RNA–Protein interactions for RNA: ENST00000543356.6

GNE-206, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

TSL 1 (best) BASIC

Gene GNE, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-206ENST00000543356 PCDH17O14917 1159 aa8.65□□□□□ -1.03
GNE-206ENST00000543356 NID1P14543 1247 aa8.65□□□□□ -1.03
GNE-206ENST00000543356 IL7RP16871 459 aa8.65□□□□□ -1.03
GNE-206ENST00000543356 CSTF2P33240 577 aaKnown RBP eCLIP8.65□□□□□ -1.03
GNE-206ENST00000543356 SLC37A1P57057 533 aa8.65□□□□□ -1.03
GNE-206ENST00000543356 GPR68Q15743 365 aa8.65□□□□□ -1.03
GNE-206ENST00000543356 ZNF691Q5VV52 312 aa8.65□□□□□ -1.03
GNE-206ENST00000543356 FIGNL1Q6PIW4 674 aa8.65□□□□□ -1.03
GNE-206ENST00000543356 TMEM151BQ8IW70 566 aa8.65□□□□□ -1.03
GNE-206ENST00000543356 LINC00471Q8N535 108 aa8.65□□□□□ -1.03
GNE-206ENST00000543356 BMPERQ8N8U9 685 aa8.65□□□□□ -1.03
GNE-206ENST00000543356 AGBL5Q8NDL9 886 aa8.65□□□□□ -1.03
GNE-206ENST00000543356 ART5Q96L15 291 aa8.65□□□□□ -1.03
GNE-206ENST00000543356 SLC46A1Q96NT5 459 aa8.65□□□□□ -1.03
GNE-206ENST00000543356 PITX2Q99697 317 aa8.65□□□□□ -1.03
GNE-206ENST00000543356 YTHDF1Q9BYJ9 559 aaKnown RBP8.65□□□□□ -1.03
GNE-206ENST00000543356 MRPS26Q9BYN8 205 aaKnown RBP8.65□□□□□ -1.03
GNE-206ENST00000543356 POLR2J2Q9GZM3 115 aaKnown RBP8.65□□□□□ -1.03
GNE-206ENST00000543356 VN1R1Q9GZP7 353 aa8.65□□□□□ -1.03
GNE-206ENST00000543356 RBM38Q9H0Z9 239 aaKnown RBP8.65□□□□□ -1.03
GNE-206ENST00000543356 POLR2J3Q9H1A7 115 aaKnown RBP8.65□□□□□ -1.03
GNE-206ENST00000543356 RIBC2Q9H4K1 309 aa8.65□□□□□ -1.03
GNE-206ENST00000543356 Q9N2J8 555 aa8.65□□□□□ -1.03
GNE-206ENST00000543356 PNO1Q9NRX1 252 aaKnown RBP8.65□□□□□ -1.03
GNE-206ENST00000543356 OCIAD1Q9NX40 245 aa8.65□□□□□ -1.03
GNE-206ENST00000543356 CTSFQ9UBX1 484 aa8.65□□□□□ -1.03
GNE-206ENST00000543356 CFL2Q9Y281 166 aa8.65□□□□□ -1.03
GNE-206ENST00000543356 DTX4Q9Y2E6 619 aa8.65□□□□□ -1.03
GNE-206ENST00000543356 GPR55Q9Y2T6 319 aaPredicted RBP8.65□□□□□ -1.03
GNE-206ENST00000543356 PCDHGA10Q9Y5H3 936 aa8.65□□□□□ -1.03
GNE-206ENST00000543356 ASXL3Q9C0F0 2248 aa8.64□□□□□ -1.03
GNE-206ENST00000543356 ZDBF2Q9HCK1 2354 aa8.64□□□□□ -1.03
GNE-206ENST00000543356 TRBV4-1A0A0J9YWV2 114 aa8.64□□□□□ -1.03
GNE-206ENST00000543356 TRIM64A6NGJ6 449 aa8.64□□□□□ -1.03
GNE-206ENST00000543356 EFCAB7A8K855 629 aa8.64□□□□□ -1.03
GNE-206ENST00000543356 FAM47E-STBD1D6RA91 191 aa8.64□□□□□ -1.03
GNE-206ENST00000543356 CBFA2T3O75081 653 aa8.64□□□□□ -1.03
GNE-206ENST00000543356 DDAH2O95865 285 aa8.64□□□□□ -1.03
GNE-206ENST00000543356 IGKV3-11P04433 115 aa8.64□□□□□ -1.03
GNE-206ENST00000543356 CT45A8P0DMV1 189 aa8.64□□□□□ -1.03
GNE-206ENST00000543356 CT45A9P0DMV2 189 aa8.64□□□□□ -1.03
GNE-206ENST00000543356 SLC5A2P31639 672 aa8.64□□□□□ -1.03
GNE-206ENST00000543356 DCDP81605 110 aaKnown RBP8.64□□□□□ -1.03
GNE-206ENST00000543356 APOFQ13790 326 aa8.64□□□□□ -1.03
GNE-206ENST00000543356 MAPK14Q16539 360 aa8.64□□□□□ -1.03
GNE-206ENST00000543356 ANKDD1AQ495B1 522 aa8.64□□□□□ -1.03
GNE-206ENST00000543356 NKAIN1Q4KMZ8 207 aa8.64□□□□□ -1.03
GNE-206ENST00000543356 CT45A2Q5DJT8 189 aa8.64□□□□□ -1.03
GNE-206ENST00000543356 DCST1Q5T197 706 aa8.64□□□□□ -1.03
GNE-206ENST00000543356 TTC33Q6PID6 262 aaPredicted RBP8.64□□□□□ -1.03
GNE-206ENST00000543356 THAP5Q7Z6K1 395 aa8.64□□□□□ -1.03
GNE-206ENST00000543356 PARP8Q8N3A8 854 aa8.64□□□□□ -1.03
GNE-206ENST00000543356 SLC38A9Q8NBW4 561 aa8.64□□□□□ -1.03
GNE-206ENST00000543356 OR9Q2Q8NGE9 314 aa8.64□□□□□ -1.03
GNE-206ENST00000543356 RHBDD1Q8TEB9 315 aa8.64□□□□□ -1.03
GNE-206ENST00000543356 OIT3Q8WWZ8 545 aa8.64□□□□□ -1.03
GNE-206ENST00000543356 SENP5Q96HI0 755 aaPredicted RBP8.64□□□□□ -1.03
GNE-206ENST00000543356 G6PC3Q9BUM1 346 aa8.64□□□□□ -1.03
GNE-206ENST00000543356 FNDC11Q9BVV2 318 aa8.64□□□□□ -1.03
GNE-206ENST00000543356 ITPAQ9BY32 194 aa8.64□□□□□ -1.03
GNE-206ENST00000543356 ANKRD19PQ9H560 264 aa8.64□□□□□ -1.03
GNE-206ENST00000543356 FBXO34Q9NWN3 711 aa8.64□□□□□ -1.03
GNE-206ENST00000543356 ENOPH1Q9UHY7 261 aa8.64□□□□□ -1.03
GNE-206ENST00000543356 HSPE1-MOB4S4R3N1 261 aa8.64□□□□□ -1.03
GNE-206ENST00000543356 VCANP13611 3396 aa8.64□□□□□ -1.03
GNE-206ENST00000543356 CENPVL1A0A0U1RR11 272 aa8.64□□□□□ -1.03
GNE-206ENST00000543356 ANKRD34BA5PLL1 514 aa8.64□□□□□ -1.03
GNE-206ENST00000543356 ADAP00813 363 aa8.64□□□□□ -1.03
GNE-206ENST00000543356 CYC1P08574 325 aa8.64□□□□□ -1.03
GNE-206ENST00000543356 ZNF806P0C7X5 589 aa8.64□□□□□ -1.03
GNE-206ENST00000543356 RYKP34925 604 aa8.64□□□□□ -1.03
GNE-206ENST00000543356 CLK3P49761 638 aaKnown RBP8.64□□□□□ -1.03
GNE-206ENST00000543356 PSMD4P55036 377 aaKnown RBP8.64□□□□□ -1.03
GNE-206ENST00000543356 RGS8P57771 180 aaPredicted RBP8.64□□□□□ -1.03
GNE-206ENST00000543356 CTAG1AP78358 180 aa8.64□□□□□ -1.03
GNE-206ENST00000543356 NPRL3Q12980 569 aa8.64□□□□□ -1.03
GNE-206ENST00000543356 PIN1Q13526 163 aaPredicted RBP8.64□□□□□ -1.03
GNE-206ENST00000543356 NSDHLQ15738 373 aa8.64□□□□□ -1.03
GNE-206ENST00000543356 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.64□□□□□ -1.03
GNE-206ENST00000543356 ZSWIM7Q19AV6 140 aa8.64□□□□□ -1.03
GNE-206ENST00000543356 FLYWCH1Q4VC44 716 aa8.64□□□□□ -1.03
GNE-206ENST00000543356 FGD3Q5JSP0 725 aa8.64□□□□□ -1.03
GNE-206ENST00000543356 B3GNT8Q7Z7M8 397 aa8.64□□□□□ -1.03
GNE-206ENST00000543356 GRAMD2AQ8IUY3 354 aa8.64□□□□□ -1.03
GNE-206ENST00000543356 ZNF786Q8N393 782 aa8.64□□□□□ -1.03
GNE-206ENST00000543356 CLIP4Q8N3C7 705 aa8.64□□□□□ -1.03
GNE-206ENST00000543356 SETD9Q8NE22 299 aa8.64□□□□□ -1.03
GNE-206ENST00000543356 STT3BQ8TCJ2 826 aa8.64□□□□□ -1.03
GNE-206ENST00000543356 SLC2A12Q8TD20 617 aa8.64□□□□□ -1.03
GNE-206ENST00000543356 ZNF721Q8TF20 911 aa8.64□□□□□ -1.03
GNE-206ENST00000543356 FBLIM1Q8WUP2 373 aa8.64□□□□□ -1.03
GNE-206ENST00000543356 DAZLQ92904 295 aaKnown RBP8.64□□□□□ -1.03
GNE-206ENST00000543356 ZNF556Q9HAH1 456 aa8.64□□□□□ -1.03
GNE-206ENST00000543356 MAN2C1Q9NTJ4 1040 aa8.64□□□□□ -1.03
GNE-206ENST00000543356 RLIMQ9NVW2 624 aa8.64□□□□□ -1.03
GNE-206ENST00000543356 KCNE5Q9UJ90 142 aa8.64□□□□□ -1.03
GNE-206ENST00000543356 MKL2Q9ULH7 1088 aa8.64□□□□□ -1.03
GNE-206ENST00000543356 NDRG4Q9ULP0 352 aaKnown RBP8.64□□□□□ -1.03
GNE-206ENST00000543356 MGAT4BQ9UQ53 548 aa8.64□□□□□ -1.03
GNE-206ENST00000543356 CLCA3PQ9Y6N3 262 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms