNC2Q6ZN30 1099 aaPredicted RBP18.7■□□□□ 0.58
HMGA2-211ENST00000545998 OLIG3Q7RTU3 272 aa18.7■□□□□ 0.58
HMGA2-211ENST00000545998 MARCH3Q86UD3 253 aa18.7■□□□□ 0.58
HMGA2-211ENST00000545998 POU5F2Q8N7G0 328 aa18.7■□□□□ 0.58
HMGA2-211ENST00000545998 WDSUB1Q8N9V3 476 aa18.7■□□□□ 0.58
HMGA2-211ENST00000545998 ANKRD27Q96NW4 1050 aa18.7■□□□□ 0.58
HMGA2-211ENST00000545998 GNRHR2Q96P88 292 aa18.7■□□□□ 0.58
HMGA2-211ENST00000545998 TRNT1Q96Q11 434 aaKnown RBP18.7■□□□□ 0.58
HMGA2-211ENST00000545998 HOXD1Q9GZZ0 328 aa18.7■□□□□ 0.58
HMGA2-211ENST00000545998 ZNF703Q9H7S9 590 aaPredicted RBP18.7■□□□□ 0.58
HMGA2-211ENST00000545998 ZDHHC11Q9H8X9 412 aa18.7■□□□□ 0.58
HMGA2-211ENST00000545998 HRH3Q9Y5N1 445 aa18.7■□□□□ 0.58
HMGA2-211ENST00000545998 FLNCQ14315 2725 aa18.7■□□□□ 0.58
HMGA2-211ENST00000545998 NPIPA5E9PKD4 350 aa18.69■□□□□ 0.58
HMGA2-211ENST00000545998 GNB5O14775 395 aa18.69■□□□□ 0.58
HMGA2-211ENST00000545998 MRASO14807 208 aa18.69■□□□□ 0.58
HMGA2-211ENST00000545998 BMP2P12643 396 aa18.69■□□□□ 0.58
HMGA2-211ENST00000545998 COX4I1P13073 169 aa18.69■□□□□ 0.58
HMGA2-211ENST00000545998 EDN3P14138 238 aa18.69■□□□□ 0.58
HMGA2-211ENST00000545998 ELAVL4P26378 380 aaKnown RBP18.69■□□□□ 0.58
HMGA2-211ENST00000545998 DCTP40126 519 aa18.69■□□□□ 0.58
HMGA2-211ENST00000545998 ATP12AP54707 1039 aa18.69■□□□□ 0.58
HMGA2-211ENST00000545998 DSTNP60981 165 aa18.69■□□□□ 0.58
HMGA2-211ENST00000545998 CMPK2Q5EBM0 449 aa18.69■□□□□ 0.58
HMGA2-211ENST00000545998 ANKFN1Q8N957 763 aa18.69■□□□□ 0.58
HMGA2-211ENST00000545998 OR1J4Q8NGS1 313 aa18.69■□□□□ 0.58
HMGA2-211ENST00000545998 GPR137Q96N19 417 aa18.69■□□□□ 0.58
HMGA2-211ENST00000545998 TBL1XR1Q9BZK7 514 aa18.69■□□□□ 0.58
HMGA2-211ENST00000545998 SAP130Q9H0E3 1048 aa18.69■□□□□ 0.58
HMGA2-211ENST00000545998 UBQLN3Q9H347 655 aa18.69■□□□□ 0.58
HMGA2-211ENST00000545998 POLE3Q9NRF9 147 aa18.69■□□□□ 0.58
HMGA2-211ENST00000545998 THUMPD1Q9NXG2 353 aaKnown RBP18.69■□□□□ 0.58
HMGA2-211ENST00000545998 MKLN1Q9UL63 735 aa18.69■□□□□ 0.58
HMGA2-211ENST00000545998 NPIPA1Q9UND3 350 aa18.69■□□□□ 0.58
HMGA2-211ENST00000545998 C15orf41Q9Y2V0 281 aa18.69■□□□□ 0.58
HMGA2-211ENST00000545998 GTF3C1Q12789 2109 aa18.69■□□□□ 0.58
HMGA2-211ENST00000545998 NPIPA5A0A0B4J1W7 369 aa18.68■□□□□ 0.58
HMGA2-211ENST00000545998 C17orf51A8MQB3 221 aa18.68■□□□□ 0.58
HMGA2-211ENST00000545998 B4DXG7 233 aa18.68■□□□□ 0.58
HMGA2-211ENST00000545998 NPIPA7E9PJI5 369 aa18.68■□□□□ 0.58
HMGA2-211ENST00000545998 SCDO00767 359 aa18.68■□□□□ 0.58
HMGA2-211ENST00000545998 KIAA0513O60268 411 aa18.68■□□□□ 0.58
HMGA2-211ENST00000545998 TNFRSF21O75509 655 aa18.68■□□□□ 0.58
HMGA2-211ENST00000545998 H6PDO95479 791 aa18.68■□□□□ 0.58
HMGA2-211ENST00000545998 NPPAP01160 153 aa18.68■□□□□ 0.58
HMGA2-211ENST00000545998 NPIPA8P0DM63 369 aa18.68■□□□□ 0.58
HMGA2-211ENST00000545998 MAGEA5P43359 124 aa18.68■□□□□ 0.58
HMGA2-211ENST00000545998 MAPK11Q15759 364 aa18.68■□□□□ 0.58
HMGA2-211ENST00000545998 GPAT3Q53EU6 434 aa18.68■□□□□ 0.58
HMGA2-211ENST00000545998 TYW3Q6IPR3 259 aaKnown RBP18.68■□□□□ 0.58
HMGA2-211ENST00000545998 FRRS1Q6ZNA5 592 aa18.68■□□□□ 0.58
HMGA2-211ENST00000545998 C10orf111Q8N326 155 aa18.68■□□□□ 0.58
HMGA2-211ENST00000545998 FAM109AQ8N4B1 249 aa18.68■□□□□ 0.58
HMGA2-211ENST00000545998 LRRC58Q96CX6 371 aa18.68■□□□□ 0.58
HMGA2-211ENST00000545998 P2RX2Q9UBL9 471 aa18.68■□□□□ 0.58
HMGA2-211ENST00000545998 CORO2BQ9UQ03 480 aa18.68■□□□□ 0.58
HMGA2-211ENST00000545998 WDR45Q9Y484 360 aa18.68■□□□□ 0.58
HMGA2-211ENST00000545998 A0A1W2PQD3 144 aa18.68■□□□□ 0.58
HMGA2-211ENST00000545998 EVPLLA8MZ36 301 aa18.68■□□□□ 0.58
HMGA2-211ENST00000545998 FXYD1O00168 92 aa18.68■□□□□ 0.58
HMGA2-211ENST00000545998 DCTN3O75935 186 aa18.68■□□□□ 0.58
HMGA2-211ENST00000545998 ANGPTL1O95841 491 aa18.68■□□□□ 0.58
HMGA2-211ENST00000545998 CHRM4P08173 479 aa18.68■□□□□ 0.58
HMGA2-211ENST00000545998 NUDT7P0C024 238 aa18.68■□□□□ 0.58
HMGA2-211ENST00000545998 TFPTP0C1Z6 253 aa18.68■□□□□ 0.58
HMGA2-211ENST00000545998 PLA2G2AP14555 144 aa18.68■□□□□ 0.58
HMGA2-211ENST00000545998 HPGDP15428 266 aa18.68■□□□□ 0.58
HMGA2-211ENST00000545998 GPX2P18283 190 aa18.68■□□□□ 0.58
HMGA2-211ENST00000545998 CAPRIN1Q14444 709 aaKnown RBP18.68■□□□□ 0.58
HMGA2-211ENST00000545998 ESPL1Q14674 2120 aa18.68■□□□□ 0.58
HMGA2-211ENST00000545998 GPR68Q15743 365 aa18.68■□□□□ 0.58
HMGA2-211ENST00000545998 KLHL26Q53HC5 615 aa18.68■□□□□ 0.58
HMGA2-211ENST00000545998 KRTCAP3Q53RY4 240 aa18.68■□□□□ 0.58
HMGA2-211ENST00000545998 OR5M10Q6IEU7 315 aa18.68■□□□□ 0.58
HMGA2-211ENST00000545998 PLCZ1Q86YW0 608 aa18.68■□□□□ 0.58
HMGA2-211ENST00000545998 ZNF527Q8NB42 609 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms