RNA–Protein interactions for RNA: ENST00000542244.5

DDX11-220, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 1 (best)

Gene DDX11, Length 1,193 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-220ENST00000542244 HOXB13Q92826 284 aaPredicted RBP17.87■□□□□ 0.45
DDX11-220ENST00000542244 MARK4Q96L34 752 aa17.87■□□□□ 0.45
DDX11-220ENST00000542244 FCRL1Q96LA6 429 aa17.87■□□□□ 0.45
DDX11-220ENST00000542244 TSSK3Q96PN8 268 aa17.87■□□□□ 0.45
DDX11-220ENST00000542244 FAM111AQ96PZ2 611 aa17.87■□□□□ 0.45
DDX11-220ENST00000542244 GATA5Q9BWX5 397 aaPredicted RBP17.87■□□□□ 0.45
DDX11-220ENST00000542244 ACBD3Q9H3P7 528 aa17.87■□□□□ 0.45
DDX11-220ENST00000542244 RNF122Q9H9V4 155 aa17.87■□□□□ 0.45
DDX11-220ENST00000542244 LRTM1Q9HBL6 345 aa17.87■□□□□ 0.45
DDX11-220ENST00000542244 CLEC4AQ9UMR7 237 aa17.87■□□□□ 0.45
DDX11-220ENST00000542244 VDAC3Q9Y277 283 aa17.87■□□□□ 0.45
DDX11-220ENST00000542244 TNFRSF21O75509 655 aa17.86■□□□□ 0.45
DDX11-220ENST00000542244 LINC00032P0C843 101 aa17.86■□□□□ 0.45
DDX11-220ENST00000542244 UROSP10746 265 aa17.86■□□□□ 0.45
DDX11-220ENST00000542244 CD79BP40259 229 aa17.86■□□□□ 0.45
DDX11-220ENST00000542244 PCLAFQ15004 111 aa17.86■□□□□ 0.45
DDX11-220ENST00000542244 CFAP157Q5JU67 520 aa17.86■□□□□ 0.45
DDX11-220ENST00000542244 FIGNL1Q6PIW4 674 aa17.86■□□□□ 0.45
DDX11-220ENST00000542244 CHMP1BQ7LBR1 199 aa17.86■□□□□ 0.45
DDX11-220ENST00000542244 KIF18AQ8NI77 898 aa17.86■□□□□ 0.45
DDX11-220ENST00000542244 CCDC126Q96EE4 140 aa17.86■□□□□ 0.45
DDX11-220ENST00000542244 PIK3IP1Q96FE7 263 aa17.86■□□□□ 0.45
DDX11-220ENST00000542244 ZC3HAV1LQ96H79 300 aaKnown RBP17.86■□□□□ 0.45
DDX11-220ENST00000542244 RRAGDQ9NQL2 400 aaPredicted RBP17.86■□□□□ 0.45
DDX11-220ENST00000542244 IGLV3-32A0A0A0MS00 114 aa17.85■□□□□ 0.45
DDX11-220ENST00000542244 PDPK1O15530 556 aa17.85■□□□□ 0.45
DDX11-220ENST00000542244 NKX2-2O95096 273 aa17.85■□□□□ 0.45
DDX11-220ENST00000542244 CHRNGP07510 517 aa17.85■□□□□ 0.45
DDX11-220ENST00000542244 PRPH2P23942 346 aa17.85■□□□□ 0.45
DDX11-220ENST00000542244 UGT2B10P36537 528 aa17.85■□□□□ 0.45
DDX11-220ENST00000542244 PSPHP78330 225 aa17.85■□□□□ 0.45
DDX11-220ENST00000542244 PRR5P85299 388 aa17.85■□□□□ 0.45
DDX11-220ENST00000542244 CCNJQ5T5M9 372 aa17.85■□□□□ 0.45
DDX11-220ENST00000542244 IKBIPQ70UQ0 350 aa17.85■□□□□ 0.45
DDX11-220ENST00000542244 CIARTQ8N365 385 aaPredicted RBP17.85■□□□□ 0.45
DDX11-220ENST00000542244 CCDC63Q8NA47 563 aa17.85■□□□□ 0.45
DDX11-220ENST00000542244 SLC16A11Q8NCK7 471 aa17.85■□□□□ 0.45
DDX11-220ENST00000542244 OR2W6PQ8NHA6 318 aa17.85■□□□□ 0.45
DDX11-220ENST00000542244 GPR151Q8TDV0 419 aa17.85■□□□□ 0.45
DDX11-220ENST00000542244 UBLCP1Q8WVY7 318 aaPredicted RBP17.85■□□□□ 0.45
DDX11-220ENST00000542244 SDHAF3Q9NRP4 125 aa17.85■□□□□ 0.45
DDX11-220ENST00000542244 C1orf109Q9NX04 203 aa17.85■□□□□ 0.45
DDX11-220ENST00000542244 CASKO14936 926 aa17.84■□□□□ 0.45
DDX11-220ENST00000542244 OXSR1O95747 527 aaPredicted RBP17.84■□□□□ 0.45
DDX11-220ENST00000542244 CRHP06850 196 aa17.84■□□□□ 0.45
DDX11-220ENST00000542244 THBDP07204 575 aa17.84■□□□□ 0.45
DDX11-220ENST00000542244 PRPS2P11908 318 aa17.84■□□□□ 0.45
DDX11-220ENST00000542244 KRT4P19013 534 aa17.84■□□□□ 0.45
DDX11-220ENST00000542244 IL11P20809 199 aa17.84■□□□□ 0.45
DDX11-220ENST00000542244 ARRB2P32121 409 aa17.84■□□□□ 0.45
DDX11-220ENST00000542244 NKX6-1P78426 367 aaPredicted RBP17.84■□□□□ 0.45
DDX11-220ENST00000542244 ZNHIT3Q15649 155 aaPredicted RBP17.84■□□□□ 0.45
DDX11-220ENST00000542244 DUSP5Q16690 384 aa17.84■□□□□ 0.45
DDX11-220ENST00000542244 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.84■□□□□ 0.45
DDX11-220ENST00000542244 CTU2Q2VPK5 515 aaKnown RBP17.84■□□□□ 0.45
DDX11-220ENST00000542244 CCDC153Q494R4 210 aa17.84■□□□□ 0.45
DDX11-220ENST00000542244 OR2A2Q6IF42 318 aa17.84■□□□□ 0.45
DDX11-220ENST00000542244 METTL25Q8N6Q8 603 aa17.84■□□□□ 0.45
DDX11-220ENST00000542244 NUP43Q8NFH3 380 aa17.84■□□□□ 0.45
DDX11-220ENST00000542244 POC1BQ8TC44 478 aa17.84■□□□□ 0.45
DDX11-220ENST00000542244 FAM110BQ8TC76 370 aa17.84■□□□□ 0.45
DDX11-220ENST00000542244 TBL1XR1Q9BZK7 514 aa17.84■□□□□ 0.45
DDX11-220ENST00000542244 REEP4Q9H6H4 257 aa17.84■□□□□ 0.45
DDX11-220ENST00000542244 SIRT3Q9NTG7 399 aaPredicted RBP17.84■□□□□ 0.45
DDX11-220ENST00000542244 NDRG3Q9UGV2 375 aa17.84■□□□□ 0.45
DDX11-220ENST00000542244 DNAJC15Q9Y5T4 150 aa17.84■□□□□ 0.45
DDX11-220ENST00000542244 COPEO14579 308 aa17.83■□□□□ 0.44
DDX11-220ENST00000542244 EIF1AYO14602 144 aaKnown RBP17.83■□□□□ 0.44
DDX11-220ENST00000542244 AZIN1O14977 448 aa17.83■□□□□ 0.44
DDX11-220ENST00000542244 EMC8O43402 210 aa17.83■□□□□ 0.44
DDX11-220ENST00000542244 OIP5O43482 229 aa17.83■□□□□ 0.44
DDX11-220ENST00000542244 SLITRK5O94991 958 aa17.83■□□□□ 0.44
DDX11-220ENST00000542244 KCNK2O95069 426 aa17.83■□□□□ 0.44
DDX11-220ENST00000542244 POU2F1P14859 743 aa17.83■□□□□ 0.44
DDX11-220ENST00000542244 FOSL1P15407 271 aa17.83■□□□□ 0.44
DDX11-220ENST00000542244 CRYGSP22914 178 aa17.83■□□□□ 0.44
DDX11-220ENST00000542244 PSMA4P25789 261 aaKnown RBP17.83■□□□□ 0.44
DDX11-220ENST00000542244 SHC1P29353 583 aa17.83■□□□□ 0.44
DDX11-220ENST00000542244 GPC1P35052 558 aa17.83■□□□□ 0.44
DDX11-220ENST00000542244 FRKP42685 505 aaPredicted RBP17.83■□□□□ 0.44
DDX11-220ENST00000542244 RPL38P63173 70 aaKnown RBP17.83■□□□□ 0.44
DDX11-220ENST00000542244 SLC18A2Q05940 514 aa17.83■□□□□ 0.44
DDX11-220ENST00000542244 PDE7AQ13946 482 aa17.83■□□□□ 0.44
DDX11-220ENST00000542244 GANABQ14697 944 aaKnown RBP17.83■□□□□ 0.44
DDX11-220ENST00000542244 CD226Q15762 336 aa17.83■□□□□ 0.44
DDX11-220ENST00000542244 UGT3A2Q3SY77 523 aa17.83■□□□□ 0.44
DDX11-220ENST00000542244 EXOSC6Q5RKV6 272 aaKnown RBP17.83■□□□□ 0.44
DDX11-220ENST00000542244 LIPMQ5VYY2 423 aa17.83■□□□□ 0.44
DDX11-220ENST00000542244 KANK2Q63ZY3 851 aa17.83■□□□□ 0.44
DDX11-220ENST00000542244 ZNF524Q96C55 264 aa17.83■□□□□ 0.44
DDX11-220ENST00000542244 ADGRG7Q96K78 797 aa17.83■□□□□ 0.44
DDX11-220ENST00000542244 MECRQ9BV79 373 aa17.83■□□□□ 0.44
DDX11-220ENST00000542244 TMEM185BQ9H7F4 350 aa17.83■□□□□ 0.44
DDX11-220ENST00000542244 PTGES2Q9H7Z7 377 aa17.83■□□□□ 0.44
DDX11-220ENST00000542244 NEUROD4Q9HD90 331 aa17.83■□□□□ 0.44
DDX11-220ENST00000542244 SH3BP4Q9P0V3 963 aa17.83■□□□□ 0.44
DDX11-220ENST00000542244 EDARQ9UNE0 448 aa17.83■□□□□ 0.44
DDX11-220ENST00000542244 EIF3LQ9Y262 564 aaKnown RBP17.83■□□□□ 0.44
DDX11-220ENST00000542244 WBP11Q9Y2W2 641 aaKnown RBP17.83■□□□□ 0.44
DDX11-220ENST00000542244 ZNF175Q9Y473 711 aa17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 99.2 ms