RNA–Protein interactions for RNA: ENST00000542188.5

TRPM1-203, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 6,004 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-203ENST00000542188 COQ4Q9Y3A0 265 aa13.38□□□□□ -0.27
TRPM1-203ENST00000542188 ANKRD30BLA7E2S9 258 aa13.38□□□□□ -0.27
TRPM1-203ENST00000542188 CPNE6O95741 557 aa13.38□□□□□ -0.27
TRPM1-203ENST00000542188 PNMTP11086 282 aa13.38□□□□□ -0.27
TRPM1-203ENST00000542188 BMP2P12643 396 aa13.38□□□□□ -0.27
TRPM1-203ENST00000542188 BCKDHBP21953 392 aa13.38□□□□□ -0.27
TRPM1-203ENST00000542188 CNR2P34972 360 aa13.38□□□□□ -0.27
TRPM1-203ENST00000542188 APLNRP35414 380 aa13.38□□□□□ -0.27
TRPM1-203ENST00000542188 MRPL21Q7Z2W9 205 aaKnown RBP13.38□□□□□ -0.27
TRPM1-203ENST00000542188 MIB2Q96AX9 1013 aa13.38□□□□□ -0.27
TRPM1-203ENST00000542188 ANKRD60Q9BZ19 345 aa13.38□□□□□ -0.27
TRPM1-203ENST00000542188 E9PCH4 1651 aa13.38□□□□□ -0.27
TRPM1-203ENST00000542188 ATRNL1Q5VV63 1379 aa13.38□□□□□ -0.27
TRPM1-203ENST00000542188 E7ESA3 106 aa13.38□□□□□ -0.27
TRPM1-203ENST00000542188 ZIC2O95409 532 aaPredicted RBP13.38□□□□□ -0.27
TRPM1-203ENST00000542188 SLC2A1P11166 492 aa13.38□□□□□ -0.27
TRPM1-203ENST00000542188 HSD17B1P14061 328 aa13.38□□□□□ -0.27
TRPM1-203ENST00000542188 AGTR2P50052 363 aa13.38□□□□□ -0.27
TRPM1-203ENST00000542188 OR4D2P58180 307 aa13.38□□□□□ -0.27
TRPM1-203ENST00000542188 CTXN1P60606 82 aa13.38□□□□□ -0.27
TRPM1-203ENST00000542188 SOWAHAQ2M3V2 549 aa13.38□□□□□ -0.27
TRPM1-203ENST00000542188 CYB5D2Q8WUJ1 264 aa13.38□□□□□ -0.27
TRPM1-203ENST00000542188 FAM122AQ96E09 287 aa13.38□□□□□ -0.27
TRPM1-203ENST00000542188 PINK1Q9BXM7 581 aa13.38□□□□□ -0.27
TRPM1-203ENST00000542188 IKZF4Q9H2S9 585 aa13.38□□□□□ -0.27
TRPM1-203ENST00000542188 THSD1Q9NS62 852 aa13.38□□□□□ -0.27
TRPM1-203ENST00000542188 FBXL12Q9NXK8 326 aa13.38□□□□□ -0.27
TRPM1-203ENST00000542188 HS3ST4Q9Y661 456 aa13.38□□□□□ -0.27
TRPM1-203ENST00000542188 USP32Q8NFA0 1604 aa13.38□□□□□ -0.27
TRPM1-203ENST00000542188 B4DXG7 233 aa13.37□□□□□ -0.27
TRPM1-203ENST00000542188 PIGRP01833 764 aa13.37□□□□□ -0.27
TRPM1-203ENST00000542188 HLA-HP01893 362 aa13.37□□□□□ -0.27
TRPM1-203ENST00000542188 MMP2P08253 660 aa13.37□□□□□ -0.27
TRPM1-203ENST00000542188 POLR2CP19387 275 aaPredicted RBP13.37□□□□□ -0.27
TRPM1-203ENST00000542188 DDCP20711 480 aa13.37□□□□□ -0.27
TRPM1-203ENST00000542188 IL1R2P27930 398 aa13.37□□□□□ -0.27
TRPM1-203ENST00000542188 EFNA3P52797 238 aa13.37□□□□□ -0.27
TRPM1-203ENST00000542188 C22orf39Q6P5X5 142 aa13.37□□□□□ -0.27
TRPM1-203ENST00000542188 BLOC1S3Q6QNY0 202 aa13.37□□□□□ -0.27
TRPM1-203ENST00000542188 ENPP6Q6UWR7 440 aa13.37□□□□□ -0.27
TRPM1-203ENST00000542188 TTLL10Q6ZVT0 673 aa13.37□□□□□ -0.27
TRPM1-203ENST00000542188 ADAMTS16Q8TE57 1224 aa13.37□□□□□ -0.27
TRPM1-203ENST00000542188 SMOC2Q9H3U7 446 aa13.37□□□□□ -0.27
TRPM1-203ENST00000542188 ZNF160Q9HCG1 818 aa13.37□□□□□ -0.27
TRPM1-203ENST00000542188 WASH4PA8MWX3 477 aa13.37□□□□□ -0.27
TRPM1-203ENST00000542188 CD1DP15813 335 aa13.37□□□□□ -0.27
TRPM1-203ENST00000542188 HOXD11P31277 338 aaPredicted RBP13.37□□□□□ -0.27
TRPM1-203ENST00000542188 MFGE8Q08431 387 aaPredicted RBP13.37□□□□□ -0.27
TRPM1-203ENST00000542188 OR4M1Q8NGD0 313 aa13.37□□□□□ -0.27
TRPM1-203ENST00000542188 FEVQ99581 238 aa13.37□□□□□ -0.27
TRPM1-203ENST00000542188 SIX2Q9NPC8 291 aa13.37□□□□□ -0.27
TRPM1-203ENST00000542188 ATXN7L1Q9ULK2 861 aaPredicted RBP13.37□□□□□ -0.27
TRPM1-203ENST00000542188 OR1A2Q9Y585 309 aa13.37□□□□□ -0.27
TRPM1-203ENST00000542188 F6UZH7 168 aa13.37□□□□□ -0.27
TRPM1-203ENST00000542188 LDB2O43679 373 aa13.37□□□□□ -0.27
TRPM1-203ENST00000542188 PPP1R3DO95685 299 aa13.37□□□□□ -0.27
TRPM1-203ENST00000542188 EGFP01133 1207 aa13.37□□□□□ -0.27
TRPM1-203ENST00000542188 CPT2P23786 658 aa13.37□□□□□ -0.27
TRPM1-203ENST00000542188 PRDX3P30048 256 aaKnown RBP13.37□□□□□ -0.27
TRPM1-203ENST00000542188 DUSP3P51452 185 aaPredicted RBP13.37□□□□□ -0.27
TRPM1-203ENST00000542188 ZNF92Q03936 586 aa13.37□□□□□ -0.27
TRPM1-203ENST00000542188 DCAF12L1Q5VU92 463 aa13.37□□□□□ -0.27
TRPM1-203ENST00000542188 HEPHL1Q6MZM0 1159 aa13.37□□□□□ -0.27
TRPM1-203ENST00000542188 C15orf52Q6ZUT6 534 aaKnown RBP13.37□□□□□ -0.27
TRPM1-203ENST00000542188 RPS27LQ71UM5 84 aaKnown RBP13.37□□□□□ -0.27
TRPM1-203ENST00000542188 SENP5Q96HI0 755 aaPredicted RBP13.37□□□□□ -0.27
TRPM1-203ENST00000542188 PRRC1Q96M27 445 aa13.37□□□□□ -0.27
TRPM1-203ENST00000542188 CMSS1Q9BQ75 279 aaKnown RBP13.37□□□□□ -0.27
TRPM1-203ENST00000542188 MTHFD2LQ9H903 347 aaPredicted RBP13.37□□□□□ -0.27
TRPM1-203ENST00000542188 KLHL42Q9P2K6 505 aa13.37□□□□□ -0.27
TRPM1-203ENST00000542188 GMEB2Q9UKD1 530 aa13.37□□□□□ -0.27
TRPM1-203ENST00000542188 ARHGEF15O94989 841 aa13.37□□□□□ -0.27
TRPM1-203ENST00000542188 NDUFB2O95178 105 aa13.37□□□□□ -0.27
TRPM1-203ENST00000542188 MT-ND4P03905 459 aa13.37□□□□□ -0.27
TRPM1-203ENST00000542188 PREPP48147 710 aa13.37□□□□□ -0.27
TRPM1-203ENST00000542188 ELOCQ15369 112 aa13.37□□□□□ -0.27
TRPM1-203ENST00000542188 SYPL2Q5VXT5 272 aa13.37□□□□□ -0.27
TRPM1-203ENST00000542188 OR4C11Q6IEV9 310 aa13.37□□□□□ -0.27
TRPM1-203ENST00000542188 Q6ZVU0 165 aa13.37□□□□□ -0.27
TRPM1-203ENST00000542188 DDX51Q8N8A6 666 aaKnown RBP eCLIP13.37□□□□□ -0.27
TRPM1-203ENST00000542188 SHDQ96IW2 340 aa13.37□□□□□ -0.27
TRPM1-203ENST00000542188 OR10A5Q9H207 317 aa13.37□□□□□ -0.27
TRPM1-203ENST00000542188 OR10A2Q9H208 303 aa13.37□□□□□ -0.27
TRPM1-203ENST00000542188 C1orf167Q5SNV9 1468 aa13.37□□□□□ -0.27
TRPM1-203ENST00000542188 MEIS3P2A8K0S8 358 aa13.37□□□□□ -0.27
TRPM1-203ENST00000542188 H7BY64 318 aa13.37□□□□□ -0.27
TRPM1-203ENST00000542188 RNH1P13489 461 aaKnown RBP13.37□□□□□ -0.27
TRPM1-203ENST00000542188 PPT1P50897 306 aa13.37□□□□□ -0.27
TRPM1-203ENST00000542188 TAS2R38P59533 333 aa13.37□□□□□ -0.27
TRPM1-203ENST00000542188 LRRC28Q86X40 367 aaPredicted RBP13.37□□□□□ -0.27
TRPM1-203ENST00000542188 DBF4BQ8NFT6 615 aa13.37□□□□□ -0.27
TRPM1-203ENST00000542188 OR9K2Q8NGE7 335 aa13.37□□□□□ -0.27
TRPM1-203ENST00000542188 OR52N2Q8NGI0 321 aa13.37□□□□□ -0.27
TRPM1-203ENST00000542188 SCAMP5Q8TAC9 235 aa13.37□□□□□ -0.27
TRPM1-203ENST00000542188 PRAP1Q96NZ9 151 aa13.37□□□□□ -0.27
TRPM1-203ENST00000542188 MVB12BQ9H7P6 319 aa13.37□□□□□ -0.27
TRPM1-203ENST00000542188 MOB1AQ9H8S9 216 aa13.37□□□□□ -0.27
TRPM1-203ENST00000542188 AK6Q9Y3D8 172 aaKnown RBP13.37□□□□□ -0.27
TRPM1-203ENST00000542188 TNS2Q63HR2 1409 aa13.36□□□□□ -0.27
TRPM1-203ENST00000542188 A0A087WZY1 265 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms