RNA–Protein interactions for RNA: ENST00000543727.5

TSFM-208, Transcript of Ts translation elongation factor, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene TSFM, Length 651 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSFM-208ENST00000543727 STX11O75558 287 aa16.3■□□□□ 0.2
TSFM-208ENST00000543727 AGFG2O95081 481 aa16.3■□□□□ 0.2
TSFM-208ENST00000543727 MSX1P28360 303 aa16.3■□□□□ 0.2
TSFM-208ENST00000543727 SRD5A2P31213 254 aa16.3■□□□□ 0.2
TSFM-208ENST00000543727 ARFIP2P53365 341 aa16.3■□□□□ 0.2
TSFM-208ENST00000543727 HSF1Q00613 529 aa16.3■□□□□ 0.2
TSFM-208ENST00000543727 C6orf10Q5SRN2 563 aa16.3■□□□□ 0.2
TSFM-208ENST00000543727 C16orf62Q7Z3J2 963 aa16.3■□□□□ 0.2
TSFM-208ENST00000543727 FUNDC1Q8IVP5 155 aa16.3■□□□□ 0.2
TSFM-208ENST00000543727 OR4K17Q8NGC6 315 aa16.3■□□□□ 0.2
TSFM-208ENST00000543727 OR5D16Q8NGK9 328 aa16.3■□□□□ 0.2
TSFM-208ENST00000543727 GTF2H4Q92759 462 aa16.3■□□□□ 0.2
TSFM-208ENST00000543727 VPS33AQ96AX1 596 aa16.3■□□□□ 0.2
TSFM-208ENST00000543727 THOC1Q96FV9 657 aaKnown RBP16.3■□□□□ 0.2
TSFM-208ENST00000543727 SDF2Q99470 211 aa16.3■□□□□ 0.2
TSFM-208ENST00000543727 ZNF350Q9GZX5 532 aa16.3■□□□□ 0.2
TSFM-208ENST00000543727 RAD21L1Q9H4I0 556 aa16.3■□□□□ 0.2
TSFM-208ENST00000543727 SERHL2Q9H4I8 314 aa16.3■□□□□ 0.2
TSFM-208ENST00000543727 SUCOQ9UBS9 1254 aaKnown RBP16.3■□□□□ 0.2
TSFM-208ENST00000543727 GMEB1Q9Y692 573 aa16.3■□□□□ 0.2
TSFM-208ENST00000543727 ARHGAP21Q5T5U3 1957 aa16.29■□□□□ 0.2
TSFM-208ENST00000543727 A0A096LPI6 279 aa16.29■□□□□ 0.2
TSFM-208ENST00000543727 TRGV8A0A0C4DH27 118 aa16.29■□□□□ 0.2
TSFM-208ENST00000543727 A0A1W2PP18 115 aa16.29■□□□□ 0.2
TSFM-208ENST00000543727 FIGNL2A6NMB9 653 aa16.29■□□□□ 0.2
TSFM-208ENST00000543727 H3BNH8 94 aa16.29■□□□□ 0.2
TSFM-208ENST00000543727 ADAM10O14672 748 aa16.29■□□□□ 0.2
TSFM-208ENST00000543727 NDUFB5O43674 189 aa16.29■□□□□ 0.2
TSFM-208ENST00000543727 SCO2O43819 266 aa16.29■□□□□ 0.2
TSFM-208ENST00000543727 TRAPPC6AO75865 159 aa16.29■□□□□ 0.2
TSFM-208ENST00000543727 WISP2O76076 250 aa16.29■□□□□ 0.2
TSFM-208ENST00000543727 PDE9AO76083 593 aa16.29■□□□□ 0.2
TSFM-208ENST00000543727 HOXD4P09016 255 aaPredicted RBP16.29■□□□□ 0.2
TSFM-208ENST00000543727 PPIBP23284 216 aaKnown RBP16.29■□□□□ 0.2
TSFM-208ENST00000543727 ADSLP30566 484 aaPredicted RBP16.29■□□□□ 0.2
TSFM-208ENST00000543727 CDKN2CP42773 168 aa16.29■□□□□ 0.2
TSFM-208ENST00000543727 DSCR4P56555 118 aaPredicted RBP16.29■□□□□ 0.2
TSFM-208ENST00000543727 RPS26P62854 115 aaKnown RBP16.29■□□□□ 0.2
TSFM-208ENST00000543727 FLYWCH1Q4VC44 716 aa16.29■□□□□ 0.2
TSFM-208ENST00000543727 AGKQ53H12 422 aa16.29■□□□□ 0.2
TSFM-208ENST00000543727 LRIF1Q5T3J3 769 aa16.29■□□□□ 0.2
TSFM-208ENST00000543727 FGD2Q7Z6J4 655 aa16.29■□□□□ 0.2
TSFM-208ENST00000543727 OR4C3Q8NH37 302 aa16.29■□□□□ 0.2
TSFM-208ENST00000543727 ZFP90Q8TF47 636 aa16.29■□□□□ 0.2
TSFM-208ENST00000543727 SSC4DQ8WTU2 575 aa16.29■□□□□ 0.2
TSFM-208ENST00000543727 PHF10Q8WUB8 498 aaKnown RBP16.29■□□□□ 0.2
TSFM-208ENST00000543727 PMM1Q92871 262 aa16.29■□□□□ 0.2
TSFM-208ENST00000543727 OTUB1Q96FW1 271 aaPredicted RBP16.29■□□□□ 0.2
TSFM-208ENST00000543727 TP63Q9H3D4 680 aaPredicted RBP16.29■□□□□ 0.2
TSFM-208ENST00000543727 EXO5Q9H790 373 aa16.29■□□□□ 0.2
TSFM-208ENST00000543727 LIPGQ9Y5X9 500 aa16.29■□□□□ 0.2
TSFM-208ENST00000543727 WIPF3A6NGB9 483 aa16.28■□□□□ 0.2
TSFM-208ENST00000543727 E9PLN8 166 aa16.28■□□□□ 0.2
TSFM-208ENST00000543727 NPIPB9F8W1W9 429 aa16.28■□□□□ 0.2
TSFM-208ENST00000543727 NR5A2O00482 541 aa16.28■□□□□ 0.2
TSFM-208ENST00000543727 LRRTM2O43300 516 aa16.28■□□□□ 0.2
TSFM-208ENST00000543727 WDR1O75083 606 aa16.28■□□□□ 0.2
TSFM-208ENST00000543727 ANGPTL1O95841 491 aa16.28■□□□□ 0.2
TSFM-208ENST00000543727 ACTL6AO96019 429 aa16.28■□□□□ 0.2
TSFM-208ENST00000543727 CELA3AP09093 270 aa16.28■□□□□ 0.2
TSFM-208ENST00000543727 PTGER4P35408 488 aa16.28■□□□□ 0.2
TSFM-208ENST00000543727 DCTP40126 519 aa16.28■□□□□ 0.2
TSFM-208ENST00000543727 ATP12AP54707 1039 aa16.28■□□□□ 0.2
TSFM-208ENST00000543727 HPCAP84074 193 aa16.28■□□□□ 0.2
TSFM-208ENST00000543727 FADDQ13158 208 aa16.28■□□□□ 0.2
TSFM-208ENST00000543727 TOMM20Q15388 145 aa16.28■□□□□ 0.2
TSFM-208ENST00000543727 SF3B4Q15427 424 aaKnown RBP eCLIP16.28■□□□□ 0.2
TSFM-208ENST00000543727 GLYR1Q49A26 553 aaPredicted RBP16.28■□□□□ 0.2
TSFM-208ENST00000543727 CCNJQ5T5M9 372 aa16.28■□□□□ 0.2
TSFM-208ENST00000543727 WLSQ5T9L3 541 aa16.28■□□□□ 0.2
TSFM-208ENST00000543727 CGB2Q6NT52 195 aa16.28■□□□□ 0.2
TSFM-208ENST00000543727 TNFAIP8L2Q6P589 184 aaPredicted RBP16.28■□□□□ 0.2
TSFM-208ENST00000543727 RNF130Q86XS8 419 aa16.28■□□□□ 0.2
TSFM-208ENST00000543727 PM20D2Q8IYS1 436 aa16.28■□□□□ 0.2
TSFM-208ENST00000543727 CLEC4FQ8N1N0 589 aa16.28■□□□□ 0.2
TSFM-208ENST00000543727 FAM83FQ8NEG4 500 aaPredicted RBP16.28■□□□□ 0.2
TSFM-208ENST00000543727 VKORC1Q9BQB6 163 aa16.28■□□□□ 0.2
TSFM-208ENST00000543727 TPT1P8Q9HAU6 139 aa16.28■□□□□ 0.2
TSFM-208ENST00000543727 SLC52A3Q9NQ40 469 aa16.28■□□□□ 0.2
TSFM-208ENST00000543727 FLRT3Q9NZU0 649 aa16.28■□□□□ 0.2
TSFM-208ENST00000543727 ERRFI1Q9UJM3 462 aaPredicted RBP16.28■□□□□ 0.2
TSFM-208ENST00000543727 CORO2BQ9UQ03 480 aa16.28■□□□□ 0.2
TSFM-208ENST00000543727 NCOA6Q14686 2063 aaPredicted RBP16.28■□□□□ 0.2
TSFM-208ENST00000543727 C2orf72A6NCS6 295 aa16.27■□□□□ 0.2
TSFM-208ENST00000543727 LINC01387J3KSC0 135 aa16.27■□□□□ 0.2
TSFM-208ENST00000543727 HMGN4O00479 90 aa16.27■□□□□ 0.2
TSFM-208ENST00000543727 SLC22A2O15244 555 aa16.27■□□□□ 0.2
TSFM-208ENST00000543727 KIAA0513O60268 411 aa16.27■□□□□ 0.2
TSFM-208ENST00000543727 SEMA7AO75326 666 aa16.27■□□□□ 0.2
TSFM-208ENST00000543727 GSNP06396 782 aa16.27■□□□□ 0.2
TSFM-208ENST00000543727 TPOP07202 933 aa16.27■□□□□ 0.2
TSFM-208ENST00000543727 OR12D1P0DN82 309 aa16.27■□□□□ 0.2
TSFM-208ENST00000543727 GABRA1P14867 456 aa16.27■□□□□ 0.2
TSFM-208ENST00000543727 SUMO3P55854 103 aaPredicted RBP16.27■□□□□ 0.2
TSFM-208ENST00000543727 SRSF1Q07955 248 aaKnown RBP eCLIP16.27■□□□□ 0.2
TSFM-208ENST00000543727 GNA13Q14344 377 aa16.27■□□□□ 0.2
TSFM-208ENST00000543727 C3AR1Q16581 482 aa16.27■□□□□ 0.2
TSFM-208ENST00000543727 ZNF630Q2M218 657 aaPredicted RBP16.27■□□□□ 0.2
TSFM-208ENST00000543727 KLHL26Q53HC5 615 aa16.27■□□□□ 0.2
TSFM-208ENST00000543727 C1QL3Q5VWW1 255 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms