RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 TIGD3Q6B0B8 471 aa12.98□□□□□ -0.33
LTBR-209ENST00000541102 RTL6Q6ICC9 239 aa12.98□□□□□ -0.33
LTBR-209ENST00000541102 MFSD12Q6NUT3 480 aa12.98□□□□□ -0.33
LTBR-209ENST00000541102 SLC30A6Q6NXT4 461 aa12.98□□□□□ -0.33
LTBR-209ENST00000541102 B3GNT6Q6ZMB0 384 aa12.98□□□□□ -0.33
LTBR-209ENST00000541102 NATD1Q8N6N6 113 aa12.98□□□□□ -0.33
LTBR-209ENST00000541102 SLC16A11Q8NCK7 471 aa12.98□□□□□ -0.33
LTBR-209ENST00000541102 OR1J4Q8NGS1 313 aa12.98□□□□□ -0.33
LTBR-209ENST00000541102 GOT1L1Q8NHS2 421 aaPredicted RBP12.98□□□□□ -0.33
LTBR-209ENST00000541102 NEIL3Q8TAT5 605 aa12.98□□□□□ -0.33
LTBR-209ENST00000541102 GTF2H4Q92759 462 aa12.98□□□□□ -0.33
LTBR-209ENST00000541102 TMCO6Q96DC7 493 aa12.98□□□□□ -0.33
LTBR-209ENST00000541102 SPDL1Q96EA4 605 aa12.98□□□□□ -0.33
LTBR-209ENST00000541102 TMEM41AQ96HV5 264 aa12.98□□□□□ -0.33
LTBR-209ENST00000541102 CCT8L2Q96SF2 557 aa12.98□□□□□ -0.33
LTBR-209ENST00000541102 OSBPL11Q9BXB4 747 aa12.98□□□□□ -0.33
LTBR-209ENST00000541102 UCK2Q9BZX2 261 aa12.98□□□□□ -0.33
LTBR-209ENST00000541102 GALNT9Q9HCQ5 603 aa12.98□□□□□ -0.33
LTBR-209ENST00000541102 ZCCHC3Q9NUD5 404 aaKnown RBP12.98□□□□□ -0.33
LTBR-209ENST00000541102 TRIM33Q9UPN9 1127 aa12.98□□□□□ -0.33
LTBR-209ENST00000541102 SLC6A5Q9Y345 797 aa12.98□□□□□ -0.33
LTBR-209ENST00000541102 OR10H1Q9Y4A9 318 aa12.98□□□□□ -0.33
LTBR-209ENST00000541102 CELSR2Q9HCU4 2923 aa12.97□□□□□ -0.33
LTBR-209ENST00000541102 CREBBPQ92793 2442 aa12.97□□□□□ -0.33
LTBR-209ENST00000541102 PRAMEF25A6NGN4 478 aa12.97□□□□□ -0.33
LTBR-209ENST00000541102 CCDC154A6NI56 674 aa12.97□□□□□ -0.33
LTBR-209ENST00000541102 WDR1O75083 606 aa12.97□□□□□ -0.33
LTBR-209ENST00000541102 COQ9O75208 318 aa12.97□□□□□ -0.33
LTBR-209ENST00000541102 HMGN2P05204 90 aaKnown RBP12.97□□□□□ -0.33
LTBR-209ENST00000541102 HPNP05981 417 aa12.97□□□□□ -0.33
LTBR-209ENST00000541102 IFI6P09912 130 aa12.97□□□□□ -0.33
LTBR-209ENST00000541102 GLI4P10075 376 aa12.97□□□□□ -0.33
LTBR-209ENST00000541102 HOXB9P17482 250 aaPredicted RBP12.97□□□□□ -0.33
LTBR-209ENST00000541102 DDX5P17844 614 aaKnown RBP12.97□□□□□ -0.33
LTBR-209ENST00000541102 IL12BP29460 328 aa12.97□□□□□ -0.33
LTBR-209ENST00000541102 CHRNB4P30926 498 aa12.97□□□□□ -0.33
LTBR-209ENST00000541102 PTGDSP41222 190 aa12.97□□□□□ -0.33
LTBR-209ENST00000541102 TP53BP2Q13625 1128 aa12.97□□□□□ -0.33
LTBR-209ENST00000541102 LASP1Q14847 261 aaKnown RBP12.97□□□□□ -0.33
LTBR-209ENST00000541102 DUSP5Q16690 384 aa12.97□□□□□ -0.33
LTBR-209ENST00000541102 SPDYE7PQ495Y7 208 aa12.97□□□□□ -0.33
LTBR-209ENST00000541102 EIPR1Q53HC9 387 aa12.97□□□□□ -0.33
LTBR-209ENST00000541102 GALNT10Q86SR1 603 aa12.97□□□□□ -0.33
LTBR-209ENST00000541102 YRDCQ86U90 279 aaKnown RBP12.97□□□□□ -0.33
LTBR-209ENST00000541102 MTDHQ86UE4 582 aaKnown RBP12.97□□□□□ -0.33
LTBR-209ENST00000541102 RETREG3Q86VR2 466 aa12.97□□□□□ -0.33
LTBR-209ENST00000541102 TREML1Q86YW5 311 aa12.97□□□□□ -0.33
LTBR-209ENST00000541102 MSRB3Q8IXL7 192 aa12.97□□□□□ -0.33
LTBR-209ENST00000541102 LILRB4Q8NHJ6 448 aa12.97□□□□□ -0.33
LTBR-209ENST00000541102 PIK3R3Q92569 461 aa12.97□□□□□ -0.33
LTBR-209ENST00000541102 HOXB13Q92826 284 aaPredicted RBP12.97□□□□□ -0.33
LTBR-209ENST00000541102 EFHD2Q96C19 240 aaPredicted RBP12.97□□□□□ -0.33
LTBR-209ENST00000541102 AURKBQ96GD4 344 aaPredicted RBP12.97□□□□□ -0.33
LTBR-209ENST00000541102 MS4A4EQ96PG1 132 aa12.97□□□□□ -0.33
LTBR-209ENST00000541102 TTYH2Q9BSA4 534 aa12.97□□□□□ -0.33
LTBR-209ENST00000541102 LMF2Q9BU23 707 aaKnown RBP12.97□□□□□ -0.33
LTBR-209ENST00000541102 PAIP1Q9H074 479 aaKnown RBP12.97□□□□□ -0.33
LTBR-209ENST00000541102 NSRP1Q9H0G5 558 aaKnown RBP12.97□□□□□ -0.33
LTBR-209ENST00000541102 C3orf14Q9HBI5 128 aa12.97□□□□□ -0.33
LTBR-209ENST00000541102 FAM215AQ9Y5M1 114 aa12.97□□□□□ -0.33
LTBR-209ENST00000541102 EXPH5Q8NEV8 1989 aa12.97□□□□□ -0.33
LTBR-209ENST00000541102 CRYBG3Q68DQ2 2970 aa12.96□□□□□ -0.33
LTBR-209ENST00000541102 ABCA12Q86UK0 2595 aa12.96□□□□□ -0.33
LTBR-209ENST00000541102 RNF103-CHMP3A0A140T963 221 aa12.96□□□□□ -0.33
LTBR-209ENST00000541102 NKX2-6A6NCS4 301 aa12.96□□□□□ -0.33
LTBR-209ENST00000541102 OR6C70A6NIJ9 312 aa12.96□□□□□ -0.33
LTBR-209ENST00000541102 FBP2O00757 339 aa12.96□□□□□ -0.33
LTBR-209ENST00000541102 TSPAN2O60636 221 aa12.96□□□□□ -0.33
LTBR-209ENST00000541102 IGKV1D-16P01601 117 aa12.96□□□□□ -0.33
LTBR-209ENST00000541102 ELAVL4P26378 380 aaKnown RBP12.96□□□□□ -0.33
LTBR-209ENST00000541102 GABRA3P34903 492 aa12.96□□□□□ -0.33
LTBR-209ENST00000541102 SNTA1Q13424 505 aa12.96□□□□□ -0.33
LTBR-209ENST00000541102 EFR3AQ14156 821 aa12.96□□□□□ -0.33
LTBR-209ENST00000541102 WIPI1Q5MNZ9 446 aaPredicted RBP12.96□□□□□ -0.33
LTBR-209ENST00000541102 SAXO2Q658L1 398 aa12.96□□□□□ -0.33
LTBR-209ENST00000541102 ZNF621Q6ZSS3 439 aa12.96□□□□□ -0.33
LTBR-209ENST00000541102 OLIG3Q7RTU3 272 aa12.96□□□□□ -0.33
LTBR-209ENST00000541102 C6orf120Q7Z4R8 191 aa12.96□□□□□ -0.33
LTBR-209ENST00000541102 OR5D16Q8NGK9 328 aa12.96□□□□□ -0.33
LTBR-209ENST00000541102 SFXN5Q8TD22 340 aa12.96□□□□□ -0.33
LTBR-209ENST00000541102 SLC35A4Q96G79 324 aa12.96□□□□□ -0.33
LTBR-209ENST00000541102 PANX1Q96RD7 426 aa12.96□□□□□ -0.33
LTBR-209ENST00000541102 SLC35A5Q9BS91 424 aa12.96□□□□□ -0.33
LTBR-209ENST00000541102 MYLK2Q9H1R3 596 aa12.96□□□□□ -0.33
LTBR-209ENST00000541102 UBQLN3Q9H347 655 aa12.96□□□□□ -0.33
LTBR-209ENST00000541102 NEUROD4Q9HD90 331 aa12.96□□□□□ -0.33
LTBR-209ENST00000541102 KCNJ16Q9NPI9 418 aa12.96□□□□□ -0.33
LTBR-209ENST00000541102 FBXO34Q9NWN3 711 aa12.96□□□□□ -0.33
LTBR-209ENST00000541102 SLC25A37Q9NYZ2 338 aa12.96□□□□□ -0.33
LTBR-209ENST00000541102 FLRT3Q9NZU0 649 aa12.96□□□□□ -0.33
LTBR-209ENST00000541102 CAMK2AQ9UQM7 478 aa12.96□□□□□ -0.33
LTBR-209ENST00000541102 PHF3Q92576 2039 aaKnown RBP12.95□□□□□ -0.34
LTBR-209ENST00000541102 A0A0G2JNJ9 132 aa12.95□□□□□ -0.34
LTBR-209ENST00000541102 A0A1W2PP18 115 aa12.95□□□□□ -0.34
LTBR-209ENST00000541102 RFXANKO14593 260 aa12.95□□□□□ -0.34
LTBR-209ENST00000541102 SNPHO15079 494 aa12.95□□□□□ -0.34
LTBR-209ENST00000541102 ABCB7O75027 752 aa12.95□□□□□ -0.34
LTBR-209ENST00000541102 HOXD4P09016 255 aaPredicted RBP12.95□□□□□ -0.34
LTBR-209ENST00000541102 GABRA1P14867 456 aa12.95□□□□□ -0.34
LTBR-209ENST00000541102 UQCRC2P22695 453 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 84.1 ms