RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 TMEM150CB9EJG8 249 aa5.44□□□□□ -1.54
VPS50-220ENST00000544910 PRSS23O95084 383 aa5.44□□□□□ -1.54
VPS50-220ENST00000544910 WNT3P56703 355 aa5.44□□□□□ -1.54
VPS50-220ENST00000544910 ACTA2P62736 377 aa5.44□□□□□ -1.54
VPS50-220ENST00000544910 ACTG2P63267 376 aa5.44□□□□□ -1.54
VPS50-220ENST00000544910 SIM1P81133 766 aaPredicted RBP5.44□□□□□ -1.54
VPS50-220ENST00000544910 PRDX1Q06830 199 aaKnown RBP5.44□□□□□ -1.54
VPS50-220ENST00000544910 PON3Q15166 354 aa5.44□□□□□ -1.54
VPS50-220ENST00000544910 MINDY4Q4G0A6 757 aa5.44□□□□□ -1.54
VPS50-220ENST00000544910 PYCR3Q53H96 274 aa5.44□□□□□ -1.54
VPS50-220ENST00000544910 DCST2Q5T1A1 773 aa5.44□□□□□ -1.54
VPS50-220ENST00000544910 PLBD1Q6P4A8 553 aa5.44□□□□□ -1.54
VPS50-220ENST00000544910 PDZD9Q8IXQ8 264 aa5.44□□□□□ -1.54
VPS50-220ENST00000544910 GPR135Q8IZ08 494 aa5.44□□□□□ -1.54
VPS50-220ENST00000544910 ZNF740Q8NDX6 193 aa5.44□□□□□ -1.54
VPS50-220ENST00000544910 SPPL3Q8TCT6 385 aa5.44□□□□□ -1.54
VPS50-220ENST00000544910 SGCDQ92629 289 aa5.44□□□□□ -1.54
VPS50-220ENST00000544910 LINC00615Q96LM1 132 aaPredicted RBP5.44□□□□□ -1.54
VPS50-220ENST00000544910 AMDHD1Q96NU7 426 aa5.44□□□□□ -1.54
VPS50-220ENST00000544910 CENPOQ9BU64 300 aa5.44□□□□□ -1.54
VPS50-220ENST00000544910 ZNF350Q9GZX5 532 aa5.44□□□□□ -1.54
VPS50-220ENST00000544910 RSPH9Q9H1X1 276 aaPredicted RBP5.44□□□□□ -1.54
VPS50-220ENST00000544910 EGLN3Q9H6Z9 239 aa5.44□□□□□ -1.54
VPS50-220ENST00000544910 FBXO8Q9NRD0 319 aa5.44□□□□□ -1.54
VPS50-220ENST00000544910 PRTFDC1Q9NRG1 225 aa5.44□□□□□ -1.54
VPS50-220ENST00000544910 RLIMQ9NVW2 624 aa5.44□□□□□ -1.54
VPS50-220ENST00000544910 ZNF226Q9NYT6 803 aa5.44□□□□□ -1.54
VPS50-220ENST00000544910 NPAP1Q9NZP6 1156 aa5.44□□□□□ -1.54
VPS50-220ENST00000544910 TBX21Q9UL17 535 aa5.44□□□□□ -1.54
VPS50-220ENST00000544910 CCL27Q9Y4X3 112 aa5.44□□□□□ -1.54
VPS50-220ENST00000544910 CDH10Q9Y6N8 788 aa5.44□□□□□ -1.54
VPS50-220ENST00000544910 OR5K4A6NMS3 321 aa5.44□□□□□ -1.54
VPS50-220ENST00000544910 FAM227AF5H4B4 570 aa5.44□□□□□ -1.54
VPS50-220ENST00000544910 TMX2-CTNND1H3BSU7 103 aa5.44□□□□□ -1.54
VPS50-220ENST00000544910 M0R036 132 aa5.44□□□□□ -1.54
VPS50-220ENST00000544910 PROM1O43490 865 aa5.44□□□□□ -1.54
VPS50-220ENST00000544910 DPM1O60762 260 aa5.44□□□□□ -1.54
VPS50-220ENST00000544910 TRIM3O75382 744 aaPredicted RBP5.44□□□□□ -1.54
VPS50-220ENST00000544910 SOX30O94993 753 aa5.44□□□□□ -1.54
VPS50-220ENST00000544910 CAPNS1P04632 268 aa5.44□□□□□ -1.54
VPS50-220ENST00000544910 IGFBP4P22692 258 aa5.44□□□□□ -1.54
VPS50-220ENST00000544910 TCEA1P23193 301 aaKnown RBP5.44□□□□□ -1.54
VPS50-220ENST00000544910 DNASE1P24855 282 aa5.44□□□□□ -1.54
VPS50-220ENST00000544910 BCL6P41182 706 aa5.44□□□□□ -1.54
VPS50-220ENST00000544910 SLC19A1P41440 591 aa5.44□□□□□ -1.54
VPS50-220ENST00000544910 GPR143P51810 404 aa5.44□□□□□ -1.54
VPS50-220ENST00000544910 SHC2P98077 582 aa5.44□□□□□ -1.54
VPS50-220ENST00000544910 KIR2DS3Q14952 304 aa5.44□□□□□ -1.54
VPS50-220ENST00000544910 SLX4IPQ5VYV7 408 aa5.44□□□□□ -1.54
VPS50-220ENST00000544910 ZCCHC12Q6PEW1 402 aa5.44□□□□□ -1.54
VPS50-220ENST00000544910 FBXO46Q6PJ61 603 aaPredicted RBP5.44□□□□□ -1.54
VPS50-220ENST00000544910 NOXA1Q86UR1 476 aa5.44□□□□□ -1.54
VPS50-220ENST00000544910 MEX3DQ86XN8 651 aaKnown RBP5.44□□□□□ -1.54
VPS50-220ENST00000544910 PIAS4Q8N2W9 510 aaPredicted RBP5.44□□□□□ -1.54
VPS50-220ENST00000544910 YIPF7Q8N8F6 280 aa5.44□□□□□ -1.54
VPS50-220ENST00000544910 SIMC1Q8NDZ2 872 aa5.44□□□□□ -1.54
VPS50-220ENST00000544910 GOT1L1Q8NHS2 421 aaPredicted RBP5.44□□□□□ -1.54
VPS50-220ENST00000544910 SPRYD4Q8WW59 207 aaPredicted RBP5.44□□□□□ -1.54
VPS50-220ENST00000544910 TCEAL3Q969E4 200 aa5.44□□□□□ -1.54
VPS50-220ENST00000544910 UBE2FQ969M7 185 aa5.44□□□□□ -1.54
VPS50-220ENST00000544910 ADAD1Q96M93 576 aaKnown RBP5.44□□□□□ -1.54
VPS50-220ENST00000544910 ZFYVE21Q9BQ24 234 aa5.44□□□□□ -1.54
VPS50-220ENST00000544910 DPH1Q9BZG8 443 aa5.44□□□□□ -1.54
VPS50-220ENST00000544910 TMEM168Q9H0V1 697 aa5.44□□□□□ -1.54
VPS50-220ENST00000544910 TRPV4Q9HBA0 871 aa5.44□□□□□ -1.54
VPS50-220ENST00000544910 TM7SF3Q9NS93 570 aa5.44□□□□□ -1.54
VPS50-220ENST00000544910 ZFR2Q9UPR6 939 aaKnown RBP5.44□□□□□ -1.54
VPS50-220ENST00000544910 A0A1B0GVT2 93 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 TRIM64A6NGJ6 449 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 TRIM64BA6NI03 449 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 A8MVJ9 347 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 HMGN4O00479 90 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 B4GALT2O60909 372 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 FUCA1P04066 466 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 PVALBP20472 110 aaPredicted RBP5.43□□□□□ -1.54
VPS50-220ENST00000544910 PTGER1P34995 402 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 GJA4P35212 333 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 TNFRSF4P43489 277 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 TNFRSF17Q02223 184 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 ZNF91Q05481 1191 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 AQP6Q13520 282 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 EIF2S3LQ2VIR3 472 aaKnown RBP5.43□□□□□ -1.54
VPS50-220ENST00000544910 ZNF791Q3KP31 576 aaPredicted RBP5.43□□□□□ -1.54
VPS50-220ENST00000544910 LRRN1Q6UXK5 716 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 CEACAM19Q7Z692 300 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 FAM109AQ8N4B1 249 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 VN1R2Q8NFZ6 395 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 TCTEX1D2Q8WW35 142 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 TANKQ92844 425 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 MYADMQ96S97 322 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 CNN2Q99439 309 aaKnown RBP5.43□□□□□ -1.54
VPS50-220ENST00000544910 POLDIP3Q9BY77 421 aaKnown RBP5.43□□□□□ -1.54
VPS50-220ENST00000544910 OR52A5Q9H2C5 316 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 NKX2-4Q9H2Z4 354 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 GLIPR2Q9H4G4 154 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 EVA1AQ9H8M9 152 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 AKIP1Q9NQ31 210 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 CLDND1Q9NY35 253 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 OBP2AQ9NY56 170 aa5.43□□□□□ -1.54
VPS50-220ENST00000544910 ACTR10Q9NZ32 417 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms