RNA–Protein interactions for RNA: ENST00000545425.2

FOXA1-202, Transcript of forkhead box A1, humanhuman

TSL 2

Gene FOXA1, Length 1,806 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-202ENST00000545425 TANGO2Q6ICL3 276 aa21.7■■□□□ 1.06
FOXA1-202ENST00000545425 FRRS1Q6ZNA5 592 aa21.7■■□□□ 1.06
FOXA1-202ENST00000545425 GDF7Q7Z4P5 450 aa21.7■■□□□ 1.06
FOXA1-202ENST00000545425 SLC43A2Q8N370 569 aa21.7■■□□□ 1.06
FOXA1-202ENST00000545425 GANCQ8TET4 914 aa21.7■■□□□ 1.06
FOXA1-202ENST00000545425 SLC35A4Q96G79 324 aa21.7■■□□□ 1.06
FOXA1-202ENST00000545425 FAM46AQ96IP4 442 aaKnown RBP21.7■■□□□ 1.06
FOXA1-202ENST00000545425 SOSTQ9BQB4 213 aa21.7■■□□□ 1.06
FOXA1-202ENST00000545425 MIR1-1HGQ9H1L0 117 aa21.7■■□□□ 1.06
FOXA1-202ENST00000545425 PCOLCE2Q9UKZ9 415 aa21.7■■□□□ 1.06
FOXA1-202ENST00000545425 SATB2Q9UPW6 733 aa21.7■■□□□ 1.06
FOXA1-202ENST00000545425 KCNE3Q9Y6H6 103 aa21.7■■□□□ 1.06
FOXA1-202ENST00000545425 A0A1W2PQU0 124 aa21.69■■□□□ 1.06
FOXA1-202ENST00000545425 ISM1B1AKI9 464 aa21.69■■□□□ 1.06
FOXA1-202ENST00000545425 RNF144AP50876 292 aaPredicted RBP21.69■■□□□ 1.06
FOXA1-202ENST00000545425 BTN3A2P78410 334 aa21.69■■□□□ 1.06
FOXA1-202ENST00000545425 TRAM1Q15629 374 aa21.69■■□□□ 1.06
FOXA1-202ENST00000545425 FLYWCH1Q4VC44 716 aa21.69■■□□□ 1.06
FOXA1-202ENST00000545425 USP53Q70EK8 1073 aa21.69■■□□□ 1.06
FOXA1-202ENST00000545425 OR4K14Q8NGD5 310 aa21.69■■□□□ 1.06
FOXA1-202ENST00000545425 LCN9Q8WX39 176 aa21.69■■□□□ 1.06
FOXA1-202ENST00000545425 GATAD2BQ8WXI9 593 aa21.69■■□□□ 1.06
FOXA1-202ENST00000545425 PHOX2BQ99453 314 aa21.69■■□□□ 1.06
FOXA1-202ENST00000545425 KCNN2Q9H2S1 579 aa21.69■■□□□ 1.06
FOXA1-202ENST00000545425 TPK1Q9H3S4 243 aa21.69■■□□□ 1.06
FOXA1-202ENST00000545425 TMEM5Q9Y2B1 443 aa21.69■■□□□ 1.06
FOXA1-202ENST00000545425 CARD8Q9Y2G2 431 aa21.69■■□□□ 1.06
FOXA1-202ENST00000545425 SLC19A2O60779 497 aa21.69■■□□□ 1.06
FOXA1-202ENST00000545425 C2orf27AQ580R0 203 aa21.69■■□□□ 1.06
FOXA1-202ENST00000545425 OR2G6Q5TZ20 316 aa21.69■■□□□ 1.06
FOXA1-202ENST00000545425 MZT2BQ6NZ67 158 aa21.69■■□□□ 1.06
FOXA1-202ENST00000545425 ARIH2OSQ8N7S6 290 aa21.69■■□□□ 1.06
FOXA1-202ENST00000545425 TRMT61BQ9BVS5 477 aaKnown RBP21.69■■□□□ 1.06
FOXA1-202ENST00000545425 POLE3Q9NRF9 147 aa21.69■■□□□ 1.06
FOXA1-202ENST00000545425 WDR45Q9Y484 360 aa21.69■■□□□ 1.06
FOXA1-202ENST00000545425 C2orf16Q68DN1 1984 aa21.68■■□□□ 1.06
FOXA1-202ENST00000545425 OR52A4PA6NMU1 304 aa21.68■■□□□ 1.06
FOXA1-202ENST00000545425 TNFSF14O43557 240 aa21.68■■□□□ 1.06
FOXA1-202ENST00000545425 IDH3BO43837 385 aa21.68■■□□□ 1.06
FOXA1-202ENST00000545425 DBIP07108 87 aaKnown RBP21.68■■□□□ 1.06
FOXA1-202ENST00000545425 CSF3P09919 207 aa21.68■■□□□ 1.06
FOXA1-202ENST00000545425 SMIM10L1P0DMW3 83 aa21.68■■□□□ 1.06
FOXA1-202ENST00000545425 GNSP15586 552 aa21.68■■□□□ 1.06
FOXA1-202ENST00000545425 RAB8AP61006 207 aa21.68■■□□□ 1.06
FOXA1-202ENST00000545425 FABP5Q01469 135 aa21.68■■□□□ 1.06
FOXA1-202ENST00000545425 MXD1Q05195 221 aa21.68■■□□□ 1.06
FOXA1-202ENST00000545425 ITPRIPL2Q3MIP1 535 aa21.68■■□□□ 1.06
FOXA1-202ENST00000545425 TYW3Q6IPR3 259 aaKnown RBP21.68■■□□□ 1.06
FOXA1-202ENST00000545425 DNAJA4Q8WW22 397 aaPredicted RBP21.68■■□□□ 1.06
FOXA1-202ENST00000545425 TM4SF19Q96DZ7 209 aa21.68■■□□□ 1.06
FOXA1-202ENST00000545425 SMIM10Q96HG1 83 aa21.68■■□□□ 1.06
FOXA1-202ENST00000545425 LYRM4Q9HD34 91 aa21.68■■□□□ 1.06
FOXA1-202ENST00000545425 SPHK1Q9NYA1 384 aa21.68■■□□□ 1.06
FOXA1-202ENST00000545425 CNIH4Q9P003 139 aa21.68■■□□□ 1.06
FOXA1-202ENST00000545425 SERGEFQ9UGK8 458 aa21.68■■□□□ 1.06
FOXA1-202ENST00000545425 CHST2Q9Y4C5 530 aa21.68■■□□□ 1.06
FOXA1-202ENST00000545425 A0A087WV62 115 aa21.67■■□□□ 1.06
FOXA1-202ENST00000545425 MEIOCA2RUB1 952 aa21.67■■□□□ 1.06
FOXA1-202ENST00000545425 TRAPPC13A5PLN9 417 aa21.67■■□□□ 1.06
FOXA1-202ENST00000545425 CASKO14936 926 aa21.67■■□□□ 1.06
FOXA1-202ENST00000545425 C8orf89P0DMQ9 161 aa21.67■■□□□ 1.06
FOXA1-202ENST00000545425 RPS4Y1P22090 263 aaKnown RBP21.67■■□□□ 1.06
FOXA1-202ENST00000545425 CPN2P22792 545 aa21.67■■□□□ 1.06
FOXA1-202ENST00000545425 OR4Q3Q8NH05 313 aa21.67■■□□□ 1.06
FOXA1-202ENST00000545425 ZFPM2Q8WW38 1151 aa21.67■■□□□ 1.06
FOXA1-202ENST00000545425 PIGUQ9H490 435 aa21.67■■□□□ 1.06
FOXA1-202ENST00000545425 C14orf105Q9NVL8 296 aa21.67■■□□□ 1.06
FOXA1-202ENST00000545425 GPR55Q9Y2T6 319 aaPredicted RBP21.67■■□□□ 1.06
FOXA1-202ENST00000545425 WASHC1A8K0Z3 465 aa21.66■■□□□ 1.06
FOXA1-202ENST00000545425 CENPXA8MT69 81 aa21.66■■□□□ 1.06
FOXA1-202ENST00000545425 HLA-DMAP28067 261 aa21.66■■□□□ 1.06
FOXA1-202ENST00000545425 TRHRP34981 398 aaPredicted RBP21.66■■□□□ 1.06
FOXA1-202ENST00000545425 MLLT3P42568 568 aaPredicted RBP21.66■■□□□ 1.06
FOXA1-202ENST00000545425 AVPR1BP47901 424 aa21.66■■□□□ 1.06
FOXA1-202ENST00000545425 PDX1P52945 283 aa21.66■■□□□ 1.06
FOXA1-202ENST00000545425 ZNF750Q32MQ0 723 aa21.66■■□□□ 1.06
FOXA1-202ENST00000545425 ZFP69Q49AA0 526 aa21.66■■□□□ 1.06
FOXA1-202ENST00000545425 PYDC2Q56P42 97 aa21.66■■□□□ 1.06
FOXA1-202ENST00000545425 EXOSC6Q5RKV6 272 aaKnown RBP21.66■■□□□ 1.06
FOXA1-202ENST00000545425 C6orf132Q5T0Z8 1188 aa21.66■■□□□ 1.06
FOXA1-202ENST00000545425 ATAD3CQ5T2N8 411 aa21.66■■□□□ 1.06
FOXA1-202ENST00000545425 SPATC1Q76KD6 591 aa21.66■■□□□ 1.06
FOXA1-202ENST00000545425 VN1R4Q7Z5H5 301 aa21.66■■□□□ 1.06
FOXA1-202ENST00000545425 OR52L1Q8NGH7 329 aa21.66■■□□□ 1.06
FOXA1-202ENST00000545425 RSC1A1Q92681 617 aa21.66■■□□□ 1.06
FOXA1-202ENST00000545425 KCTD12Q96CX2 325 aaKnown RBP21.66■■□□□ 1.06
FOXA1-202ENST00000545425 STACQ99469 402 aa21.66■■□□□ 1.06
FOXA1-202ENST00000545425 EQTNQ9NQ60 294 aa21.66■■□□□ 1.06
FOXA1-202ENST00000545425 TIGARQ9NQ88 270 aa21.66■■□□□ 1.06
FOXA1-202ENST00000545425 TNFRSF10DQ9UBN6 386 aa21.66■■□□□ 1.06
FOXA1-202ENST00000545425 PRSS38A1L453 326 aa21.66■■□□□ 1.06
FOXA1-202ENST00000545425 B3GALT2O43825 422 aa21.66■■□□□ 1.06
FOXA1-202ENST00000545425 GUSBP08236 651 aa21.66■■□□□ 1.06
FOXA1-202ENST00000545425 ALPPL2P10696 532 aa21.66■■□□□ 1.06
FOXA1-202ENST00000545425 EEF1A1P68104 462 aaKnown RBP21.66■■□□□ 1.06
FOXA1-202ENST00000545425 MANEAQ5SRI9 462 aa21.66■■□□□ 1.06
FOXA1-202ENST00000545425 NRMQ8IXM6 262 aa21.66■■□□□ 1.06
FOXA1-202ENST00000545425 CAMKVQ8NCB2 501 aa21.66■■□□□ 1.06
FOXA1-202ENST00000545425 TMEM203Q969S6 136 aa21.66■■□□□ 1.06
FOXA1-202ENST00000545425 TRAF4Q9BUZ4 470 aaPredicted RBP21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms