RNA–Protein interactions for RNA: ENST00000540805.5

PROM1-220, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-220ENST00000540805 SRFBP1Q8NEF9 429 aaKnown RBP4.92□□□□□ -1.62
PROM1-220ENST00000540805 OR52L1Q8NGH7 329 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 C2CD4CQ8TF44 421 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 CREB3L1Q96BA8 519 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 CXorf58Q96LI9 332 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 TMEM175Q9BSA9 504 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 TMEM43Q9BTV4 400 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 KATNB1Q9BVA0 655 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 OR8D2Q9GZM6 311 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 MED28Q9H204 178 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 FOLH1BQ9HBA9 442 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 MRPS30Q9NP92 439 aaKnown RBP4.92□□□□□ -1.62
PROM1-220ENST00000540805 RDH8Q9NYR8 311 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 HCN3Q9P1Z3 774 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 ADAM30Q9UKF2 790 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 ERVK-19Q9WJR5 959 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 ENPP4Q9Y6X5 453 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 PRAMEF33A0A0G2JMD5 474 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 A0A1W2PPC1 479 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 SERTM1A2A2V5 107 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 ZNF840PA6NDX5 716 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 PRAMEF25A6NGN4 478 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 FAM170BA6NMN3 283 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 CASKO14936 926 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 KHNYNO15037 678 aaKnown RBP4.92□□□□□ -1.62
PROM1-220ENST00000540805 BET1O15155 118 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 PRAMEF10O60809 474 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 PSIP1O75475 530 aaKnown RBP4.92□□□□□ -1.62
PROM1-220ENST00000540805 ABLIM3O94929 683 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 SOX14O95416 240 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 RAB36O95755 333 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 PLGP00747 810 aaPredicted RBP4.92□□□□□ -1.62
PROM1-220ENST00000540805 ADAP00813 363 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 OSMP13725 252 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 CPEP16870 476 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 ACRV1P26436 265 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 PTBP1P26599 531 aaKnown RBP eCLIP4.92□□□□□ -1.629e-9■■■■■ 30.3
PROM1-220ENST00000540805 ASMTP46597 345 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 LIMS1P48059 325 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 TAS2R41P59536 307 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 RBBP4Q09028 425 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 EXOSC2Q13868 293 aaKnown RBP4.92□□□□□ -1.62
PROM1-220ENST00000540805 SLBPQ14493 270 aaKnown RBP eCLIP4.92□□□□□ -1.62
PROM1-220ENST00000540805 CRTC2Q53ET0 693 aaPredicted RBP4.92□□□□□ -1.62
PROM1-220ENST00000540805 CDKL4Q5MAI5 379 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 RNLSQ5VYX0 342 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 SMARCD3Q6STE5 483 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 SLC16A13Q7RTY0 426 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 KIAA0907Q7Z7F0 614 aaPredicted RBP4.92□□□□□ -1.62
PROM1-220ENST00000540805 LRRTM4Q86VH4 590 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 ANKRD53Q8N9V6 530 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 BEST4Q8NFU0 473 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 TMEM163Q8TC26 289 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 C1GALT1C1Q96EU7 318 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 OR51B5Q9H339 312 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 LMAN1LQ9HAT1 526 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 B3GAT2Q9NPZ5 323 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 RHCGQ9UBD6 479 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 TBX21Q9UL17 535 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 MGAT4AQ9UM21 535 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 MTCL1Q9Y4B5 1905 aaKnown RBP4.92□□□□□ -1.62
PROM1-220ENST00000540805 PIKFYVEQ9Y2I7 2098 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 IGLON5A6NGN9 336 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 SGK494L7N484 410 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 PEX12O00623 359 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 OR5F1O95221 314 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 EGFP01133 1207 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 TNFP01375 233 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 F11P03951 625 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 RAF1P04049 648 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 IFNW1P05000 195 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 TPOP07202 933 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 CBSLP0DN79 551 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 JUPP14923 745 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 CBR1P16152 277 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 RHCEP18577 417 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 CXCL3P19876 107 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 CBSP35520 551 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 IFNGR2P38484 337 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 HMGA2P52926 109 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 C21orf58P58505 322 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 BTG1P62324 171 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 RPS25P62851 125 aaKnown RBP4.92□□□□□ -1.62
PROM1-220ENST00000540805 RING1Q06587 406 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 CRYZQ08257 329 aaKnown RBP4.92□□□□□ -1.62
PROM1-220ENST00000540805 LMAN2Q12907 356 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 ZNF273Q14593 569 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 HEPACAMQ14CZ8 416 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 P2RY14Q15391 338 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 DHCR24Q15392 516 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 FCN2Q15485 313 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 ALG11Q2TAA5 492 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 COL28A1Q2UY09 1125 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 LEXMQ3ZCV2 418 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 PLK5Q496M5 336 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 ARHGAP40Q5TG30 622 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 MZT2AQ6P582 158 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 B3GLCTQ6Y288 498 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 ZFP82Q8N141 532 aa4.92□□□□□ -1.62
PROM1-220ENST00000540805 TCEANCQ8N8B7 351 aa4.92□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms