RNA–Protein interactions for RNA: ENST00000540608.5

NPC1-202, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 2

Gene NPC1, Length 2,790 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-202ENST00000540608 CYSLTR2Q9NS75 346 aa11.49□□□□□ -0.57
NPC1-202ENST00000540608 PTGFRNQ9P2B2 879 aa11.49□□□□□ -0.57
NPC1-202ENST00000540608 ACSL5Q9ULC5 683 aa11.49□□□□□ -0.57
NPC1-202ENST00000540608 CSNK1G3Q9Y6M4 447 aa11.49□□□□□ -0.57
NPC1-202ENST00000540608 HEATR5BQ9P2D3 2071 aa11.48□□□□□ -0.57
NPC1-202ENST00000540608 SOCS6O14544 535 aa11.48□□□□□ -0.57
NPC1-202ENST00000540608 ADH1CP00326 375 aa11.48□□□□□ -0.57
NPC1-202ENST00000540608 STATHP02808 62 aa11.48□□□□□ -0.57
NPC1-202ENST00000540608 PCCBP05166 539 aa11.48□□□□□ -0.57
NPC1-202ENST00000540608 NDUFV2P19404 249 aa11.48□□□□□ -0.57
NPC1-202ENST00000540608 SLC6A1P30531 599 aa11.48□□□□□ -0.57
NPC1-202ENST00000540608 ATP12AP54707 1039 aa11.48□□□□□ -0.57
NPC1-202ENST00000540608 P2RX3P56373 397 aa11.48□□□□□ -0.57
NPC1-202ENST00000540608 ARPC4P59998 168 aa11.48□□□□□ -0.57
NPC1-202ENST00000540608 FAM214AQ32MH5 1076 aa11.48□□□□□ -0.57
NPC1-202ENST00000540608 C6orf132Q5T0Z8 1188 aa11.48□□□□□ -0.57
NPC1-202ENST00000540608 C18orf63Q68DL7 685 aa11.48□□□□□ -0.57
NPC1-202ENST00000540608 SLC48A1Q6P1K1 146 aa11.48□□□□□ -0.57
NPC1-202ENST00000540608 SMARCD3Q6STE5 483 aa11.48□□□□□ -0.57
NPC1-202ENST00000540608 PLEKHM3Q6ZWE6 761 aa11.48□□□□□ -0.57
NPC1-202ENST00000540608 NR2C2APQ86WQ0 139 aa11.48□□□□□ -0.57
NPC1-202ENST00000540608 CPOQ8IVL8 374 aa11.48□□□□□ -0.57
NPC1-202ENST00000540608 ETFBKMTQ8IXQ9 262 aa11.48□□□□□ -0.57
NPC1-202ENST00000540608 SIRT6Q8N6T7 355 aa11.48□□□□□ -0.57
NPC1-202ENST00000540608 TOR1AIP2Q8NFQ8 470 aa11.48□□□□□ -0.57
NPC1-202ENST00000540608 OR5M3Q8NGP4 307 aa11.48□□□□□ -0.57
NPC1-202ENST00000540608 ANGPTL6Q8NI99 470 aa11.48□□□□□ -0.57
NPC1-202ENST00000540608 SPPL3Q8TCT6 385 aa11.48□□□□□ -0.57
NPC1-202ENST00000540608 TTC9Q92623 222 aa11.48□□□□□ -0.57
NPC1-202ENST00000540608 SLC41A3Q96GZ6 507 aa11.48□□□□□ -0.57
NPC1-202ENST00000540608 GFM1Q96RP9 751 aaKnown RBP11.48□□□□□ -0.57
NPC1-202ENST00000540608 MCHR1Q99705 422 aa11.48□□□□□ -0.57
NPC1-202ENST00000540608 TRMT61BQ9BVS5 477 aaKnown RBP11.48□□□□□ -0.57
NPC1-202ENST00000540608 EQTNQ9NQ60 294 aa11.48□□□□□ -0.57
NPC1-202ENST00000540608 HINT3Q9NQE9 182 aaKnown RBP11.48□□□□□ -0.57
NPC1-202ENST00000540608 BABAM2Q9NXR7 383 aa11.48□□□□□ -0.57
NPC1-202ENST00000540608 NTNG1Q9Y2I2 539 aa11.48□□□□□ -0.57
NPC1-202ENST00000540608 INSL6Q9Y581 213 aa11.48□□□□□ -0.57
NPC1-202ENST00000540608 A0A1W2PS29 197 aa11.48□□□□□ -0.57
NPC1-202ENST00000540608 SMLR1H3BR10 107 aa11.48□□□□□ -0.57
NPC1-202ENST00000540608 OR5F1O95221 314 aa11.48□□□□□ -0.57
NPC1-202ENST00000540608 F3P13726 295 aa11.48□□□□□ -0.57
NPC1-202ENST00000540608 HK1P19367 917 aa11.48□□□□□ -0.57
NPC1-202ENST00000540608 EVI2BP34910 448 aa11.48□□□□□ -0.57
NPC1-202ENST00000540608 P2RY2P41231 377 aa11.48□□□□□ -0.57
NPC1-202ENST00000540608 MC3RP41968 323 aa11.48□□□□□ -0.57
NPC1-202ENST00000540608 RGS8P57771 180 aaPredicted RBP11.48□□□□□ -0.57
NPC1-202ENST00000540608 SNRPD2P62316 118 aaKnown RBP11.48□□□□□ -0.57
NPC1-202ENST00000540608 GPR176Q14439 515 aa11.48□□□□□ -0.57
NPC1-202ENST00000540608 MLF2Q15773 248 aaPredicted RBP11.48□□□□□ -0.57
NPC1-202ENST00000540608 HBMQ6B0K9 141 aa11.48□□□□□ -0.57
NPC1-202ENST00000540608 CXXC5Q7LFL8 322 aaKnown RBP11.48□□□□□ -0.57
NPC1-202ENST00000540608 C16orf62Q7Z3J2 963 aa11.48□□□□□ -0.57
NPC1-202ENST00000540608 LRRC28Q86X40 367 aaPredicted RBP11.48□□□□□ -0.57
NPC1-202ENST00000540608 ACBD7Q8N6N7 88 aa11.48□□□□□ -0.57
NPC1-202ENST00000540608 HYLS1Q96M11 299 aa11.48□□□□□ -0.57
NPC1-202ENST00000540608 NECTIN4Q96NY8 510 aa11.48□□□□□ -0.57
NPC1-202ENST00000540608 INSM2Q96T92 566 aaPredicted RBP11.48□□□□□ -0.57
NPC1-202ENST00000540608 XKR8Q9H6D3 395 aa11.48□□□□□ -0.57
NPC1-202ENST00000540608 FOLH1BQ9HBA9 442 aa11.48□□□□□ -0.57
NPC1-202ENST00000540608 MRPS23Q9Y3D9 190 aaKnown RBP11.48□□□□□ -0.57
NPC1-202ENST00000540608 HSPB11Q9Y547 144 aa11.48□□□□□ -0.57
NPC1-202ENST00000540608 GSAPA4D1B5 854 aa11.47□□□□□ -0.57
NPC1-202ENST00000540608 DVL2O14641 736 aa11.47□□□□□ -0.57
NPC1-202ENST00000540608 PIP5K1CO60331 668 aa11.47□□□□□ -0.57
NPC1-202ENST00000540608 RFX3P48380 749 aa11.47□□□□□ -0.57
NPC1-202ENST00000540608 RAB28P51157 221 aa11.47□□□□□ -0.57
NPC1-202ENST00000540608 CEBPEQ15744 281 aa11.47□□□□□ -0.57
NPC1-202ENST00000540608 PLA1AQ53H76 456 aa11.47□□□□□ -0.57
NPC1-202ENST00000540608 RTL10Q7L3V2 364 aa11.47□□□□□ -0.57
NPC1-202ENST00000540608 GID4Q8IVV7 300 aa11.47□□□□□ -0.57
NPC1-202ENST00000540608 OR2L5Q8NG80 312 aa11.47□□□□□ -0.57
NPC1-202ENST00000540608 OR4M1Q8NGD0 313 aa11.47□□□□□ -0.57
NPC1-202ENST00000540608 OR51G2Q8NGK0 314 aa11.47□□□□□ -0.57
NPC1-202ENST00000540608 OR9A2Q8NGT5 310 aa11.47□□□□□ -0.57
NPC1-202ENST00000540608 TMEM255BQ8WV15 326 aa11.47□□□□□ -0.57
NPC1-202ENST00000540608 KCTD12Q96CX2 325 aaKnown RBP11.47□□□□□ -0.57
NPC1-202ENST00000540608 SAMD8Q96LT4 415 aa11.47□□□□□ -0.57
NPC1-202ENST00000540608 C12orf66Q96MD2 445 aa11.47□□□□□ -0.57
NPC1-202ENST00000540608 THAP7Q9BT49 309 aaPredicted RBP11.47□□□□□ -0.57
NPC1-202ENST00000540608 ACTRT3Q9BYD9 372 aa11.47□□□□□ -0.57
NPC1-202ENST00000540608 IL20RAQ9UHF4 553 aa11.47□□□□□ -0.57
NPC1-202ENST00000540608 ZFR2Q9UPR6 939 aaKnown RBP11.47□□□□□ -0.57
NPC1-202ENST00000540608 UNC80Q8N2C7 3258 aa11.47□□□□□ -0.57
NPC1-202ENST00000540608 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.47□□□□□ -0.57
NPC1-202ENST00000540608 FCMRO60667 390 aa11.47□□□□□ -0.57
NPC1-202ENST00000540608 ZIC2O95409 532 aaPredicted RBP11.47□□□□□ -0.57
NPC1-202ENST00000540608 NFATC1O95644 943 aa11.47□□□□□ -0.57
NPC1-202ENST00000540608 CAMK1Q14012 370 aa11.47□□□□□ -0.57
NPC1-202ENST00000540608 LRRC32Q14392 662 aa11.47□□□□□ -0.57
NPC1-202ENST00000540608 ZNF234Q14588 700 aa11.47□□□□□ -0.57
NPC1-202ENST00000540608 GAB4Q2WGN9 574 aa11.47□□□□□ -0.57
NPC1-202ENST00000540608 B3GLCTQ6Y288 498 aa11.47□□□□□ -0.57
NPC1-202ENST00000540608 FAM20CQ8IXL6 584 aa11.47□□□□□ -0.57
NPC1-202ENST00000540608 RAB7BQ96AH8 199 aa11.47□□□□□ -0.57
NPC1-202ENST00000540608 ZNF707Q96C28 371 aaPredicted RBP11.47□□□□□ -0.57
NPC1-202ENST00000540608 GIMAP5Q96F15 307 aa11.47□□□□□ -0.57
NPC1-202ENST00000540608 SLC35A4Q96G79 324 aa11.47□□□□□ -0.57
NPC1-202ENST00000540608 ZNF681Q96N22 645 aa11.47□□□□□ -0.57
NPC1-202ENST00000540608 FCRL4Q96PJ5 515 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms