RNA–Protein interactions for RNA: ENST00000545432.5

RTN3-214, Transcript of reticulon 3, humanhuman

TSL 4

Gene RTN3, Length 545 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-214ENST00000545432 SLC12A4Q9UP95 1085 aa13.09□□□□□ -0.31
RTN3-214ENST00000545432 A0A087WZY1 265 aa13.08□□□□□ -0.32
RTN3-214ENST00000545432 FAM234BA2RU67 622 aa13.08□□□□□ -0.32
RTN3-214ENST00000545432 STX16-NPEPL1H3BU86 382 aa13.08□□□□□ -0.32
RTN3-214ENST00000545432 STX16O14662 325 aa13.08□□□□□ -0.32
RTN3-214ENST00000545432 CXCL13O43927 109 aa13.08□□□□□ -0.32
RTN3-214ENST00000545432 PDYNP01213 254 aa13.08□□□□□ -0.32
RTN3-214ENST00000545432 IGHV4-31P0DP07 118 aa13.08□□□□□ -0.32
RTN3-214ENST00000545432 SLC25A16P16260 332 aa13.08□□□□□ -0.32
RTN3-214ENST00000545432 CASP9P55211 416 aa13.08□□□□□ -0.32
RTN3-214ENST00000545432 FAPQ12884 760 aa13.08□□□□□ -0.32
RTN3-214ENST00000545432 P2RY6Q15077 328 aa13.08□□□□□ -0.32
RTN3-214ENST00000545432 CYB5R2Q6BCY4 276 aa13.08□□□□□ -0.32
RTN3-214ENST00000545432 ESPNLQ6ZVH7 1005 aa13.08□□□□□ -0.32
RTN3-214ENST00000545432 CREG2Q8IUH2 290 aa13.08□□□□□ -0.32
RTN3-214ENST00000545432 KLHL7Q8IXQ5 586 aa13.08□□□□□ -0.32
RTN3-214ENST00000545432 OR2V1Q8NHB1 315 aa13.08□□□□□ -0.32
RTN3-214ENST00000545432 ATP6V1E2Q96A05 226 aa13.08□□□□□ -0.32
RTN3-214ENST00000545432 MTBPQ96DY7 904 aa13.08□□□□□ -0.32
RTN3-214ENST00000545432 SHCBP1LQ9BZQ2 653 aa13.08□□□□□ -0.32
RTN3-214ENST00000545432 SHARPINQ9H0F6 387 aa13.08□□□□□ -0.32
RTN3-214ENST00000545432 FARSBQ9NSD9 589 aaKnown RBP13.08□□□□□ -0.32
RTN3-214ENST00000545432 XPR1Q9UBH6 696 aa13.08□□□□□ -0.32
RTN3-214ENST00000545432 MCM8Q9UJA3 840 aa13.08□□□□□ -0.32
RTN3-214ENST00000545432 SNX24Q9Y343 169 aa13.08□□□□□ -0.32
RTN3-214ENST00000545432 MALRD1Q5VYJ5 2156 aa13.08□□□□□ -0.32
RTN3-214ENST00000545432 A0A0J9YW62 118 aa13.07□□□□□ -0.32
RTN3-214ENST00000545432 SHISA8B8ZZ34 492 aa13.07□□□□□ -0.32
RTN3-214ENST00000545432 LMX1BO60663 402 aa13.07□□□□□ -0.32
RTN3-214ENST00000545432 RAMP1O60894 148 aa13.07□□□□□ -0.32
RTN3-214ENST00000545432 SLITRK5O94991 958 aa13.07□□□□□ -0.32
RTN3-214ENST00000545432 TCP1P17987 556 aaKnown RBP13.07□□□□□ -0.32
RTN3-214ENST00000545432 IRX1P78414 480 aaPredicted RBP13.07□□□□□ -0.32
RTN3-214ENST00000545432 RUNX1T1Q06455 604 aa13.07□□□□□ -0.32
RTN3-214ENST00000545432 NAB1Q13506 487 aa13.07□□□□□ -0.32
RTN3-214ENST00000545432 TECRLQ5HYJ1 363 aa13.07□□□□□ -0.32
RTN3-214ENST00000545432 TTC19Q6DKK2 380 aaPredicted RBP13.07□□□□□ -0.32
RTN3-214ENST00000545432 SSX8Q7RTT4 187 aa13.07□□□□□ -0.32
RTN3-214ENST00000545432 NUFIP2Q7Z417 695 aaKnown RBP13.07□□□□□ -0.32
RTN3-214ENST00000545432 CTAGE3PQ8IX95 158 aa13.07□□□□□ -0.32
RTN3-214ENST00000545432 C1orf52Q8N6N3 182 aaKnown RBP13.07□□□□□ -0.32
RTN3-214ENST00000545432 PPM1NQ8N819 430 aa13.07□□□□□ -0.32
RTN3-214ENST00000545432 OR4F6Q8NGB9 312 aa13.07□□□□□ -0.32
RTN3-214ENST00000545432 ACTRT2Q8TDY3 377 aa13.07□□□□□ -0.32
RTN3-214ENST00000545432 RNF128Q8TEB7 428 aa13.07□□□□□ -0.32
RTN3-214ENST00000545432 PROX1Q92786 737 aa13.07□□□□□ -0.32
RTN3-214ENST00000545432 HOXB13Q92826 284 aaPredicted RBP13.07□□□□□ -0.32
RTN3-214ENST00000545432 NSUN5Q96P11 429 aaKnown RBP13.07□□□□□ -0.32
RTN3-214ENST00000545432 NPAS1Q99742 590 aa13.07□□□□□ -0.32
RTN3-214ENST00000545432 POTEKPQ9BYX7 375 aa13.07□□□□□ -0.32
RTN3-214ENST00000545432 TRIM31Q9BZY9 425 aa13.07□□□□□ -0.32
RTN3-214ENST00000545432 ALG2Q9H553 416 aa13.07□□□□□ -0.32
RTN3-214ENST00000545432 ELOVL6Q9H5J4 265 aa13.07□□□□□ -0.32
RTN3-214ENST00000545432 HHATLQ9HCP6 504 aa13.07□□□□□ -0.32
RTN3-214ENST00000545432 SLC35C2Q9NQQ7 365 aa13.07□□□□□ -0.32
RTN3-214ENST00000545432 FAIMQ9NVQ4 179 aa13.07□□□□□ -0.32
RTN3-214ENST00000545432 NMRK1Q9NWW6 199 aa13.07□□□□□ -0.32
RTN3-214ENST00000545432 ZNF225Q9UK10 706 aa13.07□□□□□ -0.32
RTN3-214ENST00000545432 C19orf53Q9UNZ5 99 aaPredicted RBP13.07□□□□□ -0.32
RTN3-214ENST00000545432 OR10H1Q9Y4A9 318 aa13.07□□□□□ -0.32
RTN3-214ENST00000545432 MYO1GB0I1T2 1018 aa13.06□□□□□ -0.32
RTN3-214ENST00000545432 ZNF814B7Z6K7 855 aa13.06□□□□□ -0.32
RTN3-214ENST00000545432 ALG1L2C9J202 215 aa13.06□□□□□ -0.32
RTN3-214ENST00000545432 DLX3O60479 287 aa13.06□□□□□ -0.32
RTN3-214ENST00000545432 COQ9O75208 318 aa13.06□□□□□ -0.32
RTN3-214ENST00000545432 SYNGR4O95473 234 aa13.06□□□□□ -0.32
RTN3-214ENST00000545432 ANGPTL1O95841 491 aa13.06□□□□□ -0.32
RTN3-214ENST00000545432 PGRP06401 933 aa13.06□□□□□ -0.32
RTN3-214ENST00000545432 IFI6P09912 130 aa13.06□□□□□ -0.32
RTN3-214ENST00000545432 PABPC4LP0CB38 370 aaKnown RBP13.06□□□□□ -0.32
RTN3-214ENST00000545432 IGFBP5P24593 272 aa13.06□□□□□ -0.32
RTN3-214ENST00000545432 MPIP34949 423 aa13.06□□□□□ -0.32
RTN3-214ENST00000545432 MAP3K8P41279 467 aa13.06□□□□□ -0.32
RTN3-214ENST00000545432 ALDH9A1P49189 494 aa13.06□□□□□ -0.32
RTN3-214ENST00000545432 CLK3P49761 638 aaKnown RBP13.06□□□□□ -0.32
RTN3-214ENST00000545432 RAE1P78406 368 aaKnown RBP13.06□□□□□ -0.32
RTN3-214ENST00000545432 STX5Q13190 355 aa13.06□□□□□ -0.32
RTN3-214ENST00000545432 ITGADQ13349 1161 aa13.06□□□□□ -0.32
RTN3-214ENST00000545432 TSC22D1Q15714 1073 aa13.06□□□□□ -0.32
RTN3-214ENST00000545432 DECR1Q16698 335 aa13.06□□□□□ -0.32
RTN3-214ENST00000545432 CPTPQ5TA50 214 aa13.06□□□□□ -0.32
RTN3-214ENST00000545432 LGSNQ5TDP6 509 aa13.06□□□□□ -0.32
RTN3-214ENST00000545432 AGAP6Q5VW22 663 aa13.06□□□□□ -0.32
RTN3-214ENST00000545432 GALNT18Q6P9A2 607 aa13.06□□□□□ -0.32
RTN3-214ENST00000545432 CLEC2AQ6UVW9 174 aa13.06□□□□□ -0.32
RTN3-214ENST00000545432 TDRPQ86YL5 185 aa13.06□□□□□ -0.32
RTN3-214ENST00000545432 ARIH2OSQ8N7S6 290 aa13.06□□□□□ -0.32
RTN3-214ENST00000545432 PTGR2Q8N8N7 351 aaPredicted RBP13.06□□□□□ -0.32
RTN3-214ENST00000545432 OSTF1Q92882 214 aa13.06□□□□□ -0.32
RTN3-214ENST00000545432 ZBTB8AQ96BR9 441 aa13.06□□□□□ -0.32
RTN3-214ENST00000545432 RADILQ96JH8 1075 aa13.06□□□□□ -0.32
RTN3-214ENST00000545432 ADAD1Q96M93 576 aaKnown RBP13.06□□□□□ -0.32
RTN3-214ENST00000545432 LMF2Q9BU23 707 aaKnown RBP13.06□□□□□ -0.32
RTN3-214ENST00000545432 C1QTNF3Q9BXJ4 246 aa13.06□□□□□ -0.32
RTN3-214ENST00000545432 SIRT5Q9NXA8 310 aa13.06□□□□□ -0.32
RTN3-214ENST00000545432 TAS2R7Q9NYW3 318 aa13.06□□□□□ -0.32
RTN3-214ENST00000545432 VPS29Q9UBQ0 182 aa13.06□□□□□ -0.32
RTN3-214ENST00000545432 TMCO1Q9UM00 188 aa13.06□□□□□ -0.32
RTN3-214ENST00000545432 TTC36A6NLP5 189 aa13.05□□□□□ -0.32
RTN3-214ENST00000545432 CCDC188H7C350 402 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms