RNA–Protein interactions for RNA: ENST00000542495.5

ATPAF1-212, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-212ENST00000542495 KIR2DL3P43628 341 aa4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 EVX1P49640 407 aa4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 PRKAG1P54619 331 aa4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 TAS2R41P59536 307 aa4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 PRR5P85299 388 aa4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 BDH1Q02338 343 aa4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 TGM3Q08188 693 aa4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 MAP4K2Q12851 820 aa4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 ENPP2Q13822 863 aa4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 FGL2Q14314 439 aa4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 IRF4Q15306 451 aa4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 TAB1Q15750 504 aa4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 PGGHGQ32M88 737 aa4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 TBRG1Q3YBR2 411 aa4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 GPAT3Q53EU6 434 aa4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 C2orf27AQ580R0 203 aa4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 EOGTQ5NDL2 527 aa4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 C9orf50Q5SZB4 431 aa4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 PDZK1Q5T2W1 519 aa4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 C18orf63Q68DL7 685 aa4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 VASNQ6EMK4 673 aa4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 ZNF425Q6IV72 752 aa4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 MRPL14Q6P1L8 145 aaKnown RBP4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 TMEM107Q6UX40 140 aa4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 ZNF620Q6ZNG0 422 aa4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 MBOAT2Q6ZWT7 520 aa4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 TRILQ7L0X0 811 aa4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 SZRD1Q7Z422 152 aa4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 HMGN2P46Q86SG4 172 aa4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 MEX3DQ86XN8 651 aaKnown RBP4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 VRK2Q86Y07 508 aa4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 MFSD9Q8NBP5 474 aa4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 SRFBP1Q8NEF9 429 aaKnown RBP4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 DUSP18Q8NEJ0 188 aa4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 NUP43Q8NFH3 380 aa4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 OR2L3Q8NG85 312 aa4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 LILRB4Q8NHJ6 448 aa4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 PIGXQ8TBF5 258 aa4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 DNAJA4Q8WW22 397 aaPredicted RBP4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 ACOT11Q8WXI4 607 aaPredicted RBP4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 SUSD6Q92537 303 aa4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 RFKQ969G6 155 aa4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 ZG16BQ96DA0 208 aa4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 CHFRQ96EP1 664 aa4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 SENP5Q96HI0 755 aaPredicted RBP4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 FAM46AQ96IP4 442 aaKnown RBP4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 ZFYVE19Q96K21 471 aa4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 C10orf90Q96M02 699 aa4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 C12orf66Q96MD2 445 aa4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 UBL7Q96S82 380 aaPredicted RBP4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 DCLRE1CQ96SD1 692 aaKnown RBP4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 KCNJ15Q99712 375 aa4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 YIPF4Q9BSR8 244 aa4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 TRAF4Q9BUZ4 470 aaPredicted RBP4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 ACTRT3Q9BYD9 372 aa4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 TWSG1Q9GZX9 223 aa4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 BTBD1Q9H0C5 482 aa4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 QRSL1Q9H0R6 528 aaKnown RBP4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 RSPH9Q9H1X1 276 aaPredicted RBP4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 MMP28Q9H239 520 aa4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 XKR8Q9H6D3 395 aa4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 RNF121Q9H920 327 aa4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 RMI1Q9H9A7 625 aa4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 MRPS30Q9NP92 439 aaKnown RBP4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 CTPS2Q9NRF8 586 aa4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 ACTR10Q9NZ32 417 aa4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 APOBEC3BQ9UH17 382 aaKnown RBP4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 CBLCQ9ULV8 474 aa4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 NDRG2Q9UN36 371 aaKnown RBP4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 ENTPD4Q9Y227 616 aa4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 POLHQ9Y253 713 aa4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 SLC17A4Q9Y2C5 497 aa4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 GPR52Q9Y2T5 361 aa4.85□□□□□ -1.63
ATPAF1-212ENST00000542495 LAMA2P24043 3122 aaKnown RBP4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 SHISA3A0PJX4 238 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 GSAPA4D1B5 854 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 ANTXRLA6NF34 631 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 FIGNL2A6NMB9 653 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 CPSF4LA6NMK7 179 aaKnown RBP4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 C5orf67F2Z3F1 127 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 CHST10O43529 356 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 FRS3O43559 492 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 AKAP8O43823 692 aaKnown RBP4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 RNGTTO60942 597 aaKnown RBP4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 TRIM3O75382 744 aaPredicted RBP4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 ERAL1O75616 437 aaKnown RBP4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 APOL3O95236 402 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 NTN1O95631 604 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 HLA-DPB1P04440 258 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 SERPIND1P05546 499 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 CEACAM5P06731 702 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 ALPPL2P10696 532 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 GNSP15586 552 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 CERS1P27544 350 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 APEX1P27695 318 aaKnown RBP4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 SSTR4P31391 388 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 MPIP34949 423 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 PTGER1P34995 402 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 MC3RP41968 323 aa4.84□□□□□ -1.63
ATPAF1-212ENST00000542495 CDH11P55287 796 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms