RNA–Protein interactions for RNA: ENST00000544907.6

TNFAIP1-202, Transcript of TNF alpha induced protein 1, humanhuman

TSL 2 BASIC

Gene TNFAIP1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-202ENST00000544907 OR8D4Q8NGM9 314 aa16.81■□□□□ 0.28
TNFAIP1-202ENST00000544907 BRIX1Q8TDN6 353 aaKnown RBP16.81■□□□□ 0.28
TNFAIP1-202ENST00000544907 SLC35B4Q969S0 331 aa16.81■□□□□ 0.28
TNFAIP1-202ENST00000544907 COQ7Q99807 217 aa16.81■□□□□ 0.28
TNFAIP1-202ENST00000544907 NEURL2Q9BR09 285 aa16.81■□□□□ 0.28
TNFAIP1-202ENST00000544907 ASPNQ9BXN1 380 aa16.81■□□□□ 0.28
TNFAIP1-202ENST00000544907 EGLN3Q9H6Z9 239 aa16.81■□□□□ 0.28
TNFAIP1-202ENST00000544907 ANKRA2Q9H9E1 313 aa16.81■□□□□ 0.28
TNFAIP1-202ENST00000544907 EVA1BQ9NVM1 165 aa16.81■□□□□ 0.28
TNFAIP1-202ENST00000544907 SNRNP200O75643 2136 aaKnown RBP16.8■□□□□ 0.28
TNFAIP1-202ENST00000544907 TRBV23OR9-2A0A075B6M9 112 aa16.8■□□□□ 0.28
TNFAIP1-202ENST00000544907 IQCMA0A1B0GVH7 501 aa16.8■□□□□ 0.28
TNFAIP1-202ENST00000544907 SLC35F4A4IF30 521 aa16.8■□□□□ 0.28
TNFAIP1-202ENST00000544907 OR5K3A6NET4 321 aa16.8■□□□□ 0.28
TNFAIP1-202ENST00000544907 SURF4O15260 269 aa16.8■□□□□ 0.28
TNFAIP1-202ENST00000544907 COQ9O75208 318 aa16.8■□□□□ 0.28
TNFAIP1-202ENST00000544907 PTTG1O95997 202 aa16.8■□□□□ 0.28
TNFAIP1-202ENST00000544907 CKMT1AP12532 417 aa16.8■□□□□ 0.28
TNFAIP1-202ENST00000544907 RORCP51449 518 aa16.8■□□□□ 0.28
TNFAIP1-202ENST00000544907 RAB38P57729 211 aa16.8■□□□□ 0.28
TNFAIP1-202ENST00000544907 SKP1P63208 163 aa16.8■□□□□ 0.28
TNFAIP1-202ENST00000544907 LSM11P83369 360 aaKnown RBP eCLIP16.8■□□□□ 0.28
TNFAIP1-202ENST00000544907 ACSM1Q08AH1 577 aa16.8■□□□□ 0.28
TNFAIP1-202ENST00000544907 SOWAHCQ53LP3 525 aaPredicted RBP16.8■□□□□ 0.28
TNFAIP1-202ENST00000544907 CA13Q8N1Q1 262 aa16.8■□□□□ 0.28
TNFAIP1-202ENST00000544907 SLC43A2Q8N370 569 aa16.8■□□□□ 0.28
TNFAIP1-202ENST00000544907 PARP16Q8N5Y8 322 aa16.8■□□□□ 0.28
TNFAIP1-202ENST00000544907 SNRNP27Q8WVK2 155 aaKnown RBP16.8■□□□□ 0.28
TNFAIP1-202ENST00000544907 RNFT2Q96EX2 444 aa16.8■□□□□ 0.28
TNFAIP1-202ENST00000544907 FAM46AQ96IP4 442 aaKnown RBP16.8■□□□□ 0.28
TNFAIP1-202ENST00000544907 WDFY2Q96P53 400 aa16.8■□□□□ 0.28
TNFAIP1-202ENST00000544907 MED18Q9BUE0 208 aa16.8■□□□□ 0.28
TNFAIP1-202ENST00000544907 SEMA6CQ9H3T2 930 aa16.8■□□□□ 0.28
TNFAIP1-202ENST00000544907 FN3KQ9H479 309 aa16.8■□□□□ 0.28
TNFAIP1-202ENST00000544907 THY1P04216 161 aa16.79■□□□□ 0.28
TNFAIP1-202ENST00000544907 SLC35E2P0CK97 266 aa16.79■□□□□ 0.28
TNFAIP1-202ENST00000544907 LSSP48449 732 aa16.79■□□□□ 0.28
TNFAIP1-202ENST00000544907 SNRPNP63162 240 aaKnown RBP16.79■□□□□ 0.28
TNFAIP1-202ENST00000544907 MGAT2Q10469 447 aa16.79■□□□□ 0.28
TNFAIP1-202ENST00000544907 EIF2B5Q13144 721 aaKnown RBP16.79■□□□□ 0.28
TNFAIP1-202ENST00000544907 DOC2BQ14184 412 aa16.79■□□□□ 0.28
TNFAIP1-202ENST00000544907 PGGHGQ32M88 737 aa16.79■□□□□ 0.28
TNFAIP1-202ENST00000544907 PLK5Q496M5 336 aa16.79■□□□□ 0.28
TNFAIP1-202ENST00000544907 NXNL2Q5VZ03 156 aa16.79■□□□□ 0.28
TNFAIP1-202ENST00000544907 HMGN2P46Q86SG4 172 aa16.79■□□□□ 0.28
TNFAIP1-202ENST00000544907 NKAIN4Q8IVV8 208 aa16.79■□□□□ 0.28
TNFAIP1-202ENST00000544907 OR2T33Q8NG76 320 aa16.79■□□□□ 0.28
TNFAIP1-202ENST00000544907 ADAMTS18Q8TE60 1221 aa16.79■□□□□ 0.28
TNFAIP1-202ENST00000544907 SLC37A2Q8TED4 501 aa16.79■□□□□ 0.28
TNFAIP1-202ENST00000544907 RNF167Q9H6Y7 350 aa16.79■□□□□ 0.28
TNFAIP1-202ENST00000544907 CTPS2Q9NRF8 586 aa16.79■□□□□ 0.28
TNFAIP1-202ENST00000544907 MAT2BQ9NZL9 334 aa16.79■□□□□ 0.28
TNFAIP1-202ENST00000544907 WNT16Q9UBV4 365 aa16.79■□□□□ 0.28
TNFAIP1-202ENST00000544907 POMT2Q9UKY4 750 aa16.79■□□□□ 0.28
TNFAIP1-202ENST00000544907 CA14Q9ULX7 337 aa16.79■□□□□ 0.28
TNFAIP1-202ENST00000544907 TMEM5Q9Y2B1 443 aa16.79■□□□□ 0.28
TNFAIP1-202ENST00000544907 EXOGQ9Y2C4 368 aaKnown RBP16.79■□□□□ 0.28
TNFAIP1-202ENST00000544907 F5P12259 2224 aa16.78■□□□□ 0.28
TNFAIP1-202ENST00000544907 CDHR4A6H8M9 788 aa16.78■□□□□ 0.28
TNFAIP1-202ENST00000544907 FRS3O43559 492 aa16.78■□□□□ 0.28
TNFAIP1-202ENST00000544907 FGF17O60258 216 aa16.78■□□□□ 0.28
TNFAIP1-202ENST00000544907 NKX2-2O95096 273 aa16.78■□□□□ 0.28
TNFAIP1-202ENST00000544907 HTR1FP30939 366 aa16.78■□□□□ 0.28
TNFAIP1-202ENST00000544907 ETV5P41161 510 aa16.78■□□□□ 0.28
TNFAIP1-202ENST00000544907 SOX3P41225 446 aa16.78■□□□□ 0.28
TNFAIP1-202ENST00000544907 ETV1P50549 477 aa16.78■□□□□ 0.28
TNFAIP1-202ENST00000544907 RPS3AP61247 264 aaKnown RBP16.78■□□□□ 0.28
TNFAIP1-202ENST00000544907 MAP4K2Q12851 820 aa16.78■□□□□ 0.28
TNFAIP1-202ENST00000544907 DSG2Q14126 1118 aa16.78■□□□□ 0.28
TNFAIP1-202ENST00000544907 TRMT12Q53H54 448 aaKnown RBP16.78■□□□□ 0.28
TNFAIP1-202ENST00000544907 ARMC4Q5T2S8 1044 aa16.78■□□□□ 0.28
TNFAIP1-202ENST00000544907 DGLUCYQ7Z3D6 616 aa16.78■□□□□ 0.28
TNFAIP1-202ENST00000544907 LAPTM4BQ86VI4 370 aa16.78■□□□□ 0.28
TNFAIP1-202ENST00000544907 NRMQ8IXM6 262 aa16.78■□□□□ 0.28
TNFAIP1-202ENST00000544907 ARHGEF39Q8N4T4 335 aa16.78■□□□□ 0.28
TNFAIP1-202ENST00000544907 COX18Q8N8Q8 333 aa16.78■□□□□ 0.28
TNFAIP1-202ENST00000544907 CHRDQ9H2X0 955 aa16.78■□□□□ 0.28
TNFAIP1-202ENST00000544907 UCK1Q9HA47 277 aa16.78■□□□□ 0.28
TNFAIP1-202ENST00000544907 CNIH4Q9P003 139 aa16.78■□□□□ 0.28
TNFAIP1-202ENST00000544907 BRINP1O60477 761 aa16.78■□□□□ 0.28
TNFAIP1-202ENST00000544907 GALP22466 123 aa16.78■□□□□ 0.28
TNFAIP1-202ENST00000544907 ZXDAP98168 799 aa16.78■□□□□ 0.28
TNFAIP1-202ENST00000544907 FZD2Q14332 565 aa16.78■□□□□ 0.28
TNFAIP1-202ENST00000544907 ZNF613Q6PF04 617 aa16.78■□□□□ 0.28
TNFAIP1-202ENST00000544907 CD200R1LQ6Q8B3 271 aa16.78■□□□□ 0.28
TNFAIP1-202ENST00000544907 BCDIN3DQ7Z5W3 292 aaKnown RBP16.78■□□□□ 0.28
TNFAIP1-202ENST00000544907 GRAMD2AQ8IUY3 354 aa16.78■□□□□ 0.28
TNFAIP1-202ENST00000544907 GID4Q8IVV7 300 aa16.78■□□□□ 0.28
TNFAIP1-202ENST00000544907 OR4N5Q8IXE1 308 aa16.78■□□□□ 0.28
TNFAIP1-202ENST00000544907 ZNF485Q8NCK3 441 aa16.78■□□□□ 0.28
TNFAIP1-202ENST00000544907 HMGB4Q8WW32 186 aa16.78■□□□□ 0.28
TNFAIP1-202ENST00000544907 PRSS27Q9BQR3 290 aa16.78■□□□□ 0.28
TNFAIP1-202ENST00000544907 SLC30A2Q9BRI3 323 aa16.78■□□□□ 0.28
TNFAIP1-202ENST00000544907 ZNF223Q9UK11 482 aaPredicted RBP16.78■□□□□ 0.28
TNFAIP1-202ENST00000544907 MRPS2Q9Y399 296 aaKnown RBP16.78■□□□□ 0.28
TNFAIP1-202ENST00000544907 NCOR1O75376 2440 aa16.77■□□□□ 0.28
TNFAIP1-202ENST00000544907 SHISA7A6NL88 538 aa16.77■□□□□ 0.28
TNFAIP1-202ENST00000544907 SRPX2O60687 465 aaPredicted RBP16.77■□□□□ 0.28
TNFAIP1-202ENST00000544907 IGHA1P01876 353 aa16.77■□□□□ 0.28
TNFAIP1-202ENST00000544907 GNSP15586 552 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms