RNA–Protein interactions for RNA: ENST00000540963.1

CHFR-218, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 2

Gene CHFR, Length 875 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-218ENST00000540963 Q9N2J8 555 aa23.99■■□□□ 1.43
CHFR-218ENST00000540963 MCTS1Q9ULC4 181 aaKnown RBP23.99■■□□□ 1.43
CHFR-218ENST00000540963 C19orf53Q9UNZ5 99 aaPredicted RBP23.99■■□□□ 1.43
CHFR-218ENST00000540963 MANBAO00462 879 aa23.98■■□□□ 1.43
CHFR-218ENST00000540963 OR4F21O95013 312 aa23.98■■□□□ 1.43
CHFR-218ENST00000540963 EIF1AXP47813 144 aaKnown RBP23.98■■□□□ 1.43
CHFR-218ENST00000540963 SLC6A8P48029 635 aa23.98■■□□□ 1.43
CHFR-218ENST00000540963 RASA2Q15283 850 aa23.98■■□□□ 1.43
CHFR-218ENST00000540963 WHAMMP3Q1A5X7 153 aa23.98■■□□□ 1.43
CHFR-218ENST00000540963 SH2D4BQ5SQS7 431 aa23.98■■□□□ 1.43
CHFR-218ENST00000540963 RPS27LQ71UM5 84 aaKnown RBP23.98■■□□□ 1.43
CHFR-218ENST00000540963 EXOC3L1Q86VI1 746 aa23.98■■□□□ 1.43
CHFR-218ENST00000540963 WFDC8Q8IUA0 241 aa23.98■■□□□ 1.43
CHFR-218ENST00000540963 C16orf78Q8WTQ4 265 aa23.98■■□□□ 1.43
CHFR-218ENST00000540963 BBS4Q96RK4 519 aa23.98■■□□□ 1.43
CHFR-218ENST00000540963 FLRT3Q9NZU0 649 aa23.98■■□□□ 1.43
CHFR-218ENST00000540963 MYO1GB0I1T2 1018 aa23.97■■□□□ 1.43
CHFR-218ENST00000540963 EIF1AYO14602 144 aaKnown RBP23.97■■□□□ 1.43
CHFR-218ENST00000540963 ULK1O75385 1050 aa23.97■■□□□ 1.43
CHFR-218ENST00000540963 PSMG1O95456 288 aa23.97■■□□□ 1.43
CHFR-218ENST00000540963 HSD17B3P37058 310 aa23.97■■□□□ 1.43
CHFR-218ENST00000540963 PRR5P85299 388 aa23.97■■□□□ 1.43
CHFR-218ENST00000540963 CLCQ05315 142 aa23.97■■□□□ 1.43
CHFR-218ENST00000540963 ACSM2AQ08AH3 577 aa23.97■■□□□ 1.43
CHFR-218ENST00000540963 ACSM2BQ68CK6 577 aa23.97■■□□□ 1.43
CHFR-218ENST00000540963 WDR75Q8IWA0 830 aaKnown RBP23.97■■□□□ 1.43
CHFR-218ENST00000540963 STEAP2Q8NFT2 490 aa23.97■■□□□ 1.43
CHFR-218ENST00000540963 C11orf24Q96F05 449 aaPredicted RBP23.97■■□□□ 1.43
CHFR-218ENST00000540963 HDHD5Q9BXW7 423 aa23.97■■□□□ 1.43
CHFR-218ENST00000540963 TBL1XR1Q9BZK7 514 aa23.97■■□□□ 1.43
CHFR-218ENST00000540963 CDC42EP4Q9H3Q1 356 aaKnown RBP23.97■■□□□ 1.43
CHFR-218ENST00000540963 SIRT5Q9NXA8 310 aa23.97■■□□□ 1.43
CHFR-218ENST00000540963 GRID1Q9ULK0 1009 aa23.97■■□□□ 1.43
CHFR-218ENST00000540963 TTC36A6NLP5 189 aa23.96■■□□□ 1.43
CHFR-218ENST00000540963 A8MT66 165 aa23.96■■□□□ 1.43
CHFR-218ENST00000540963 CD5LO43866 347 aa23.96■■□□□ 1.43
CHFR-218ENST00000540963 TIA1P31483 386 aaKnown RBP eCLIP23.96■■□□□ 1.43
CHFR-218ENST00000540963 ZNHIT3Q15649 155 aaPredicted RBP23.96■■□□□ 1.43
CHFR-218ENST00000540963 MARCH3Q86UD3 253 aa23.96■■□□□ 1.43
CHFR-218ENST00000540963 CDYL2Q8N8U2 506 aa23.96■■□□□ 1.43
CHFR-218ENST00000540963 OR10D3Q8NH80 312 aa23.96■■□□□ 1.43
CHFR-218ENST00000540963 TMEM158Q8WZ71 300 aa23.96■■□□□ 1.43
CHFR-218ENST00000540963 FBXW5Q969U6 566 aa23.96■■□□□ 1.43
CHFR-218ENST00000540963 ADGRG7Q96K78 797 aa23.96■■□□□ 1.43
CHFR-218ENST00000540963 TACO1Q9BSH4 297 aaKnown RBP23.96■■□□□ 1.43
CHFR-218ENST00000540963 TAS2R7Q9NYW3 318 aa23.96■■□□□ 1.43
CHFR-218ENST00000540963 RNF115Q9Y4L5 304 aa23.96■■□□□ 1.43
CHFR-218ENST00000540963 SNX8Q9Y5X2 465 aa23.96■■□□□ 1.43
CHFR-218ENST00000540963 A0A087WZY1 265 aa23.95■■□□□ 1.42
CHFR-218ENST00000540963 ADAMDEC1O15204 470 aa23.95■■□□□ 1.42
CHFR-218ENST00000540963 IFI6P09912 130 aa23.95■■□□□ 1.42
CHFR-218ENST00000540963 TSPAN8P19075 237 aa23.95■■□□□ 1.42
CHFR-218ENST00000540963 DDCP20711 480 aa23.95■■□□□ 1.42
CHFR-218ENST00000540963 SERPINB9P50453 376 aa23.95■■□□□ 1.42
CHFR-218ENST00000540963 LGSNQ5TDP6 509 aa23.95■■□□□ 1.42
CHFR-218ENST00000540963 GTF2IRD2BQ6EKJ0 949 aa23.95■■□□□ 1.42
CHFR-218ENST00000540963 DNAJC14Q6Y2X3 702 aaPredicted RBP23.95■■□□□ 1.42
CHFR-218ENST00000540963 GTF2IRD2Q86UP8 949 aa23.95■■□□□ 1.42
CHFR-218ENST00000540963 PHC2Q8IXK0 858 aa23.95■■□□□ 1.42
CHFR-218ENST00000540963 OR2L13Q8N349 312 aa23.95■■□□□ 1.42
CHFR-218ENST00000540963 ZNF382Q96SR6 550 aa23.95■■□□□ 1.42
CHFR-218ENST00000540963 LMF2Q9BU23 707 aaKnown RBP23.95■■□□□ 1.42
CHFR-218ENST00000540963 ACPTQ9BZG2 426 aa23.95■■□□□ 1.42
CHFR-218ENST00000540963 C3orf14Q9HBI5 128 aa23.95■■□□□ 1.42
CHFR-218ENST00000540963 NGBQ9NPG2 151 aa23.95■■□□□ 1.42
CHFR-218ENST00000540963 CLEC4AQ9UMR7 237 aa23.95■■□□□ 1.42
CHFR-218ENST00000540963 C7orf72A4D263 438 aa23.94■■□□□ 1.42
CHFR-218ENST00000540963 SYNGR4O95473 234 aa23.94■■□□□ 1.42
CHFR-218ENST00000540963 ANGPTL1O95841 491 aa23.94■■□□□ 1.42
CHFR-218ENST00000540963 THBS1P07996 1170 aa23.94■■□□□ 1.42
CHFR-218ENST00000540963 INHBAP08476 426 aa23.94■■□□□ 1.42
CHFR-218ENST00000540963 DANCRP0C864 163 aa23.94■■□□□ 1.42
CHFR-218ENST00000540963 CHN1P15882 459 aa23.94■■□□□ 1.42
CHFR-218ENST00000540963 TCHHL1Q5QJ38 904 aaPredicted RBP23.94■■□□□ 1.42
CHFR-218ENST00000540963 FAM219BQ5XKK7 198 aa23.94■■□□□ 1.42
CHFR-218ENST00000540963 PPP4R4Q6NUP7 873 aa23.94■■□□□ 1.42
CHFR-218ENST00000540963 GTPBP8Q8N3Z3 284 aaPredicted RBP23.94■■□□□ 1.42
CHFR-218ENST00000540963 TMEM151AQ8N4L1 468 aa23.94■■□□□ 1.42
CHFR-218ENST00000540963 MAPK1IP1LQ8NDC0 245 aa23.94■■□□□ 1.42
CHFR-218ENST00000540963 LILRB1Q8NHL6 650 aaPredicted RBP23.94■■□□□ 1.42
CHFR-218ENST00000540963 USB1Q9BQ65 265 aaKnown RBP23.94■■□□□ 1.42
CHFR-218ENST00000540963 LRTM1Q9HBL6 345 aa23.94■■□□□ 1.42
CHFR-218ENST00000540963 CUBNO60494 3623 aa23.93■■□□□ 1.42
CHFR-218ENST00000540963 UPK1AO00322 258 aa23.93■■□□□ 1.42
CHFR-218ENST00000540963 TUBBP07437 444 aa23.93■■□□□ 1.42
CHFR-218ENST00000540963 NCBP2P52298 156 aaKnown RBP eCLIP23.93■■□□□ 1.422e-6■■□□□ 12.6
CHFR-218ENST00000540963 RAC1P63000 192 aa23.93■■□□□ 1.42
CHFR-218ENST00000540963 CTU2Q2VPK5 515 aaKnown RBP23.93■■□□□ 1.42
CHFR-218ENST00000540963 DNM1P46Q6ZS02 220 aa23.93■■□□□ 1.42
CHFR-218ENST00000540963 ESPNLQ6ZVH7 1005 aa23.93■■□□□ 1.42
CHFR-218ENST00000540963 RAB3IL1Q8TBN0 382 aa23.93■■□□□ 1.42
CHFR-218ENST00000540963 ZBTB8AQ96BR9 441 aa23.93■■□□□ 1.42
CHFR-218ENST00000540963 APIPQ96GX9 242 aa23.93■■□□□ 1.42
CHFR-218ENST00000540963 ESRP2Q9H6T0 727 aaKnown RBP23.93■■□□□ 1.42
CHFR-218ENST00000540963 DDX18Q9NVP1 670 aaKnown RBP23.93■■□□□ 1.42
CHFR-218ENST00000540963 STK38LQ9Y2H1 464 aa23.93■■□□□ 1.42
CHFR-218ENST00000540963 UTS2O95399 124 aa23.92■■□□□ 1.42
CHFR-218ENST00000540963 JUNP05412 331 aaKnown RBP23.92■■□□□ 1.42
CHFR-218ENST00000540963 SBK3P0C264 359 aa23.92■■□□□ 1.42
CHFR-218ENST00000540963 HMOX2P30519 316 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms