RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 PFKFB4Q16877 469 aa8.32□□□□□ -1.08
CHD4-212ENST00000545083 SH2D4BQ5SQS7 431 aa8.32□□□□□ -1.08
CHD4-212ENST00000545083 APOOLQ6UXV4 268 aa8.32□□□□□ -1.08
CHD4-212ENST00000545083 B3GLCTQ6Y288 498 aa8.32□□□□□ -1.08
CHD4-212ENST00000545083 PAGE2Q7Z2X7 111 aa8.32□□□□□ -1.08
CHD4-212ENST00000545083 CCDC25Q86WR0 208 aa8.32□□□□□ -1.08
CHD4-212ENST00000545083 CEP112Q8N8E3 955 aa8.32□□□□□ -1.08
CHD4-212ENST00000545083 BANPQ8N9N5 519 aa8.32□□□□□ -1.08
CHD4-212ENST00000545083 TRPC4APQ8TEL6 797 aa8.32□□□□□ -1.08
CHD4-212ENST00000545083 ABHD3Q8WU67 409 aa8.32□□□□□ -1.08
CHD4-212ENST00000545083 PROX1Q92786 737 aa8.32□□□□□ -1.08
CHD4-212ENST00000545083 NXNL1Q96CM4 212 aa8.32□□□□□ -1.08
CHD4-212ENST00000545083 PBKQ96KB5 322 aa8.32□□□□□ -1.08
CHD4-212ENST00000545083 KLHDC3Q9BQ90 382 aa8.32□□□□□ -1.08
CHD4-212ENST00000545083 TMEM185BQ9H7F4 350 aa8.32□□□□□ -1.08
CHD4-212ENST00000545083 NMRAL1Q9HBL8 299 aa8.32□□□□□ -1.08
CHD4-212ENST00000545083 SDHAF3Q9NRP4 125 aa8.32□□□□□ -1.08
CHD4-212ENST00000545083 CBLN4Q9NTU7 201 aa8.32□□□□□ -1.08
CHD4-212ENST00000545083 ACOT9Q9Y305 439 aa8.32□□□□□ -1.08
CHD4-212ENST00000545083 OR10H1Q9Y4A9 318 aa8.32□□□□□ -1.08
CHD4-212ENST00000545083 SNX8Q9Y5X2 465 aa8.32□□□□□ -1.08
CHD4-212ENST00000545083 IGLV3-32A0A0A0MS00 114 aa8.31□□□□□ -1.08
CHD4-212ENST00000545083 VWC2LB2RUY7 222 aa8.31□□□□□ -1.08
CHD4-212ENST00000545083 E7ESA3 106 aa8.31□□□□□ -1.08
CHD4-212ENST00000545083 OR7A17O14581 309 aa8.31□□□□□ -1.08
CHD4-212ENST00000545083 KIAA0513O60268 411 aa8.31□□□□□ -1.08
CHD4-212ENST00000545083 BCAS2O75934 225 aaPredicted RBP8.31□□□□□ -1.08
CHD4-212ENST00000545083 CLDN9O95484 217 aa8.31□□□□□ -1.08
CHD4-212ENST00000545083 HNF1AP20823 631 aa8.31□□□□□ -1.08
CHD4-212ENST00000545083 PTMSP20962 102 aa8.31□□□□□ -1.08
CHD4-212ENST00000545083 EDNRAP25101 427 aa8.31□□□□□ -1.08
CHD4-212ENST00000545083 PSMA4P25789 261 aaKnown RBP8.31□□□□□ -1.08
CHD4-212ENST00000545083 SHC1P29353 583 aa8.31□□□□□ -1.08
CHD4-212ENST00000545083 SSTR1P30872 391 aa8.31□□□□□ -1.08
CHD4-212ENST00000545083 ALDH9A1P49189 494 aa8.31□□□□□ -1.08
CHD4-212ENST00000545083 MRPS22P82650 360 aaKnown RBP8.31□□□□□ -1.08
CHD4-212ENST00000545083 ITGADQ13349 1161 aa8.31□□□□□ -1.08
CHD4-212ENST00000545083 GGTLC2Q14390 218 aa8.31□□□□□ -1.08
CHD4-212ENST00000545083 PPA1Q15181 289 aa8.31□□□□□ -1.08
CHD4-212ENST00000545083 STK11Q15831 433 aa8.31□□□□□ -1.08
CHD4-212ENST00000545083 CR1LQ2VPA4 569 aa8.31□□□□□ -1.08
CHD4-212ENST00000545083 SGO1Q5FBB7 561 aa8.31□□□□□ -1.08
CHD4-212ENST00000545083 FRG2Q64ET8 278 aa8.31□□□□□ -1.08
CHD4-212ENST00000545083 BHLHA15Q7RTS1 189 aaPredicted RBP8.31□□□□□ -1.08
CHD4-212ENST00000545083 EXOC3L1Q86VI1 746 aa8.31□□□□□ -1.08
CHD4-212ENST00000545083 WDR75Q8IWA0 830 aaKnown RBP8.31□□□□□ -1.08
CHD4-212ENST00000545083 TUSC5Q8IXB3 177 aa8.31□□□□□ -1.08
CHD4-212ENST00000545083 DEPDC4Q8N2C3 294 aa8.31□□□□□ -1.08
CHD4-212ENST00000545083 RFLNBQ8N5W9 214 aa8.31□□□□□ -1.08
CHD4-212ENST00000545083 OR7G2Q8NG99 324 aa8.31□□□□□ -1.08
CHD4-212ENST00000545083 RNF128Q8TEB7 428 aa8.31□□□□□ -1.08
CHD4-212ENST00000545083 KCTD4Q8WVF5 259 aa8.31□□□□□ -1.08
CHD4-212ENST00000545083 FRG2BQ96QU4 278 aa8.31□□□□□ -1.08
CHD4-212ENST00000545083 CPNE1Q99829 537 aa8.31□□□□□ -1.08
CHD4-212ENST00000545083 SOX7Q9BT81 388 aa8.31□□□□□ -1.08
CHD4-212ENST00000545083 C12orf65Q9H3J6 166 aaKnown RBP8.31□□□□□ -1.08
CHD4-212ENST00000545083 NOL11Q9H8H0 719 aaKnown RBP8.31□□□□□ -1.08
CHD4-212ENST00000545083 PFDN4Q9NQP4 134 aa8.31□□□□□ -1.08
CHD4-212ENST00000545083 FARSBQ9NSD9 589 aaKnown RBP8.31□□□□□ -1.08
CHD4-212ENST00000545083 FAM120CQ9NX05 1096 aaKnown RBP8.31□□□□□ -1.08
CHD4-212ENST00000545083 PAQR5Q9NXK6 330 aaPredicted RBP8.31□□□□□ -1.08
CHD4-212ENST00000545083 UTS2RQ9UKP6 389 aa8.31□□□□□ -1.08
CHD4-212ENST00000545083 PSME2Q9UL46 239 aa8.31□□□□□ -1.08
CHD4-212ENST00000545083 ABCG2Q9UNQ0 655 aa8.31□□□□□ -1.08
CHD4-212ENST00000545083 ZNF780BQ9Y6R6 833 aa8.31□□□□□ -1.08
CHD4-212ENST00000545083 IGHV4-61A0A0C4DH41 118 aa8.3□□□□□ -1.08
CHD4-212ENST00000545083 GOLGA8QA0A0J9YX86 632 aa8.3□□□□□ -1.08
CHD4-212ENST00000545083 GOLGA8OA6NCC3 632 aa8.3□□□□□ -1.08
CHD4-212ENST00000545083 GOLGA8NF8WBI6 632 aa8.3□□□□□ -1.08
CHD4-212ENST00000545083 H7C417 338 aa8.3□□□□□ -1.08
CHD4-212ENST00000545083 GOLGA8RI6L899 631 aa8.3□□□□□ -1.08
CHD4-212ENST00000545083 GUCY1B2O75343 617 aa8.3□□□□□ -1.08
CHD4-212ENST00000545083 LYZL6O75951 148 aa8.3□□□□□ -1.08
CHD4-212ENST00000545083 VENTXO95231 258 aa8.3□□□□□ -1.08
CHD4-212ENST00000545083 ANGPTL1O95841 491 aa8.3□□□□□ -1.08
CHD4-212ENST00000545083 LTA4HP09960 611 aaKnown RBP8.3□□□□□ -1.08
CHD4-212ENST00000545083 GFAPP14136 432 aa8.3□□□□□ -1.08
CHD4-212ENST00000545083 ZNF17P17021 662 aa8.3□□□□□ -1.08
CHD4-212ENST00000545083 GP5P40197 560 aa8.3□□□□□ -1.08
CHD4-212ENST00000545083 ALDH18A1P54886 795 aaKnown RBP8.3□□□□□ -1.08
CHD4-212ENST00000545083 RAC1P63000 192 aa8.3□□□□□ -1.08
CHD4-212ENST00000545083 PSPHP78330 225 aa8.3□□□□□ -1.08
CHD4-212ENST00000545083 ZNF155Q12901 538 aaPredicted RBP8.3□□□□□ -1.08
CHD4-212ENST00000545083 ILF2Q12905 390 aaKnown RBP8.3□□□□□ -1.08
CHD4-212ENST00000545083 CSTF3Q12996 717 aaKnown RBP8.3□□□□□ -1.08
CHD4-212ENST00000545083 TRAF3Q13114 568 aa8.3□□□□□ -1.08
CHD4-212ENST00000545083 ZNF239Q16600 458 aaKnown RBP8.3□□□□□ -1.08
CHD4-212ENST00000545083 ERCC6LQ2NKX8 1250 aa8.3□□□□□ -1.08
CHD4-212ENST00000545083 TMEM201Q5SNT2 666 aa8.3□□□□□ -1.08
CHD4-212ENST00000545083 HBMQ6B0K9 141 aa8.3□□□□□ -1.08
CHD4-212ENST00000545083 Q6ZSR9 355 aa8.3□□□□□ -1.08
CHD4-212ENST00000545083 RAPH1Q70E73 1250 aa8.3□□□□□ -1.08
CHD4-212ENST00000545083 TBC1D1Q86TI0 1168 aaPredicted RBP8.3□□□□□ -1.08
CHD4-212ENST00000545083 ZBED8Q8IZ13 594 aa8.3□□□□□ -1.08
CHD4-212ENST00000545083 CENPLQ8N0S6 344 aaPredicted RBP8.3□□□□□ -1.08
CHD4-212ENST00000545083 MUC15Q8N387 334 aa8.3□□□□□ -1.08
CHD4-212ENST00000545083 GTPBP8Q8N3Z3 284 aaPredicted RBP8.3□□□□□ -1.08
CHD4-212ENST00000545083 POC1BQ8TC44 478 aa8.3□□□□□ -1.08
CHD4-212ENST00000545083 ACTRT1Q8TDG2 376 aa8.3□□□□□ -1.08
CHD4-212ENST00000545083 SLC9A6Q92581 669 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms