RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 APOBEC3BQ9UH17 382 aaKnown RBP2.96□□□□□ -1.94
SNHG1-224ENST00000545688 CCPG1Q9ULG6 757 aa2.96□□□□□ -1.94
SNHG1-224ENST00000545688 ATG4BQ9Y4P1 393 aa2.96□□□□□ -1.94
SNHG1-224ENST00000545688 ZFP37Q9Y6Q3 630 aaPredicted RBP2.96□□□□□ -1.94
SNHG1-224ENST00000545688 CEP250Q9BV73 2442 aa2.95□□□□□ -1.94
SNHG1-224ENST00000545688 ELP1O95163 1332 aa2.95□□□□□ -1.94
SNHG1-224ENST00000545688 AK9Q5TCS8 1911 aa2.95□□□□□ -1.94
SNHG1-224ENST00000545688 WDR87Q6ZQQ6 2873 aa2.95□□□□□ -1.94
SNHG1-224ENST00000545688 DOCK1Q14185 1865 aa2.95□□□□□ -1.94
SNHG1-224ENST00000545688 PLXNA1Q9UIW2 1896 aa2.95□□□□□ -1.94
SNHG1-224ENST00000545688 IGLV8-61A0A075B6I0 122 aa2.95□□□□□ -1.94
SNHG1-224ENST00000545688 SDR42E2A6NKP2 422 aa2.95□□□□□ -1.94
SNHG1-224ENST00000545688 B4DXG7 233 aa2.95□□□□□ -1.94
SNHG1-224ENST00000545688 SLC33A1O00400 549 aaPredicted RBP2.95□□□□□ -1.94
SNHG1-224ENST00000545688 WDR46O15213 610 aaKnown RBP2.95□□□□□ -1.94
SNHG1-224ENST00000545688 GLCEO94923 617 aa2.95□□□□□ -1.94
SNHG1-224ENST00000545688 PGK1P00558 417 aa2.95□□□□□ -1.94
SNHG1-224ENST00000545688 NUDT17P0C025 328 aa2.95□□□□□ -1.94
SNHG1-224ENST00000545688 TPBGLP0DKB5 382 aa2.95□□□□□ -1.94
SNHG1-224ENST00000545688 C8orf89P0DMQ9 161 aa2.95□□□□□ -1.94
SNHG1-224ENST00000545688 MBL2P11226 248 aaPredicted RBP2.95□□□□□ -1.94
SNHG1-224ENST00000545688 IL9P15248 144 aa2.95□□□□□ -1.94
SNHG1-224ENST00000545688 ACP1P24666 158 aa2.95□□□□□ -1.94
SNHG1-224ENST00000545688 EFNA3P52797 238 aa2.95□□□□□ -1.94
SNHG1-224ENST00000545688 CCNA1P78396 465 aa2.95□□□□□ -1.94
SNHG1-224ENST00000545688 IRX3P78415 501 aaPredicted RBP2.95□□□□□ -1.94
SNHG1-224ENST00000545688 MECOMQ03112 1051 aa2.95□□□□□ -1.94
SNHG1-224ENST00000545688 SHROOM1Q2M3G4 852 aaPredicted RBP2.95□□□□□ -1.94
SNHG1-224ENST00000545688 CCDC57Q2TAC2 916 aa2.95□□□□□ -1.94
SNHG1-224ENST00000545688 CAVIN4Q5BKX8 364 aa2.95□□□□□ -1.94
SNHG1-224ENST00000545688 OTPQ5XKR4 325 aa2.95□□□□□ -1.94
SNHG1-224ENST00000545688 STEAP1BQ6NZ63 245 aa2.95□□□□□ -1.94
SNHG1-224ENST00000545688 Q6P435 159 aa2.95□□□□□ -1.94
SNHG1-224ENST00000545688 DCLRE1AQ6PJP8 1040 aa2.95□□□□□ -1.94
SNHG1-224ENST00000545688 GLRX5Q86SX6 157 aa2.95□□□□□ -1.94
SNHG1-224ENST00000545688 TRIM9Q9C026 710 aa2.95□□□□□ -1.94
SNHG1-224ENST00000545688 UBE2ZQ9H832 354 aaPredicted RBP2.95□□□□□ -1.94
SNHG1-224ENST00000545688 VPS18Q9P253 973 aa2.95□□□□□ -1.94
SNHG1-224ENST00000545688 GIMAP2Q9UG22 337 aa2.95□□□□□ -1.94
SNHG1-224ENST00000545688 LRRC37A2A6NM11 1700 aa2.95□□□□□ -1.94
SNHG1-224ENST00000545688 SPEF2Q9C093 1822 aa2.95□□□□□ -1.94
SNHG1-224ENST00000545688 ZNF292O60281 2723 aa2.95□□□□□ -1.94
SNHG1-224ENST00000545688 GPR179Q6PRD1 2367 aa2.95□□□□□ -1.94
SNHG1-224ENST00000545688 GRIN2DO15399 1336 aa2.94□□□□□ -1.94
SNHG1-224ENST00000545688 SPTBN2O15020 2390 aa2.94□□□□□ -1.94
SNHG1-224ENST00000545688 ZNF236Q9UL36 1845 aa2.94□□□□□ -1.94
SNHG1-224ENST00000545688 MFSD2BA6NFX1 497 aa2.94□□□□□ -1.94
SNHG1-224ENST00000545688 OOEPA6NGQ2 149 aa2.94□□□□□ -1.94
SNHG1-224ENST00000545688 G3V3Y1 287 aa2.94□□□□□ -1.94
SNHG1-224ENST00000545688 PDXKO00764 312 aa2.94□□□□□ -1.94
SNHG1-224ENST00000545688 SERF1AO75920 110 aa2.94□□□□□ -1.94
SNHG1-224ENST00000545688 SLC2A10O95528 541 aa2.94□□□□□ -1.94
SNHG1-224ENST00000545688 OAS1P00973 400 aaKnown RBP2.94□□□□□ -1.94
SNHG1-224ENST00000545688 GH1P01241 217 aa2.94□□□□□ -1.94
SNHG1-224ENST00000545688 CA3P07451 260 aa2.94□□□□□ -1.94
SNHG1-224ENST00000545688 CT45A8P0DMV1 189 aa2.94□□□□□ -1.94
SNHG1-224ENST00000545688 CT45A9P0DMV2 189 aa2.94□□□□□ -1.94
SNHG1-224ENST00000545688 PTPN4P29074 926 aa2.94□□□□□ -1.94
SNHG1-224ENST00000545688 ACLYP53396 1101 aa2.94□□□□□ -1.94
SNHG1-224ENST00000545688 ZNF33BQ06732 778 aa2.94□□□□□ -1.94
SNHG1-224ENST00000545688 CT45A2Q5DJT8 189 aa2.94□□□□□ -1.94
SNHG1-224ENST00000545688 DDI2Q5TDH0 399 aa2.94□□□□□ -1.94
SNHG1-224ENST00000545688 SCARA5Q6ZMJ2 495 aa2.94□□□□□ -1.94
SNHG1-224ENST00000545688 ADAMTSL5Q6ZMM2 481 aa2.94□□□□□ -1.94
SNHG1-224ENST00000545688 RNF175Q8N4F7 328 aa2.94□□□□□ -1.94
SNHG1-224ENST00000545688 Q8N9L7 120 aa2.94□□□□□ -1.94
SNHG1-224ENST00000545688 CCDC26Q8TAB7 109 aa2.94□□□□□ -1.94
SNHG1-224ENST00000545688 PHOSPHO2Q8TCD6 241 aa2.94□□□□□ -1.94
SNHG1-224ENST00000545688 TFB1MQ8WVM0 346 aaKnown RBP2.94□□□□□ -1.94
SNHG1-224ENST00000545688 CXorf58Q96LI9 332 aa2.94□□□□□ -1.94
SNHG1-224ENST00000545688 C9orf85Q96MD7 179 aa2.94□□□□□ -1.94
SNHG1-224ENST00000545688 SPAG8Q99932 426 aaPredicted RBP2.94□□□□□ -1.94
SNHG1-224ENST00000545688 FAM173AQ9BQD7 235 aa2.94□□□□□ -1.94
SNHG1-224ENST00000545688 EDEM3Q9BZQ6 932 aa2.94□□□□□ -1.94
SNHG1-224ENST00000545688 ZNF702PQ9H963 129 aa2.94□□□□□ -1.94
SNHG1-224ENST00000545688 DPM3Q9P2X0 92 aa2.94□□□□□ -1.94
SNHG1-224ENST00000545688 FBXL5Q9UKA1 691 aa2.94□□□□□ -1.94
SNHG1-224ENST00000545688 MRTO4Q9UKD2 239 aaKnown RBP2.94□□□□□ -1.94
SNHG1-224ENST00000545688 RNF115Q9Y4L5 304 aa2.94□□□□□ -1.94
SNHG1-224ENST00000545688 FRYLO94915 3013 aa2.94□□□□□ -1.94
SNHG1-224ENST00000545688 MROH7Q68CQ1 1323 aa2.93□□□□□ -1.94
SNHG1-224ENST00000545688 SYNRGQ9UMZ2 1314 aa2.93□□□□□ -1.94
SNHG1-224ENST00000545688 OTOGLQ3ZCN5 2332 aa2.93□□□□□ -1.94
SNHG1-224ENST00000545688 USP24Q9UPU5 2620 aa2.93□□□□□ -1.94
SNHG1-224ENST00000545688 ARHGAP21Q5T5U3 1957 aa2.93□□□□□ -1.94
SNHG1-224ENST00000545688 A0A0A6YYD4 124 aa2.93□□□□□ -1.94
SNHG1-224ENST00000545688 EMC8O43402 210 aa2.93□□□□□ -1.94
SNHG1-224ENST00000545688 SNAI1O95863 264 aaPredicted RBP2.93□□□□□ -1.94
SNHG1-224ENST00000545688 SLC16A8O95907 504 aa2.93□□□□□ -1.94
SNHG1-224ENST00000545688 FCER2P06734 321 aa2.93□□□□□ -1.94
SNHG1-224ENST00000545688 WNT2P09544 360 aa2.93□□□□□ -1.94
SNHG1-224ENST00000545688 ALPIP09923 528 aa2.93□□□□□ -1.94
SNHG1-224ENST00000545688 CT45A10P0DMU9 189 aa2.93□□□□□ -1.94
SNHG1-224ENST00000545688 PSMB1P20618 241 aaKnown RBP2.93□□□□□ -1.94
SNHG1-224ENST00000545688 TRIM23P36406 574 aa2.93□□□□□ -1.94
SNHG1-224ENST00000545688 NBL1P41271 181 aa2.93□□□□□ -1.94
SNHG1-224ENST00000545688 BTDP43251 543 aa2.93□□□□□ -1.94
SNHG1-224ENST00000545688 NT5C2P49902 561 aa2.93□□□□□ -1.94
SNHG1-224ENST00000545688 HNRNPA3P51991 378 aaKnown RBP2.93□□□□□ -1.94
SNHG1-224ENST00000545688 ZNF131P52739 623 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms