RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 PARVBQ9HBI1 364 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 LYRM4Q9HD34 91 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 MYOZ1Q9NP98 299 aaPredicted RBP3.64□□□□□ -1.83
SNHG1-220ENST00000544550 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.64□□□□□ -1.83
SNHG1-220ENST00000544550 CHRAC1Q9NRG0 131 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 PLSCR4Q9NRQ2 329 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 TREX1Q9NSU2 369 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 CBLN4Q9NTU7 201 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 TAS2R10Q9NYW0 307 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 CISD1Q9NZ45 108 aaKnown RBP3.64□□□□□ -1.83
SNHG1-220ENST00000544550 EXO1Q9UQ84 846 aaKnown RBP3.64□□□□□ -1.83
SNHG1-220ENST00000544550 B3GALT5Q9Y2C3 310 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 CRYL1Q9Y2S2 319 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 MRPS18CQ9Y3D5 142 aaKnown RBP3.64□□□□□ -1.83
SNHG1-220ENST00000544550 ZNF175Q9Y473 711 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 HYOU1Q9Y4L1 999 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 COMMD10Q9Y6G5 202 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 SCN2AQ99250 2005 aa3.64□□□□□ -1.83
SNHG1-220ENST00000544550 C2orf92A0A1B0GVN3 265 aa3.63□□□□□ -1.83
SNHG1-220ENST00000544550 A0A1W2PPL8 197 aa3.63□□□□□ -1.83
SNHG1-220ENST00000544550 LRIT2A6NDA9 550 aa3.63□□□□□ -1.83
SNHG1-220ENST00000544550 PRSS29PA6NIE9 313 aa3.63□□□□□ -1.83
SNHG1-220ENST00000544550 SMTNL1A8MU46 457 aa3.63□□□□□ -1.83
SNHG1-220ENST00000544550 H7C417 338 aa3.63□□□□□ -1.83
SNHG1-220ENST00000544550 LDB3O75112 727 aa3.63□□□□□ -1.83
SNHG1-220ENST00000544550 SLC43A1O75387 559 aa3.63□□□□□ -1.83
SNHG1-220ENST00000544550 VENTXO95231 258 aa3.63□□□□□ -1.83
SNHG1-220ENST00000544550 VAPBO95292 243 aa3.63□□□□□ -1.83
SNHG1-220ENST00000544550 PLGP00747 810 aaPredicted RBP3.63□□□□□ -1.83
SNHG1-220ENST00000544550 CD8AP01732 235 aa3.63□□□□□ -1.83
SNHG1-220ENST00000544550 PTMAP06454 111 aaKnown RBP3.63□□□□□ -1.83
SNHG1-220ENST00000544550 NAGAP17050 411 aa3.63□□□□□ -1.83
SNHG1-220ENST00000544550 IL11P20809 199 aa3.63□□□□□ -1.83
SNHG1-220ENST00000544550 STIP1P31948 543 aaKnown RBP3.63□□□□□ -1.83
SNHG1-220ENST00000544550 HTR3AP46098 478 aa3.63□□□□□ -1.83
SNHG1-220ENST00000544550 PDLIM4P50479 330 aa3.63□□□□□ -1.83
SNHG1-220ENST00000544550 EFNA4P52798 201 aa3.63□□□□□ -1.83
SNHG1-220ENST00000544550 PLA2G16P53816 162 aa3.63□□□□□ -1.83
SNHG1-220ENST00000544550 CDH11P55287 796 aa3.63□□□□□ -1.83
SNHG1-220ENST00000544550 HNRNPH2P55795 449 aaKnown RBP3.63□□□□□ -1.83
SNHG1-220ENST00000544550 CTBP2P56545 445 aa3.63□□□□□ -1.83
SNHG1-220ENST00000544550 CLRN1P58418 232 aa3.63□□□□□ -1.83
SNHG1-220ENST00000544550 RPS3AP61247 264 aaKnown RBP3.63□□□□□ -1.83
SNHG1-220ENST00000544550 HERVK_113P63132 956 aa3.63□□□□□ -1.83
SNHG1-220ENST00000544550 ERVK-8P63133 956 aa3.63□□□□□ -1.83
SNHG1-220ENST00000544550 IRX1P78414 480 aaPredicted RBP3.63□□□□□ -1.83
SNHG1-220ENST00000544550 FOXL1Q12952 345 aa3.63□□□□□ -1.83
SNHG1-220ENST00000544550 CUL1Q13616 776 aa3.63□□□□□ -1.83
SNHG1-220ENST00000544550 GGTLC2Q14390 218 aa3.63□□□□□ -1.83
SNHG1-220ENST00000544550 GUSBP1Q15486 140 aa3.63□□□□□ -1.83
SNHG1-220ENST00000544550 CYP1B1Q16678 543 aa3.63□□□□□ -1.83
SNHG1-220ENST00000544550 AWAT1Q58HT5 328 aa3.63□□□□□ -1.83
SNHG1-220ENST00000544550 ARMC3Q5W041 872 aa3.63□□□□□ -1.83
SNHG1-220ENST00000544550 CYHR1Q6ZMK1 362 aa3.63□□□□□ -1.83
SNHG1-220ENST00000544550 NUP54Q7Z3B4 507 aa3.63□□□□□ -1.83
SNHG1-220ENST00000544550 TMPRSS11BQ86T26 416 aa3.63□□□□□ -1.83
SNHG1-220ENST00000544550 ST13P4Q8IZP2 240 aaPredicted RBP3.63□□□□□ -1.83
SNHG1-220ENST00000544550 C17orf47Q8NEP4 570 aa3.63□□□□□ -1.83
SNHG1-220ENST00000544550 KBTBD8Q8NFY9 601 aa3.63□□□□□ -1.83
SNHG1-220ENST00000544550 OR56A3Q8NH54 315 aa3.63□□□□□ -1.83
SNHG1-220ENST00000544550 KCTD4Q8WVF5 259 aa3.63□□□□□ -1.83
SNHG1-220ENST00000544550 CCT6BQ92526 530 aa3.63□□□□□ -1.83
SNHG1-220ENST00000544550 NEIL2Q969S2 332 aa3.63□□□□□ -1.83
SNHG1-220ENST00000544550 MRPL24Q96A35 216 aaKnown RBP3.63□□□□□ -1.83
SNHG1-220ENST00000544550 MS4A6EQ96DS6 147 aa3.63□□□□□ -1.83
SNHG1-220ENST00000544550 GMPPAQ96IJ6 420 aaPredicted RBP3.63□□□□□ -1.83
SNHG1-220ENST00000544550 CSF3RQ99062 836 aa3.63□□□□□ -1.83
SNHG1-220ENST00000544550 NDNQ99608 321 aa3.63□□□□□ -1.83
SNHG1-220ENST00000544550 ELAC2Q9BQ52 826 aaKnown RBP3.63□□□□□ -1.83
SNHG1-220ENST00000544550 C1orf43Q9BWL3 253 aa3.63□□□□□ -1.83
SNHG1-220ENST00000544550 ERVK-6Q9BXR3 956 aa3.63□□□□□ -1.83
SNHG1-220ENST00000544550 OSBPL8Q9BZF1 889 aa3.63□□□□□ -1.83
SNHG1-220ENST00000544550 IL22Q9GZX6 179 aa3.63□□□□□ -1.83
SNHG1-220ENST00000544550 HSD3B7Q9H2F3 369 aa3.63□□□□□ -1.83
SNHG1-220ENST00000544550 KLHL31Q9H511 634 aa3.63□□□□□ -1.83
SNHG1-220ENST00000544550 GLRX2Q9NS18 164 aa3.63□□□□□ -1.83
SNHG1-220ENST00000544550 MS4A12Q9NXJ0 267 aa3.63□□□□□ -1.83
SNHG1-220ENST00000544550 ARL15Q9NXU5 204 aa3.63□□□□□ -1.83
SNHG1-220ENST00000544550 KLRF1Q9NZS2 232 aa3.63□□□□□ -1.83
SNHG1-220ENST00000544550 BFARQ9NZS9 450 aa3.63□□□□□ -1.83
SNHG1-220ENST00000544550 PPP4R1LQ9P1A2 415 aa3.63□□□□□ -1.83
SNHG1-220ENST00000544550 GALPQ9UBC7 116 aa3.63□□□□□ -1.83
SNHG1-220ENST00000544550 DKKL1Q9UK85 242 aa3.63□□□□□ -1.83
SNHG1-220ENST00000544550 ZDHHC8Q9ULC8 765 aa3.63□□□□□ -1.83
SNHG1-220ENST00000544550 CAPN11Q9UMQ6 739 aa3.63□□□□□ -1.83
SNHG1-220ENST00000544550 ERVK-19Q9WJR5 959 aa3.63□□□□□ -1.83
SNHG1-220ENST00000544550 PDE10AQ9Y233 779 aa3.63□□□□□ -1.83
SNHG1-220ENST00000544550 WBP11Q9Y2W2 641 aaKnown RBP3.63□□□□□ -1.83
SNHG1-220ENST00000544550 DHRS7Q9Y394 339 aa3.63□□□□□ -1.83
SNHG1-220ENST00000544550 PCDHGB1Q9Y5G3 927 aa3.63□□□□□ -1.83
SNHG1-220ENST00000544550 FKBP7Q9Y680 259 aa3.63□□□□□ -1.83
SNHG1-220ENST00000544550 KCNE2Q9Y6J6 123 aa3.63□□□□□ -1.83
SNHG1-220ENST00000544550 A0A0G2JN53 185 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 TCRBV7S2A1N4TA0A589 114 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 CTAGE9A4FU28 777 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 ANKDD1BA6NHY2 528 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 C4orf51C9J302 202 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 AKR1B15C9JRZ8 316 aaPredicted RBP3.62□□□□□ -1.83
SNHG1-220ENST00000544550 GOLGA8TH3BQL2 631 aa3.62□□□□□ -1.83
SNHG1-220ENST00000544550 FGF17O60258 216 aa3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms