RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 RMND5BQ96G75 393 aaPredicted RBP25.68■■□□□ 1.7
CCM2-218ENST00000541586 ZNF347Q96SE7 839 aa25.68■■□□□ 1.7
CCM2-218ENST00000541586 PINK1Q9BXM7 581 aa25.68■■□□□ 1.7
CCM2-218ENST00000541586 ITPAQ9BY32 194 aa25.68■■□□□ 1.7
CCM2-218ENST00000541586 SAP130Q9H0E3 1048 aa25.68■■□□□ 1.7
CCM2-218ENST00000541586 P4HTMQ9NXG6 502 aa25.68■■□□□ 1.7
CCM2-218ENST00000541586 ENPP4Q9Y6X5 453 aa25.68■■□□□ 1.7
CCM2-218ENST00000541586 MASP2O00187 686 aa25.67■■□□□ 1.7
CCM2-218ENST00000541586 SEC24DO94855 1032 aaPredicted RBP25.67■■□□□ 1.7
CCM2-218ENST00000541586 KCNK2O95069 426 aa25.67■■□□□ 1.7
CCM2-218ENST00000541586 EPPINO95925 133 aa25.67■■□□□ 1.7
CCM2-218ENST00000541586 CYC1P08574 325 aa25.67■■□□□ 1.7
CCM2-218ENST00000541586 CT45A8P0DMV1 189 aa25.67■■□□□ 1.7
CCM2-218ENST00000541586 CT45A9P0DMV2 189 aa25.67■■□□□ 1.7
CCM2-218ENST00000541586 YAP1P46937 504 aaKnown RBP25.67■■□□□ 1.7
CCM2-218ENST00000541586 ATP1A4Q13733 1029 aa25.67■■□□□ 1.7
CCM2-218ENST00000541586 CT45A2Q5DJT8 189 aa25.67■■□□□ 1.7
CCM2-218ENST00000541586 CMPK2Q5EBM0 449 aa25.67■■□□□ 1.7
CCM2-218ENST00000541586 MRGPREQ86SM8 312 aa25.67■■□□□ 1.7
CCM2-218ENST00000541586 CARM1Q86X55 608 aa25.67■■□□□ 1.7
CCM2-218ENST00000541586 OR4N2Q8NGD1 307 aa25.67■■□□□ 1.7
CCM2-218ENST00000541586 SDCCAG3Q96C92 435 aa25.67■■□□□ 1.7
CCM2-218ENST00000541586 ZNF570Q96NI8 536 aa25.67■■□□□ 1.7
CCM2-218ENST00000541586 WFDC6Q9BQY6 131 aa25.67■■□□□ 1.7
CCM2-218ENST00000541586 SSUH2Q9Y2M2 353 aa25.67■■□□□ 1.7
CCM2-218ENST00000541586 GPR68Q15743 365 aa25.66■■□□□ 1.7
CCM2-218ENST00000541586 ZNF619Q8N2I2 560 aa25.66■■□□□ 1.7
CCM2-218ENST00000541586 OR4D11Q8NGI4 311 aa25.66■■□□□ 1.7
CCM2-218ENST00000541586 OR52P1PQ8NH57 321 aa25.66■■□□□ 1.7
CCM2-218ENST00000541586 NACC2Q96BF6 587 aa25.66■■□□□ 1.7
CCM2-218ENST00000541586 REEP1Q9H902 201 aa25.66■■□□□ 1.7
CCM2-218ENST00000541586 SAMHD1Q9Y3Z3 626 aaKnown RBP25.66■■□□□ 1.7
CCM2-218ENST00000541586 J3KTA2 159 aa25.66■■□□□ 1.7
CCM2-218ENST00000541586 LGI1O95970 557 aa25.66■■□□□ 1.7
CCM2-218ENST00000541586 RRM2P31350 389 aa25.66■■□□□ 1.7
CCM2-218ENST00000541586 TRHRP34981 398 aaPredicted RBP25.66■■□□□ 1.7
CCM2-218ENST00000541586 HSPA13P48723 471 aa25.66■■□□□ 1.7
CCM2-218ENST00000541586 SHQ1Q6PI26 577 aaKnown RBP25.66■■□□□ 1.7
CCM2-218ENST00000541586 LACC1Q8IV20 430 aa25.66■■□□□ 1.7
CCM2-218ENST00000541586 VANGL1Q8TAA9 524 aaPredicted RBP25.66■■□□□ 1.7
CCM2-218ENST00000541586 MAGEE2Q8TD90 523 aaPredicted RBP25.66■■□□□ 1.7
CCM2-218ENST00000541586 Q9N2J8 555 aa25.66■■□□□ 1.7
CCM2-218ENST00000541586 FBXL4Q9UKA2 621 aa25.66■■□□□ 1.7
CCM2-218ENST00000541586 TESMINQ9Y4I5 508 aa25.66■■□□□ 1.7
CCM2-218ENST00000541586 LOC400499M0QZD8 3231 aa25.65■■□□□ 1.7
CCM2-218ENST00000541586 A0A087WV48 116 aa25.65■■□□□ 1.7
CCM2-218ENST00000541586 IGHV1-45A0A0A0MS14 117 aa25.65■■□□□ 1.7
CCM2-218ENST00000541586 TTC36A6NLP5 189 aa25.65■■□□□ 1.7
CCM2-218ENST00000541586 KIAA0513O60268 411 aa25.65■■□□□ 1.7
CCM2-218ENST00000541586 DNAJB5O75953 348 aa25.65■■□□□ 1.7
CCM2-218ENST00000541586 UQCRBP14927 111 aa25.65■■□□□ 1.7
CCM2-218ENST00000541586 DNAJA1P31689 397 aaKnown RBP25.65■■□□□ 1.7
CCM2-218ENST00000541586 NNATQ16517 81 aa25.65■■□□□ 1.7
CCM2-218ENST00000541586 PAPD4Q6PIY7 484 aaKnown RBP25.65■■□□□ 1.7
CCM2-218ENST00000541586 HIPK1Q86Z02 1210 aa25.65■■□□□ 1.7
CCM2-218ENST00000541586 RBM45Q8IUH3 476 aaKnown RBP25.65■■□□□ 1.7
CCM2-218ENST00000541586 PEX5LQ8IYB4 626 aa25.65■■□□□ 1.7
CCM2-218ENST00000541586 ART5Q96L15 291 aa25.65■■□□□ 1.7
CCM2-218ENST00000541586 LPAR4Q99677 370 aa25.65■■□□□ 1.7
CCM2-218ENST00000541586 PIP5K1AQ99755 562 aa25.65■■□□□ 1.7
CCM2-218ENST00000541586 NUDT9Q9BW91 350 aa25.65■■□□□ 1.7
CCM2-218ENST00000541586 TRIM45Q9H8W5 580 aaPredicted RBP25.65■■□□□ 1.7
CCM2-218ENST00000541586 POLE3Q9NRF9 147 aa25.65■■□□□ 1.7
CCM2-218ENST00000541586 ZMIZ1Q9ULJ6 1067 aa25.65■■□□□ 1.7
CCM2-218ENST00000541586 LRCH1Q9Y2L9 728 aa25.65■■□□□ 1.7
CCM2-218ENST00000541586 IFT52Q9Y366 437 aa25.65■■□□□ 1.7
CCM2-218ENST00000541586 FAM32AQ9Y421 112 aaKnown RBP25.65■■□□□ 1.7
CCM2-218ENST00000541586 LOC102723996A0A087X1L8 192 aa25.64■■□□□ 1.7
CCM2-218ENST00000541586 NSG1A0A0A6YYJ2 146 aa25.64■■□□□ 1.7
CCM2-218ENST00000541586 AGAP5A6NIR3 686 aa25.64■■□□□ 1.7
CCM2-218ENST00000541586 DLGAP1O14490 977 aa25.64■■□□□ 1.7
CCM2-218ENST00000541586 PCDH17O14917 1159 aa25.64■■□□□ 1.7
CCM2-218ENST00000541586 ADAMDEC1O15204 470 aa25.64■■□□□ 1.7
CCM2-218ENST00000541586 COX6A1P12074 109 aa25.64■■□□□ 1.7
CCM2-218ENST00000541586 RHCEP18577 417 aa25.64■■□□□ 1.7
CCM2-218ENST00000541586 PRKAR1BP31321 381 aa25.64■■□□□ 1.7
CCM2-218ENST00000541586 CDC20Q12834 499 aa25.64■■□□□ 1.7
CCM2-218ENST00000541586 DAG1Q14118 895 aa25.64■■□□□ 1.7
CCM2-218ENST00000541586 AP1ARQ63HQ0 302 aa25.64■■□□□ 1.7
CCM2-218ENST00000541586 DHRS4L2Q6PKH6 230 aa25.64■■□□□ 1.7
CCM2-218ENST00000541586 NDUFAF7Q7L592 441 aa25.64■■□□□ 1.7
CCM2-218ENST00000541586 ZAR1Q86SH2 424 aa25.64■■□□□ 1.7
CCM2-218ENST00000541586 IP6K3Q96PC2 410 aa25.64■■□□□ 1.7
CCM2-218ENST00000541586 ZNF160Q9HCG1 818 aa25.64■■□□□ 1.7
CCM2-218ENST00000541586 ZNF443Q9Y2A4 671 aaPredicted RBP25.64■■□□□ 1.7
CCM2-218ENST00000541586 SLC9A8Q9Y2E8 581 aa25.64■■□□□ 1.7
CCM2-218ENST00000541586 GPR55Q9Y2T6 319 aaPredicted RBP25.64■■□□□ 1.7
CCM2-218ENST00000541586 CHST2Q9Y4C5 530 aa25.64■■□□□ 1.7
CCM2-218ENST00000541586 CENPVL1A0A0U1RR11 272 aa25.63■■□□□ 1.69
CCM2-218ENST00000541586 M0R3H8 397 aa25.63■■□□□ 1.69
CCM2-218ENST00000541586 SYT5O00445 386 aa25.63■■□□□ 1.69
CCM2-218ENST00000541586 IGKV1D-16P01601 117 aa25.63■■□□□ 1.69
CCM2-218ENST00000541586 FPR1P21462 350 aa25.63■■□□□ 1.69
CCM2-218ENST00000541586 RPS4Y1P22090 263 aaKnown RBP25.63■■□□□ 1.69
CCM2-218ENST00000541586 ALDH3A2P51648 485 aa25.63■■□□□ 1.69
CCM2-218ENST00000541586 PCOLCEQ15113 449 aa25.63■■□□□ 1.69
CCM2-218ENST00000541586 DEFB109BQ30KR1 87 aa25.63■■□□□ 1.69
CCM2-218ENST00000541586 THAP4Q8WY91 577 aa25.63■■□□□ 1.69
CCM2-218ENST00000541586 CNTNAP3BQ96NU0 1288 aa25.63■■□□□ 1.69
CCM2-218ENST00000541586 EPYCQ99645 322 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms